Benthic community structure in surface sediments from Isfjorden, Svalbard

Bibliographic Details
Main Authors: Knittel, Katrin, Miksch, Sebastian, Wegener, Gunter, Meiners, Mirja
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
Accession number
genetics
Actinomarinales
cell abundance
targeted by oligonucleotide FISH probe ACM1218
Arctic
Bacteria
targeted by oligonucleotide FISH probe EUB338-I-III
bacterial community composition
Bacteroidota
targeted by oligonucleotide FISH probe CF319a
Calculated from DADA2 analysis
Carbon
organic
total
CARD-FISH
Catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
Chlorophyll a
Cyclops-7
submersible sensor
Turner Designs
San Jose
USA
DATE/TIME
Depth
bottom/max
sediment/rock
top/min
water
Desulfobacterota
targeted by oligonucleotide FISH probe DELTA495a-c
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance
targeted by oligonucleotide FISH probe DSS658
ELEVATION
Epifluorescence microscopy after DAPI staining
Event label
Gammaproteobacteria
targeted by oligonucleotide FISH probe GAM42a
Inverse Simpson index of diversity
ISF_05
ISF_06
Isfjord*
Isfjorden
Svalbard
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.930472
https://doi.org/10.1594/PANGAEA.930472
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930472
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930472 2024-09-15T18:15:15+00:00 Benthic community structure in surface sediments from Isfjorden, Svalbard Knittel, Katrin Miksch, Sebastian Wegener, Gunter Meiners, Mirja MEDIAN LATITUDE: 78.104325 * MEDIAN LONGITUDE: 14.375950 * SOUTH-BOUND LATITUDE: 78.102800 * WEST-BOUND LONGITUDE: 14.349600 * NORTH-BOUND LATITUDE: 78.106600 * EAST-BOUND LONGITUDE: 14.394200 * DATE/TIME START: 2017-12-20T00:00:00 * DATE/TIME END: 2019-09-13T00:00:00 2021 text/tab-separated-values, 547 data points https://doi.pangaea.de/10.1594/PANGAEA.930472 https://doi.org/10.1594/PANGAEA.930472 en eng PANGAEA https://doi.org/10.1594/PANGAEA.930483 Miksch, Sebastian; Meiners, Mirja; Meyerdierks, Anke; Probandt, David; Wegener, Gunter; Titschack, Jürgen; Jensen, Maria A; Ellrott, Andreas; Amann, Rudolf; Knittel, Katrin (2021): Bacterial communities in temperate and polar coastal sands are seasonally stable. ISME Communications, 1(1), https://doi.org/10.1038/s43705-021-00028-w https://doi.pangaea.de/10.1594/PANGAEA.930472 https://doi.org/10.1594/PANGAEA.930472 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Accession number genetics Actinomarinales cell abundance targeted by oligonucleotide FISH probe ACM1218 Arctic Bacteria targeted by oligonucleotide FISH probe EUB338-I-III bacterial community composition Bacteroidota targeted by oligonucleotide FISH probe CF319a Calculated from DADA2 analysis Carbon organic total CARD-FISH Catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) Chlorophyll a Cyclops-7 submersible sensor Turner Designs San Jose USA DATE/TIME Depth bottom/max sediment/rock top/min water Desulfobacterota targeted by oligonucleotide FISH probe DELTA495a-c Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance targeted by oligonucleotide FISH probe DSS658 ELEVATION Epifluorescence microscopy after DAPI staining Event label Gammaproteobacteria targeted by oligonucleotide FISH probe GAM42a Inverse Simpson index of diversity ISF_05 ISF_06 dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.93047210.1594/PANGAEA.93048310.1038/s43705-021-00028-w 2024-07-24T02:31:42Z Dataset Isfjord* Isfjorden Svalbard PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(14.349600,14.394200,78.106600,78.102800)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Accession number
genetics
Actinomarinales
cell abundance
targeted by oligonucleotide FISH probe ACM1218
Arctic
Bacteria
targeted by oligonucleotide FISH probe EUB338-I-III
bacterial community composition
Bacteroidota
targeted by oligonucleotide FISH probe CF319a
Calculated from DADA2 analysis
Carbon
organic
total
CARD-FISH
Catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
Chlorophyll a
Cyclops-7
submersible sensor
Turner Designs
San Jose
USA
DATE/TIME
Depth
bottom/max
sediment/rock
top/min
water
