Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project
The Deep-sea Sponge Microbiome Project is a large-scale study, integrating 16S amplicon sequencing data of seawater, sediment, and sponges, with a large set of ecological and physical metadata. The present dataset includes NCBI-accession numbers, sample collection details, and diverse measurements,...
| Main Authors: | , |
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| Format: | Dataset |
| Language: | English |
| Published: |
PANGAEA
2022
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| Subjects: | |
| Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.923033 https://doi.org/10.1594/PANGAEA.923033 |
| id |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923033 |
|---|---|
| record_format |
openpolar |
| institution |
Open Polar |
| collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
| op_collection_id |
ftpangaea |
| language |
English |
| topic |
Accession number genetics Ada Rebikoff Agassiz Trawl AGT Alkalinity total Anchor dredge Angeles Alvarino ANT-XXXI/2 FROSN Arctic Ocean Area/locality ARK-XXVII/2 ARK-XXX/3 ARK-XXXI/2 Azores2018 Bay of Biscay BC BEAM Beam trawl Bleiksdjupet Bottle Niskin Bottom trawl Box corer BT Campaign Carbon inorganic particulate organic dissolved Carbon dioxide Celtic Voyager Class Conductivity CTD CTD/Rosette CTD1 CTD10 CTD11 CTD12 CTD13 CTD14 CTD15 |
| spellingShingle |
Accession number genetics Ada Rebikoff Agassiz Trawl AGT Alkalinity total Anchor dredge Angeles Alvarino ANT-XXXI/2 FROSN Arctic Ocean Area/locality ARK-XXVII/2 ARK-XXX/3 ARK-XXXI/2 Azores2018 Bay of Biscay BC BEAM Beam trawl Bleiksdjupet Bottle Niskin Bottom trawl Box corer BT Campaign Carbon inorganic particulate organic dissolved Carbon dioxide Celtic Voyager Class Conductivity CTD CTD/Rosette CTD1 CTD10 CTD11 CTD12 CTD13 CTD14 CTD15 Busch, Kathrin Hentschel, Ute Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| topic_facet |
Accession number genetics Ada Rebikoff Agassiz Trawl AGT Alkalinity total Anchor dredge Angeles Alvarino ANT-XXXI/2 FROSN Arctic Ocean Area/locality ARK-XXVII/2 ARK-XXX/3 ARK-XXXI/2 Azores2018 Bay of Biscay BC BEAM Beam trawl Bleiksdjupet Bottle Niskin Bottom trawl Box corer BT Campaign Carbon inorganic particulate organic dissolved Carbon dioxide Celtic Voyager Class Conductivity CTD CTD/Rosette CTD1 CTD10 CTD11 CTD12 CTD13 CTD14 CTD15 |
| description |
The Deep-sea Sponge Microbiome Project is a large-scale study, integrating 16S amplicon sequencing data of seawater, sediment, and sponges, with a large set of ecological and physical metadata. The present dataset includes NCBI-accession numbers, sample collection details, and diverse measurements, adding up to 50 entries for each of the 1546 covered samples. |
| format |
Dataset |
| author |
Busch, Kathrin Hentschel, Ute |
| author_facet |
Busch, Kathrin Hentschel, Ute |
| author_sort |
Busch, Kathrin |
| title |
Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| title_short |
Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| title_full |
Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| title_fullStr |
Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| title_full_unstemmed |
Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project |
| title_sort |
metadata and ncbi-accession numbers of the global deep-sea sponge microbiome project |
| publisher |
PANGAEA |
| publishDate |
2022 |
| url |
https://doi.pangaea.de/10.1594/PANGAEA.923033 https://doi.org/10.1594/PANGAEA.923033 |
| op_coverage |
MEDIAN LATITUDE: 42.626109 * MEDIAN LONGITUDE: 158.916347 * SOUTH-BOUND LATITUDE: -74.992700 * WEST-BOUND LONGITUDE: 4.181100 * NORTH-BOUND LATITUDE: 86.866000 * EAST-BOUND LONGITUDE: -4.092100 * DATE/TIME START: 2012-07-20T17:07:00 * DATE/TIME END: 2019-09-10T09:05:00 * MINIMUM DEPTH, water: 6 m * MAXIMUM DEPTH, water: 4833 m |
| long_lat |
ENVELOPE(4.181100,-4.092100,86.866000,-74.992700) |
| genre |
Arctic Ocean |
| genre_facet |
Arctic Ocean |
| op_relation |
Busch, Kathrin; Slaby, Beate M; Bach, Wolfgang; Boetius, Antje; Clefsen, Ina; Colaço, Ana; Creemers, Marie; Cristobo, Javier; Federwisch, Luisa; Franke, Andre; Gavriilidou, Asimenia; Hethke, Andrea; Kenchington, Ellen L; Mienis, Furu; Mills, Sadie; Riesgo, Ana; Rios, Pilar; Roberts, Emyr Martyn; Sipkema, Detmer; Pita, Lucía; Schupp, Peter; Xavier, Joana R; Rapp, Hans Tore; Hentschel, Ute (2022): Biodiversity, environmental drivers, and sustainability of the global deep-sea sponge microbiome. Nature Communications, 13(1), 5160, https://doi.org/10.1038/s41467-022-32684-4 Busch, Kathrin; Hentschel, Ute (2022): CTD profiles of the global Deep-sea Sponge Microbiome Project [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.923035 Garcia, H E; Weathers, Katharine W; Paver, Christopher