Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam

Whereas low levels of thermal stress, irradiance, and dietary restriction can have beneficial effects for many taxa, stress acclimation remains understudied in marine invertebrates, despite being threatened by climate change stressors such as ocean acidification. To test for life-stage and stress-in...

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Main Authors: Gurr, Samuel J, Trigg, Shelly A, Vadopalas, Brent, Pastore, P, Putnam, H M
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
pH
Run
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.941416
https://doi.org/10.1594/PANGAEA.941416
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.941416
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.941416 2024-09-15T18:28:06+00:00 Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam Gurr, Samuel J Trigg, Shelly A Vadopalas, Brent Pastore, P Putnam, H M DATE/TIME START: 2019-07-04T00:00:00 * DATE/TIME END: 2019-08-14T00:00:00 2021 text/tab-separated-values, 39178 data points https://doi.pangaea.de/10.1594/PANGAEA.941416 https://doi.org/10.1594/PANGAEA.941416 en eng PANGAEA Gurr, Samuel J; Trigg, Shelly A; Vadopalas, Brent; Roberts, Steven B; Putnam, H M (2021): Repeat exposure to hypercapnic seawater modifies growth and oxidative status in a tolerant burrowing clam. Journal of Experimental Biology, 224(13), https://doi.org/10.1242/jeb.233932 Gurr, Samuel J; Trigg, Shelly A; Vadopalas, Brent; Roberts, Steven B; Putnam, H M (2020): Repeat exposure to hypercapnic seawater modifies performance and oxidative status in a tolerant burrowing clam [dataset]. Zenodo, https://doi.org/10.5281/zenodo.3903019 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.941416 https://doi.org/10.1594/PANGAEA.941416 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Animalia Aragonite saturation state Ash free dry mass Benthic animals Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Copper reducing equivalents per protein DATE/TIME Day of experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Identification Individuals Laboratory experiment Mollusca North Pacific OA-ICC Ocean Acidification International Coordination Centre Other studied parameter or process Panopea generosa Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Position Protein/dry weight ratio Registration number of species Respiration Respiration rate oxygen per individual Run Salinity dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.94141610.1242/jeb.23393210.5281/zenodo.3903019 2024-07-24T02:31:34Z Whereas low levels of thermal stress, irradiance, and dietary restriction can have beneficial effects for many taxa, stress acclimation remains understudied in marine invertebrates, despite being threatened by climate change stressors such as ocean acidification. To test for life-stage and stress-intensity dependence in eliciting enhanced tolerance under subsequent stress encounters, we initially conditioned pediveliger Pacific geoduck (Panopea generosa) larvae to (i) ambient and moderately elevated pCO2 (920 µatm and 2800 µatm, respectively) for 110 days, (ii) secondarily applied a 7-day exposure to ambient, moderate, and severely elevated pCO2 (750 µatm, 2800 µatm, and 4900 µatm, respectively), followed by 7 days in ambient conditions, and (iii) implemented a 7-day third exposure to ambient (970 µatm) and moderate pCO2 (3000 µatm). Initial conditioning to moderate pCO2 stress followed by second and third exposure to severe and moderate pCO2 stress increased respiration rate, organic biomass, and shell size suggesting a stress-intensity-dependent effect on energetics. Additionally, stress-acclimated clams had lower antioxidant capacity compared to clams under ambient conditions, supporting the hypothesis that stress over postlarval-to-juvenile development affects oxidative status later in life. Time series and stress intensity-specific approaches can reveal life-stages and magnitudes of exposure, respectively, that may elicit beneficial phenotypic variation. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Ash free dry mass
Benthic animals
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Copper reducing equivalents
per protein
DATE/TIME
Day of experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Identification
Individuals
Laboratory experiment
Mollusca
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Other studied parameter or process
Panopea generosa
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Position
Protein/dry weight ratio
Registration number of species