Desulfobacterota
targeted by oligonucleotide FISH probe DELTA495a-c
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance
targeted by oligonucleotide FISH probe DSS658
ELEVATION
Epifluorescence microscopy after DAPI staining
Event label
Gammaproteobacteria
targeted by oligonucleotide FISH probe GAM42a
Inverse Simpson index of diversity
ISF_05
ISF_06
spellingShingle Accession number
genetics
Actinomarinales
cell abundance
targeted by oligonucleotide FISH probe ACM1218
Arctic
Bacteria
targeted by oligonucleotide FISH probe EUB338-I-III
bacterial community composition
Bacteroidota
targeted by oligonucleotide FISH probe CF319a
Calculated from DADA2 analysis
Carbon
organic
total
CARD-FISH
Catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
Chlorophyll a
Cyclops-7
submersible sensor
Turner Designs
San Jose
USA
DATE/TIME
Depth
bottom/max
sediment/rock
top/min
water
Desulfobacterota
targeted by oligonucleotide FISH probe DELTA495a-c
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance
targeted by oligonucleotide FISH probe DSS658
ELEVATION
Epifluorescence microscopy after DAPI staining
Event label
Gammaproteobacteria
targeted by oligonucleotide FISH probe GAM42a
Inverse Simpson index of diversity
ISF_05
ISF_06
Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
Benthic community structure in surface sediments from Isfjorden, Svalbard
topic_facet Accession number
genetics
Actinomarinales
cell abundance
targeted by oligonucleotide FISH probe ACM1218
Arctic
Bacteria
targeted by oligonucleotide FISH probe EUB338-I-III
bacterial community composition
Bacteroidota
targeted by oligonucleotide FISH probe CF319a
Calculated from DADA2 analysis
Carbon
organic
total
CARD-FISH
Catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
Chlorophyll a
Cyclops-7
submersible sensor
Turner Designs
San Jose
USA
DATE/TIME
Depth
bottom/max
sediment/rock
top/min
water
Desulfobacterota
targeted by oligonucleotide FISH probe DELTA495a-c
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance
targeted by oligonucleotide FISH probe DSS658
ELEVATION
Epifluorescence microscopy after DAPI staining
Event label
Gammaproteobacteria
targeted by oligonucleotide FISH probe GAM42a
Inverse Simpson index of diversity
ISF_05
ISF_06
format Dataset
author Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
author_facet Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
author_sort Knittel, Katrin
title Benthic community structure in surface sediments from Isfjorden, Svalbard
title_short Benthic community structure in surface sediments from Isfjorden, Svalbard
title_full Benthic community structure in surface sediments from Isfjorden, Svalbard
title_fullStr Benthic community structure in surface sediments from Isfjorden, Svalbard
title_full_unstemmed Benthic community structure in surface sediments from Isfjorden, Svalbard
title_sort benthic community structure in surface sediments from isfjorden, svalbard
publisher PANGAEA
publishDate 2021
url https://doi.pangaea.de/10.1594/PANGAEA.930472
https://doi.org/10.1594/PANGAEA.930472
op_coverage MEDIAN LATITUDE: 78.104325 * MEDIAN LONGITUDE: 14.375950 * SOUTH-BOUND LATITUDE: 78.102800 * WEST-BOUND LONGITUDE: 14.349600 * NORTH-BOUND LATITUDE: 78.106600 * EAST-BOUND LONGITUDE: 14.394200 * DATE/TIME START: 2017-12-20T00:00:00 * DATE/TIME END: 2019-09-13T00:00:00
long_lat ENVELOPE(14.349600,14.394200,78.106600,78.102800)
genre Isfjord*
Isfjorden
Svalbard
genre_facet Isfjord*
Isfjorden
Svalbard
op_relation https://doi.org/10.1594/PANGAEA.930483
Miksch, Sebastian; Meiners, Mirja; Meyerdierks, Anke; Probandt, David; Wegener, Gunter; Titschack, Jürgen; Jensen, Maria A; Ellrott, Andreas; Amann, Rudolf; Knittel, Katrin (2021): Bacterial communities in temperate and polar coastal sands are seasonally stable. ISME Communications, 1(1), https://doi.org/10.1038/s43705-021-00028-w
https://doi.pangaea.de/10.1594/PANGAEA.930472
https://doi.org/10.1594/PANGAEA.930472
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.93047210.1594/PANGAEA.93048310.1038/s43705-021-00028-w
_version_ 1810453007820652544

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