Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)

Ocean acidification (OA) threatens the growth and function of coral reef ecosystems. A key component to coral health is the microbiome, but little is known about the impact of OA on coral microbiomes. A submarine CO2 vent at Maug Island in the Northern Marianas Islands provides a natural pH gradient...

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Bibliographic Details
Main Authors: Shore, A, Day, R D, Stewart, J A, Burge, Colleen A
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
EXP
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.930632
https://doi.org/10.1594/PANGAEA.930632
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930632
record_format openpolar
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Acid-base regulation
Alkalinity
total
Aluminium/Calcium ratio
Animalia
Antimony/Calcium ratio
Aragonite saturation state
Argentum/Calcium ratio
Barium/Calcium ratio
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Cadmium/Calcium ratio
Caesium/Calcium ratio
Calcite saturation state
Calcium
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Chromium/Calcium ratio
Cnidaria
CO2 vent
Coast and continental shelf
Cobalt/Calcium ratio
Community composition and diversity
Copper/Calcium ratio
Entire community
EXP
Experiment
Field observation
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Iron/Calcium ratio
Lead/Calcium ratio
Lithium/Calcium ratio
Lithium/Magnesium ratio
Magnesium/Calcium ratio
Manganese/Calcium ratio
Molybdenum/Calcium ratio
Neodymium/Calcium ratio
Nickel/Calcium ratio
Northern_Mariana_Islands
North Pacific
Number of sequences
spellingShingle Acid-base regulation
Alkalinity
total
Aluminium/Calcium ratio
Animalia
Antimony/Calcium ratio
Aragonite saturation state
Argentum/Calcium ratio
Barium/Calcium ratio
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Cadmium/Calcium ratio
Caesium/Calcium ratio
Calcite saturation state
Calcium
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Chromium/Calcium ratio
Cnidaria
CO2 vent
Coast and continental shelf
Cobalt/Calcium ratio
Community composition and diversity
Copper/Calcium ratio
Entire community
EXP
Experiment
Field observation
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Iron/Calcium ratio
Lead/Calcium ratio
Lithium/Calcium ratio
Lithium/Magnesium ratio
Magnesium/Calcium ratio
Manganese/Calcium ratio
Molybdenum/Calcium ratio
Neodymium/Calcium ratio
Nickel/Calcium ratio
Northern_Mariana_Islands
North Pacific
Number of sequences
Shore, A
Day, R D
Stewart, J A
Burge, Colleen A
Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
topic_facet Acid-base regulation
Alkalinity
total
Aluminium/Calcium ratio
Animalia
Antimony/Calcium ratio
Aragonite saturation state
Argentum/Calcium ratio
Barium/Calcium ratio
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Cadmium/Calcium ratio
Caesium/Calcium ratio
Calcite saturation state
Calcium
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Chromium/Calcium ratio
Cnidaria
CO2 vent
Coast and continental shelf
Cobalt/Calcium ratio
Community composition and diversity
Copper/Calcium ratio
Entire community
EXP
Experiment
Field observation
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Iron/Calcium ratio
Lead/Calcium ratio
Lithium/Calcium ratio
Lithium/Magnesium ratio
Magnesium/Calcium ratio
Manganese/Calcium ratio
Molybdenum/Calcium ratio
Neodymium/Calcium ratio
Nickel/Calcium ratio
Northern_Mariana_Islands
North Pacific
Number of sequences
description Ocean acidification (OA) threatens the growth and function of coral reef ecosystems. A key component to coral health is the microbiome, but little is known about the impact of OA on coral microbiomes. A submarine CO2 vent at Maug Island in the Northern Marianas Islands provides a natural pH gradient to investigate coral responses to long-term OA conditions. Three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus) were sampled from three sites where mean seawater pH is 8.04, 7.98, and 7.94. We characterized coral bacterial communities (using 16S rRNA gene sequencing) and determined pH of the extracellular calcifying fluid (ECF) (using skeletal boron isotopes) across the seawater pH gradient. Bacterial communities of both Porites species stabilized (decreases in community dispersion) with decreased seawater pH, coupled with large increases in the abundance of Endozoicomonas, an endosymbiont. P. lobata experienced a significant decrease in ECF pH near the vent, whereas P. rus experienced a trending decrease in ECF pH near the vent. By contrast, Pocillopora exhibited bacterial community destabilization (increases in community dispersion), with significant decreases in Endozoicomonas abundance, while its ECF pH remained unchanged across the pH gradient. Our study shows that OA has multiple consequences on Endozoicomonas abundance and suggests that Endozoicomonas abundance may be an indicator of coral response to OA. We reveal an interesting dichotomy between two facets of coral physiology (regulation of bacterial communities and regulation of calcification), highlighting the importance of multidisciplinary approaches to understanding coral health and function in a changing ocean.