Respiration
Respiration rate
oxygen
per individual
Run
Salinity
spellingShingle Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Ash free dry mass
Benthic animals
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Copper reducing equivalents
per protein
DATE/TIME
Day of experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Identification
Individuals
Laboratory experiment
Mollusca
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Other studied parameter or process
Panopea generosa
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Position
Protein/dry weight ratio
Registration number of species
Respiration
Respiration rate
oxygen
per individual
Run
Salinity
Gurr, Samuel J
Trigg, Shelly A
Vadopalas, Brent
Pastore, P
Putnam, H M
Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
topic_facet Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Ash free dry mass
Benthic animals
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Copper reducing equivalents
per protein
DATE/TIME
Day of experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Identification
Individuals
Laboratory experiment
Mollusca
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Other studied parameter or process
Panopea generosa
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Position
Protein/dry weight ratio
Registration number of species
Respiration
Respiration rate
oxygen
per individual
Run
Salinity
description Whereas low levels of thermal stress, irradiance, and dietary restriction can have beneficial effects for many taxa, stress acclimation remains understudied in marine invertebrates, despite being threatened by climate change stressors such as ocean acidification. To test for life-stage and stress-intensity dependence in eliciting enhanced tolerance under subsequent stress encounters, we initially conditioned pediveliger Pacific geoduck (Panopea generosa) larvae to (i) ambient and moderately elevated pCO2 (920 µatm and 2800 µatm, respectively) for 110 days, (ii) secondarily applied a 7-day exposure to ambient, moderate, and severely elevated pCO2 (750 µatm, 2800 µatm, and 4900 µatm, respectively), followed by 7 days in ambient conditions, and (iii) implemented a 7-day third exposure to ambient (970 µatm) and moderate pCO2 (3000 µatm). Initial conditioning to moderate pCO2 stress followed by second and third exposure to severe and moderate pCO2 stress increased respiration rate, organic biomass, and shell size suggesting a stress-intensity-dependent effect on energetics. Additionally, stress-acclimated clams had lower antioxidant capacity compared to clams under ambient conditions, supporting the hypothesis that stress over postlarval-to-juvenile development affects oxidative status later in life. Time series and stress intensity-specific approaches can reveal life-stages and magnitudes of exposure, respectively, that may elicit beneficial phenotypic variation.
format Dataset
author Gurr, Samuel J
Trigg, Shelly A
Vadopalas, Brent
Pastore, P
Putnam, H M
author_facet Gurr, Samuel J
Trigg, Shelly A
Vadopalas, Brent
Pastore, P
Putnam, H M
author_sort Gurr, Samuel J
title Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
title_short Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
title_full Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
title_fullStr Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
title_full_unstemmed Seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
title_sort seawater carbonate chemistry and performance and oxidative status in a tolerant burrowing clam
publisher PANGAEA
publishDate 2021
url https://doi.pangaea.de/10.1594/PANGAEA.941416
https://doi.org/10.1594/PANGAEA.941416
op_coverage DATE/TIME START: 2019-07-04T00:00:00 * DATE/TIME END: 2019-08-14T00:00:00
genre Ocean acidification
genre_facet Ocean acidification
op_relation Gurr, Samuel J; Trigg, Shelly A; Vadopalas, Brent; Roberts, Steven B; Putnam, H M (2021): Repeat exposure to hypercapnic seawater modifies growth and oxidative status in a tolerant burrowing clam. Journal of Experimental Biology, 224(13), https://doi.org/10.1242/jeb.233932
Gurr, Samuel J; Trigg, Shelly A; Vadopalas, Brent; Roberts, Steven B; Putnam, H M (2020): Repeat exposure to hypercapnic seawater modifies performance and oxidative status in a tolerant burrowing clam [dataset]. Zenodo, https://doi.org/10.5281/zenodo.3903019
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.941416
https://doi.org/10.1594/PANGAEA.941416
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.94141610.1242/jeb.23393210.5281/zenodo.3903019
_version_ 1810469423746646016