Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)

Ocean acidification is a consequence of chemical changes driven mainly by a continuous uptake of carbon dioxide, resulting in pH decrease. This phenomenon represents an additional threat to marine life, with expected effects ranging from changes in behavioral responses and calcification rates to the...

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Main Authors: Pegado, Maria, Santos, Catarina P, Pimentel, Marta, Cyrne, Ricardo, Sampaio, Eduardo, Temporão, Ana, Röckner, Janina, Diniz, Mário, Rosa, Rui
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.929859
https://doi.org/10.1594/PANGAEA.929859
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.929859
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.929859 2024-09-15T18:24:27+00:00 Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula) Pegado, Maria Santos, Catarina P Pimentel, Marta Cyrne, Ricardo Sampaio, Eduardo Temporão, Ana Röckner, Janina Diniz, Mário Rosa, Rui 2020 text/tab-separated-values, 29525 data points https://doi.pangaea.de/10.1594/PANGAEA.929859 https://doi.org/10.1594/PANGAEA.929859 en eng PANGAEA Pegado, Maria; Santos, Catarina P; Pimentel, Marta; Cyrne, Ricardo; Sampaio, Eduardo; Temporão, Ana; Röckner, Janina; Diniz, Mário; Rosa, Rui (2020): Lack of oxidative damage on temperate juvenile catsharks after a long-term ocean acidification exposure. Marine Biology, 167(11), https://doi.org/10.1007/s00227-020-03770-2 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.929859 https://doi.org/10.1594/PANGAEA.929859 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Animalia Aragonite saturation state Benthos Bicarbonate ion Calcite saturation state Calculated Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) DNA damage per protein Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Heat shock protein Identification Laboratory experiment Lipid peroxidation per wet mass Nekton North Atlantic OA-ICC Ocean Acidification International Coordination Centre Organ Other metabolic rates Other studied parameter or process Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.92985910.1007/s00227-020-03770-2 2024-07-24T02:31:34Z Ocean acidification is a consequence of chemical changes driven mainly by a continuous uptake of carbon dioxide, resulting in pH decrease. This phenomenon represents an additional threat to marine life, with expected effects ranging from changes in behavioral responses and calcification rates to the potential promotion of oxidative stress. To unravel the impacts of ocean acidification on the antioxidant system of sharks, we performed a long-term exposure (9 months, since early embryogenesis) to high CO2 conditions (pCO2 900 μatm) on a temperate shark (Scyliorhinus canicula). The following biomarkers were measured: enzymatic antioxidant defense (superoxide dismutase, catalase and glutathione peroxidase), protein repair and removal (heat shock proteins and ubiquitin), and oxidative damage on lipids (malondialdehyde) and DNA (8-hydroxy-2′-deoxyguanosine). Changes in the antioxidant enzyme defense were restricted to an increase in catalase activity in the muscle, an enzyme that plays a major role in oxidative stress mitigation. On the other hand, no evidence of oxidative damage was found, indicating that the observed increase in catalase activity may be enough to neutralize the effects of potentially higher reactive oxygen species. These results further indicate that these sharks' antioxidant system can successfully cope with the levels of carbon dioxide projected for the end of the century. Nonetheless, the interaction between ocean acidification and the rise in temperature expected to occur in a near future may disturb their antioxidant capacity, requiring further investigation. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chordata
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
DNA damage
per protein
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Heat shock protein
Identification
Laboratory experiment
Lipid peroxidation
per wet mass
Nekton
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Organ
Other metabolic rates
Other studied parameter or process
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
spellingShingle Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chordata
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
DNA damage
per protein
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Heat shock protein
Identification
Laboratory experiment
Lipid peroxidation
per wet mass
Nekton
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Organ
Other metabolic rates
Other studied parameter or process
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Pegado, Maria
Santos, Catarina P
Pimentel, Marta
Cyrne, Ricardo
Sampaio, Eduardo
Temporão, Ana
Röckner, Janina
Diniz, Mário
Rosa, Rui
Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
topic_facet Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chordata
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
DNA damage
per protein
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Heat shock protein
Identification
Laboratory experiment
Lipid peroxidation
per wet mass
Nekton
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Organ
Other metabolic rates
Other studied parameter or process
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
description Ocean acidification is a consequence of chemical changes driven mainly by a continuous uptake of carbon dioxide, resulting in pH decrease. This phenomenon represents an additional threat to marine life, with expected effects ranging from changes in behavioral responses and calcification rates to the potential promotion of oxidative stress. To unravel the impacts of ocean acidification on the antioxidant system of sharks, we performed a long-term exposure (9 months, since early embryogenesis) to high CO2 conditions (pCO2 900 μatm) on a temperate shark (Scyliorhinus canicula). The following biomarkers were measured: enzymatic antioxidant defense (superoxide dismutase, catalase and glutathione peroxidase), protein repair and removal (heat shock proteins and ubiquitin), and oxidative damage on lipids (malondialdehyde) and DNA (8-hydroxy-2′-deoxyguanosine). Changes in the antioxidant enzyme defense were restricted to an increase in catalase activity in the muscle, an enzyme that plays a major role in oxidative stress mitigation. On the other hand, no evidence of oxidative damage was found, indicating that the observed increase in catalase activity may be enough to neutralize the effects of potentially higher reactive oxygen species. These results further indicate that these sharks' antioxidant system can successfully cope with the levels of carbon dioxide projected for the end of the century. Nonetheless, the interaction between ocean acidification and the rise in temperature expected to occur in a near future may disturb their antioxidant capacity, requiring further investigation.
format Dataset
author Pegado, Maria
Santos, Catarina P
Pimentel, Marta
Cyrne, Ricardo
Sampaio, Eduardo
Temporão, Ana
Röckner, Janina
Diniz, Mário
Rosa, Rui
author_facet Pegado, Maria
Santos, Catarina P
Pimentel, Marta
Cyrne, Ricardo
Sampaio, Eduardo
Temporão, Ana
Röckner, Janina
Diniz, Mário
Rosa, Rui
author_sort Pegado, Maria
title Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
title_short Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
title_full Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
title_fullStr Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
title_full_unstemmed Seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (Scyliorhinus canicula)
title_sort seawater carbonate chemistry and enzymatic antioxidant defense, protein repair and removal of temperate shark (scyliorhinus canicula)
publisher PANGAEA
publishDate 2020
url https://doi.pangaea.de/10.1594/PANGAEA.929859
https://doi.org/10.1594/PANGAEA.929859
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation Pegado, Maria; Santos, Catarina P; Pimentel, Marta; Cyrne, Ricardo; Sampaio, Eduardo; Temporão, Ana; Röckner, Janina; Diniz, Mário; Rosa, Rui (2020): Lack of oxidative damage on temperate juvenile catsharks after a long-term ocean acidification exposure. Marine Biology, 167(11), https://doi.org/10.1007/s00227-020-03770-2
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.929859
https://doi.org/10.1594/PANGAEA.929859
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.92985910.1007/s00227-020-03770-2
_version_ 1810464797949427712