Seawater carbonate chemistry and respiration, primary production and composition of microbial community
Ambient conditions shape microbiome responses to both short- and long-duration environment changes through processes including physiological acclimation, compositional shifts, and evolution. Thus, we predict that microbial communities inhabiting locations with larger diel, episodic, and annual varia...
Main Authors: | , , , , , , , , , |
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Format: | Dataset |
Language: | English |
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PANGAEA
2021
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.923999 https://doi.org/10.1594/PANGAEA.923999 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923999 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Alkalinity total Aragonite saturation state Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell density Chlorophyll a Coast and continental shelf Comment Community composition and diversity Day of experiment Entire community Event label EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Newport_River_estuary_nearshore Newport_River_estuary_offshore North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Primary production/Photosynthesis Primary production of carbon per hour Replicate Respiration Respiration rate oxygen Salinity Temperate Temperature water Treatment Type |
spellingShingle |
Alkalinity total Aragonite saturation state Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell density Chlorophyll a Coast and continental shelf Comment Community composition and diversity Day of experiment Entire community Event label EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Newport_River_estuary_nearshore Newport_River_estuary_offshore North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Primary production/Photosynthesis Primary production of carbon per hour Replicate Respiration Respiration rate oxygen Salinity Temperate Temperature water Treatment Type Wang, Z Tsementzi, Despina Williams, Tiffany C Juarez, Doris L Blinebry, Sara K Garcia, Nathan S Sienkiewicz, Brooke K Konstantinidis, Konstantinos T Johnson, Zackary I Hunt, Dana E Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
topic_facet |
Alkalinity total Aragonite saturation state Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell density Chlorophyll a Coast and continental shelf Comment Community composition and diversity Day of experiment Entire community Event label EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Newport_River_estuary_nearshore Newport_River_estuary_offshore North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Primary production/Photosynthesis Primary production of carbon per hour Replicate Respiration Respiration rate oxygen Salinity Temperate Temperature water Treatment Type |
description |
Ambient conditions shape microbiome responses to both short- and long-duration environment changes through processes including physiological acclimation, compositional shifts, and evolution. Thus, we predict that microbial communities inhabiting locations with larger diel, episodic, and annual variability in temperature and pH should be less sensitive to shifts in these climate-change factors. To test this hypothesis, we compared responses of surface ocean microbes from more variable (nearshore) and more constant (offshore) sites to short-term factorial warming (+3 °C) and/or acidification (pH -0.3). In all cases, warming alone significantly altered microbial community composition, while acidification had a minor influence. Compared with nearshore microbes, warmed offshore microbiomes exhibited larger changes in community composition, phylotype abundances, respiration rates, and metatranscriptomes, suggesting increased sensitivity of microbes from the less-variable environment. Moreover, while warming increased respiration rates, offshore metatranscriptomes yielded evidence of thermal stress responses in protein synthesis, heat shock proteins, and regulation. Future oceans with warmer waters may enhance overall metabolic and biogeochemical rates, but they will host altered microbial communities, especially in relatively thermally stable regions of the oceans. |
format |
Dataset |
author |
Wang, Z Tsementzi, Despina Williams, Tiffany C Juarez, Doris L Blinebry, Sara K Garcia, Nathan S Sienkiewicz, Brooke K Konstantinidis, Konstantinos T Johnson, Zackary I Hunt, Dana E |
author_facet |
Wang, Z Tsementzi, Despina Williams, Tiffany C Juarez, Doris L Blinebry, Sara K Garcia, Nathan S Sienkiewicz, Brooke K Konstantinidis, Konstantinos T Johnson, Zackary I Hunt, Dana E |
author_sort |
Wang, Z |
title |
Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
title_short |
Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
title_full |
Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
title_fullStr |
Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
title_full_unstemmed |
Seawater carbonate chemistry and respiration, primary production and composition of microbial community |
title_sort |
seawater carbonate chemistry and respiration, primary production and composition of microbial community |
publisher |
PANGAEA |
publishDate |
2021 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.923999 https://doi.org/10.1594/PANGAEA.923999 |
op_coverage |
MEDIAN LATITUDE: 34.376500 * MEDIAN LONGITUDE: -76.434100 * SOUTH-BOUND LATITUDE: 34.034900 * WEST-BOUND LONGITUDE: -76.670700 * NORTH-BOUND LATITUDE: 34.718100 * EAST-BOUND LONGITUDE: -76.197500 |
long_lat |
ENVELOPE(-76.670700,-76.197500,34.718100,34.034900) |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
Wang, Z; Tsementzi, Despina; Williams, Tiffany C; Juarez, Doris L; Blinebry, Sara K; Garcia, Nathan S; Sienkiewicz, Brooke K; Konstantinidis, Konstantinos T; Johnson, Zackary I; Hunt, Dana E (2020): Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity. The ISME Journal, https://doi.org/10.1038/s41396-020-00748-2 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.923999 https://doi.org/10.1594/PANGAEA.923999 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.92399910.1038/s41396-020-00748-2 |
_version_ |
1810464631912660992 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923999 2024-09-15T18:24:18+00:00 Seawater carbonate chemistry and respiration, primary production and composition of microbial community Wang, Z Tsementzi, Despina Williams, Tiffany C Juarez, Doris L Blinebry, Sara K Garcia, Nathan S Sienkiewicz, Brooke K Konstantinidis, Konstantinos T Johnson, Zackary I Hunt, Dana E MEDIAN LATITUDE: 34.376500 * MEDIAN LONGITUDE: -76.434100 * SOUTH-BOUND LATITUDE: 34.034900 * WEST-BOUND LONGITUDE: -76.670700 * NORTH-BOUND LATITUDE: 34.718100 * EAST-BOUND LONGITUDE: -76.197500 2021 text/tab-separated-values, 12208 data points https://doi.pangaea.de/10.1594/PANGAEA.923999 https://doi.org/10.1594/PANGAEA.923999 en eng PANGAEA Wang, Z; Tsementzi, Despina; Williams, Tiffany C; Juarez, Doris L; Blinebry, Sara K; Garcia, Nathan S; Sienkiewicz, Brooke K; Konstantinidis, Konstantinos T; Johnson, Zackary I; Hunt, Dana E (2020): Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity. The ISME Journal, https://doi.org/10.1038/s41396-020-00748-2 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.923999 https://doi.org/10.1594/PANGAEA.923999 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total Aragonite saturation state Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell density Chlorophyll a Coast and continental shelf Comment Community composition and diversity Day of experiment Entire community Event label EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Newport_River_estuary_nearshore Newport_River_estuary_offshore North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Primary production/Photosynthesis Primary production of carbon per hour Replicate Respiration Respiration rate oxygen Salinity Temperate Temperature water Treatment Type dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.92399910.1038/s41396-020-00748-2 2024-07-24T02:31:34Z Ambient conditions shape microbiome responses to both short- and long-duration environment changes through processes including physiological acclimation, compositional shifts, and evolution. Thus, we predict that microbial communities inhabiting locations with larger diel, episodic, and annual variability in temperature and pH should be less sensitive to shifts in these climate-change factors. To test this hypothesis, we compared responses of surface ocean microbes from more variable (nearshore) and more constant (offshore) sites to short-term factorial warming (+3 °C) and/or acidification (pH -0.3). In all cases, warming alone significantly altered microbial community composition, while acidification had a minor influence. Compared with nearshore microbes, warmed offshore microbiomes exhibited larger changes in community composition, phylotype abundances, respiration rates, and metatranscriptomes, suggesting increased sensitivity of microbes from the less-variable environment. Moreover, while warming increased respiration rates, offshore metatranscriptomes yielded evidence of thermal stress responses in protein synthesis, heat shock proteins, and regulation. Future oceans with warmer waters may enhance overall metabolic and biogeochemical rates, but they will host altered microbial communities, especially in relatively thermally stable regions of the oceans. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-76.670700,-76.197500,34.718100,34.034900) |