format Dataset
author Shore, A
Day, R D
Stewart, J A
Burge, Colleen A
author_facet Shore, A
Day, R D
Stewart, J A
Burge, Colleen A
author_sort Shore, A
title Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
title_short Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
title_full Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
title_fullStr Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
title_full_unstemmed Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus)
title_sort seawater carbonate chemistry and ph of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (pocillopora eydouxi, porites lobata, and porites rus)
publisher PANGAEA
publishDate 2021
url https://doi.pangaea.de/10.1594/PANGAEA.930632
https://doi.org/10.1594/PANGAEA.930632
op_coverage LATITUDE: 20.016600 * LONGITUDE: 145.216600
long_lat ENVELOPE(155.950,155.950,54.200,54.200)
ENVELOPE(145.216600,145.216600,20.016600,20.016600)
geographic Pacific
Rus’
geographic_facet Pacific
Rus’
genre Ocean acidification
genre_facet Ocean acidification
op_relation Shore, A; Day, R D; Stewart, J A; Burge, Colleen A (2021): Dichotomy between Regulation of Coral Bacterial Communities and Calcification Physiology under Ocean Acidification Conditions. Applied and Environmental Microbiology, 87(6), https://doi.org/10.1128/AEM.02189-20
Enochs, I C; Manzello, Derek P; Donham, E M; Kolodziej, Graham; Okano, R; Johnston, Lyza; Young, Craig S; Iguel, John; Edwards, C B; Fox, M D; Valentino, L; Johnson, Steven; Benavente, D; Clark, S J; Carlton, R; Burton, T; Eynaud, Y; Price, Nichole N (2015): Shift from coral to macroalgae dominance on a volcanically acidified reef. PANGAEA, https://doi.org/10.1594/PANGAEA.867324
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.930632
https://doi.org/10.1594/PANGAEA.930632
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.930632
https://doi.org/10.1128/AEM.02189-20
https://doi.org/10.1594/PANGAEA.867324
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spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930632 2023-05-15T17:52:13+02:00 Seawater carbonate chemistry and pH of the extracellular calcifying fluid and skeletal concentrations of trace metals of three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus) Shore, A Day, R D Stewart, J A Burge, Colleen A LATITUDE: 20.016600 * LONGITUDE: 145.216600 2021-04-22 text/tab-separated-values, 2779 data points https://doi.pangaea.de/10.1594/PANGAEA.930632 https://doi.org/10.1594/PANGAEA.930632 en eng PANGAEA Shore, A; Day, R D; Stewart, J A; Burge, Colleen A (2021): Dichotomy between Regulation of Coral Bacterial Communities and Calcification Physiology under Ocean Acidification Conditions. Applied and Environmental Microbiology, 87(6), https://doi.org/10.1128/AEM.02189-20 Enochs, I C; Manzello, Derek P; Donham, E M; Kolodziej, Graham; Okano, R; Johnston, Lyza; Young, Craig S; Iguel, John; Edwards, C B; Fox, M D; Valentino, L; Johnson, Steven; Benavente, D; Clark, S J; Carlton, R; Burton, T; Eynaud, Y; Price, Nichole N (2015): Shift from coral to macroalgae dominance on a volcanically acidified reef. PANGAEA, https://doi.org/10.1594/PANGAEA.867324 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.930632 https://doi.org/10.1594/PANGAEA.930632 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Acid-base regulation Alkalinity total Aluminium/Calcium ratio Animalia Antimony/Calcium ratio Aragonite saturation state Argentum/Calcium ratio Barium/Calcium ratio Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Cadmium/Calcium ratio Caesium/Calcium ratio Calcite saturation state Calcium Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chromium/Calcium ratio Cnidaria CO2 vent Coast and continental shelf Cobalt/Calcium ratio Community composition and diversity Copper/Calcium ratio Entire community EXP Experiment Field observation Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Iron/Calcium ratio Lead/Calcium ratio Lithium/Calcium ratio Lithium/Magnesium ratio Magnesium/Calcium ratio Manganese/Calcium ratio Molybdenum/Calcium ratio Neodymium/Calcium ratio Nickel/Calcium ratio Northern_Mariana_Islands North Pacific Number of sequences Dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.930632 https://doi.org/10.1128/AEM.02189-20 https://doi.org/10.1594/PANGAEA.867324 2023-01-20T09:14:49Z Ocean acidification (OA) threatens the growth and function of coral reef ecosystems. A key component to coral health is the microbiome, but little is known about the impact of OA on coral microbiomes. A submarine CO2 vent at Maug Island in the Northern Marianas Islands provides a natural pH gradient to investigate coral responses to long-term OA conditions. Three coral species (Pocillopora eydouxi, Porites lobata, and Porites rus) were sampled from three sites where mean seawater pH is 8.04, 7.98, and 7.94. We characterized coral bacterial communities (using 16S rRNA gene sequencing) and determined pH of the extracellular calcifying fluid (ECF) (using skeletal boron isotopes) across the seawater pH gradient. Bacterial communities of both Porites species stabilized (decreases in community dispersion) with decreased seawater pH, coupled with large increases in the abundance of Endozoicomonas, an endosymbiont. P. lobata experienced a significant decrease in ECF pH near the vent, whereas P. rus experienced a trending decrease in ECF pH near the vent. By contrast, Pocillopora exhibited bacterial community destabilization (increases in community dispersion), with significant decreases in Endozoicomonas abundance, while its ECF pH remained unchanged across the pH gradient. Our study shows that OA has multiple consequences on Endozoicomonas abundance and suggests that Endozoicomonas abundance may be an indicator of coral response to OA. We reveal an interesting dichotomy between two facets of coral physiology (regulation of bacterial communities and regulation of calcification), highlighting the importance of multidisciplinary approaches to understanding coral health and function in a changing ocean. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific Rus’ ENVELOPE(155.950,155.950,54.200,54.200) ENVELOPE(145.216600,145.216600,20.016600,20.016600)