Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments

Environmental DNA (eDNA) metabarcoding of marine sediments has revealed large amounts of sequences assigned to planktonic taxa. How this planktonic eDNA is delivered on the seafloor and preserved in the sediment is not well understood. We address these questions by comparing metabarcoding and microf...

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Main Authors: Barrenechea Angeles, Ines, Lejzerowicz, Franck, Cordier, Tristan, Scheplitz, Janin, Kucera, Michal, Ariztegui, Daniel, Pawlowski, Jan, Morard, Raphael
Format: Other/Unknown Material
Language:English
Published: PANGAEA 2020
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.923417
https://doi.org/10.1594/PANGAEA.923417
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923417
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923417 2024-09-15T18:20:15+00:00 Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments Barrenechea Angeles, Ines Lejzerowicz, Franck Cordier, Tristan Scheplitz, Janin Kucera, Michal Ariztegui, Daniel Pawlowski, Jan Morard, Raphael MEDIAN LATITUDE: 46.614674 * MEDIAN LONGITUDE: -48.355504 * SOUTH-BOUND LATITUDE: 42.839500 * WEST-BOUND LONGITUDE: -54.653833 * NORTH-BOUND LATITUDE: 50.205667 * EAST-BOUND LONGITUDE: -44.167333 * DATE/TIME START: 2014-06-10T23:43:00 * DATE/TIME END: 2014-06-23T11:26:00 2020 application/zip, 3 datasets https://doi.pangaea.de/10.1594/PANGAEA.923417 https://doi.org/10.1594/PANGAEA.923417 en eng PANGAEA Barrenechea Angeles, Ines; Lejzerowicz, Franck; Cordier, Tristan; Scheplitz, Janin; Kucera, Michal; Ariztegui, Daniel; Pawlowski, Jan; Morard, Raphael (2020): Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments. Scientific Reports, 10(1), https://doi.org/10.1038/s41598-020-77179-8 https://doi.pangaea.de/10.1594/PANGAEA.923417 https://doi.org/10.1594/PANGAEA.923417 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Center for Marine Environmental Sciences Foraminifera MARUM metabarcoding microfossils North Atlantic sedimentary ancient DNA dataset publication series 2020 ftpangaea https://doi.org/10.1594/PANGAEA.92341710.1038/s41598-020-77179-8 2024-07-24T02:31:21Z Environmental DNA (eDNA) metabarcoding of marine sediments has revealed large amounts of sequences assigned to planktonic taxa. How this planktonic eDNA is delivered on the seafloor and preserved in the sediment is not well understood. We address these questions by comparing metabarcoding and microfossil foraminifera assemblages in sediment cores taken off Newfoundland across a strong ecological gradient. We detected planktonic foraminifera eDNA down to 30 cm and observed that the planktonic/benthic amplicon ratio changed with depth. The relative proportion of planktonic foraminiferal amplicons remained low from the surface down to 10 cm, likely due to the presence of DNA from living benthic foraminifera. Below 10 cm, the relative proportion of planktonic foraminifera amplicons rocketed, likely reflecting the higher proportion of planktonic eDNA in the DNA burial flux. In addition, the microfossil and metabarcoding assemblages showed a congruent pattern indicating that planktonic foraminifera eDNA is deposited without substantial lateral advection and preserves regional biogeographical patterns, indicating deposition by a similar mechanism as the foraminiferal shells. Our study shows that the planktonic eDNA preserved in marine sediments has the potential to record climatic and biotic changes in the pelagic community with the same spatial and temporal resolution as microfossils. Other/Unknown Material Newfoundland North Atlantic Planktonic foraminifera PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-54.653833,-44.167333,50.205667,42.839500)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Center for Marine Environmental Sciences
Foraminifera
MARUM
metabarcoding
microfossils
North Atlantic
sedimentary ancient DNA
spellingShingle Center for Marine Environmental Sciences
Foraminifera
MARUM
metabarcoding
microfossils
North Atlantic
sedimentary ancient DNA
Barrenechea Angeles, Ines
Lejzerowicz, Franck
Cordier, Tristan
Scheplitz, Janin
Kucera, Michal
Ariztegui, Daniel
Pawlowski, Jan
Morard, Raphael
Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
topic_facet Center for Marine Environmental Sciences
Foraminifera
MARUM
metabarcoding
microfossils
North Atlantic
sedimentary ancient DNA
description Environmental DNA (eDNA) metabarcoding of marine sediments has revealed large amounts of sequences assigned to planktonic taxa. How this planktonic eDNA is delivered on the seafloor and preserved in the sediment is not well understood. We address these questions by comparing metabarcoding and microfossil foraminifera assemblages in sediment cores taken off Newfoundland across a strong ecological gradient. We detected planktonic foraminifera eDNA down to 30 cm and observed that the planktonic/benthic amplicon ratio changed with depth. The relative proportion of planktonic foraminiferal amplicons remained low from the surface down to 10 cm, likely due to the presence of DNA from living benthic foraminifera. Below 10 cm, the relative proportion of planktonic foraminifera amplicons rocketed, likely reflecting the higher proportion of planktonic eDNA in the DNA burial flux. In addition, the microfossil and metabarcoding assemblages showed a congruent pattern indicating that planktonic foraminifera eDNA is deposited without substantial lateral advection and preserves regional biogeographical patterns, indicating deposition by a similar mechanism as the foraminiferal shells. Our study shows that the planktonic eDNA preserved in marine sediments has the potential to record climatic and biotic changes in the pelagic community with the same spatial and temporal resolution as microfossils.
format Other/Unknown Material
author Barrenechea Angeles, Ines
Lejzerowicz, Franck
Cordier, Tristan
Scheplitz, Janin
Kucera, Michal
Ariztegui, Daniel
Pawlowski, Jan
Morard, Raphael
author_facet Barrenechea Angeles, Ines
Lejzerowicz, Franck
Cordier, Tristan
Scheplitz, Janin
Kucera, Michal
Ariztegui, Daniel
Pawlowski, Jan
Morard, Raphael
author_sort Barrenechea Angeles, Ines
title Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
title_short Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
title_full Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
title_fullStr Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
title_full_unstemmed Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
title_sort planktonic foraminifera edna signature deposited on the seafloor remains preserved after burial in marine sediments
publisher PANGAEA
publishDate 2020
url https://doi.pangaea.de/10.1594/PANGAEA.923417
https://doi.org/10.1594/PANGAEA.923417
op_coverage MEDIAN LATITUDE: 46.614674 * MEDIAN LONGITUDE: -48.355504 * SOUTH-BOUND LATITUDE: 42.839500 * WEST-BOUND LONGITUDE: -54.653833 * NORTH-BOUND LATITUDE: 50.205667 * EAST-BOUND LONGITUDE: -44.167333 * DATE/TIME START: 2014-06-10T23:43:00 * DATE/TIME END: 2014-06-23T11:26:00
long_lat ENVELOPE(-54.653833,-44.167333,50.205667,42.839500)
genre Newfoundland
North Atlantic
Planktonic foraminifera
genre_facet Newfoundland
North Atlantic
Planktonic foraminifera
op_relation Barrenechea Angeles, Ines; Lejzerowicz, Franck; Cordier, Tristan; Scheplitz, Janin; Kucera, Michal; Ariztegui, Daniel; Pawlowski, Jan; Morard, Raphael (2020): Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments. Scientific Reports, 10(1), https://doi.org/10.1038/s41598-020-77179-8
https://doi.pangaea.de/10.1594/PANGAEA.923417
https://doi.org/10.1594/PANGAEA.923417
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.92341710.1038/s41598-020-77179-8
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