R; Smolyar, I; Boyer, Timothy P; Locarnini, Ricardo A; Zweng, M M; Mishonov, Alexey V; Baranova, O; Seidov, Dan; Reagan, James R (2019): World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 83, 38pp., https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:NCEI-WOA18 Garcia, H E; Weathers, Katharine W; Paver, Christopher R; Smolyar, I; Boyer, Timothy P; Locarnini, Ricardo A; Zweng, M M; Mishonov, Alexey V; Baranova, O; Seidov, Dan; Reagan, James R (2019): World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 84, 35pp., https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:NCEI-WOA18 Locarnini, Ricardo A; Mishonov, Alexey V; Baranova, O; Boyer, Timothy P; Zweng, M M; Garcia, H E; Reagan, James R; Seidov, Dan; Weathers, Katharine W; Paver, Christopher R; Smolyar, I (2019): World Ocean Atlas 2018, Volume 1: Temperature. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 81, 52pp., https://www.ncei.noaa.gov/products/ocean-climate-laboratory NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Chlorophyll Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/CHL/2018 NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Particulate Inorganic Carbon Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/PIC/2018 NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Particulate Organic Carbon Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/POC/2018 Olsen, Are; Lange, Nico; Key, Robert M; Tanhua, Toste; Álvarez, Marta; Becker, Susan; Bittig, Henry; Carter, Brendan R; Cotrim da Cunha, Letícia; Feely, Richard A; van Heuven, Steven; Hoppema, Mario; Ishii, Masao; Jeansson, Emil; Jones, Steve D; Jutterstrøm, Sara; Karlsen, Maren K; Kozyr, Alexander; Lauvset, Siv K; Lo Monaco, Claire; Murata, Akihiko; Pérez, Fiz F; Pfeil, Benjamin; Schirnick, Carsten; Steinfeldt, Reiner; Suzuki, Toru; Telszewski, Maciej; Tilbrook, Bronte; Velo, Anton; Wanninkhof, Rik (2019): GLODAPv2.2019 – an update of GLODAPv2. Earth System Science Data, 11(3), 1437-1461, https://doi.org/10.5194/essd-11-1437-2019 Olsen, Are; Lange, Nico; Key, Robert M; Tanhua, Toste; Bittig, Henry C; Kozyr, Alexander; Álvarez, Marta; Azetsu-Scott, Kumiko; Becker, Susan; Brown, Peter J; Carter, Brendan R; Cotrim da Cunha, Letícia; Feely, Richard A; van Heuven, Steven; Hoppema, Mario; Ishii, Masao; Jeansson, Emil; Jutterstrøm, Sara; Landa, Camilla S; Lauvset, Siv K; Michaelis, Patrick; Murata, Akihiko; Pérez, Fiz F; Pfeil, Benjamin; Schirnick, Carsten; Steinfeldt, Reiner; Suzuki, Toru; Tilbrook, Bronte; Velo, Anton; Wanninkhof, Rik; Woosley, Ryan J (2020): An updated version of the global interior ocean biogeochemical data product, GLODAPv2.2020. Earth System Science Data, 12(4), 3653-3678, https://doi.org/10.5194/essd-12-3653-2020 Zweng, M M; Reagan, James R; Seidov, Dan; Boyer, Timothy P; Locarnini, Ricardo A; Garcia, H E; Mishonov, Alexey V; Baranova, O; Weathers, Katharine W; Paver, Christopher R; Smolyar, I (2019): World Ocean Atlas 2018, Volume 2: Salinity. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 82, 50pp., https://www.ncei.noaa.gov/access/world-ocean-atlas-2018/ https://doi.pangaea.de/10.1594/PANGAEA.923033 https://doi.org/10.1594/PANGAEA.923033 |
| op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
| op_doi |
https://doi.org/10.1594/PANGAEA.92303310.1038/s41467-022-32684-410.1594/PANGAEA.92303510.5067/AQUA/MODIS/L3M/CHL/201810.5067/AQUA/MODIS/L3M/PIC/201810.5067/AQUA/MODIS/L3M/POC/201810.5194/essd-11-1437-201910.5194/essd-12-3653-2020 |
| _version_ |
1810429851033665536 |
| spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.923033 2024-09-15T17:53:47+00:00 Metadata and NCBI-Accession numbers of the global Deep-sea Sponge Microbiome Project Busch, Kathrin Hentschel, Ute MEDIAN LATITUDE: 42.626109 * MEDIAN LONGITUDE: 158.916347 * SOUTH-BOUND LATITUDE: -74.992700 * WEST-BOUND LONGITUDE: 4.181100 * NORTH-BOUND LATITUDE: 86.866000 * EAST-BOUND LONGITUDE: -4.092100 * DATE/TIME START: 2012-07-20T17:07:00 * DATE/TIME END: 2019-09-10T09:05:00 * MINIMUM DEPTH, water: 6 m * MAXIMUM DEPTH, water: 4833 m 2022 text/tab-separated-values, 54242 data points https://doi.pangaea.de/10.1594/PANGAEA.923033 https://doi.org/10.1594/PANGAEA.923033 en eng PANGAEA Busch, Kathrin; Slaby, Beate M; Bach, Wolfgang; Boetius, Antje; Clefsen, Ina; Colaço, Ana; Creemers, Marie; Cristobo, Javier; Federwisch, Luisa; Franke, Andre; Gavriilidou, Asimenia; Hethke, Andrea; Kenchington, Ellen L; Mienis, Furu; Mills, Sadie; Riesgo, Ana; Rios, Pilar; Roberts, Emyr Martyn; Sipkema, Detmer; Pita, Lucía; Schupp, Peter; Xavier, Joana R; Rapp, Hans Tore; Hentschel, Ute (2022): Biodiversity, environmental drivers, and sustainability of the global deep-sea sponge microbiome. Nature Communications, 13(1), 5160, https://doi.org/10.1038/s41467-022-32684-4 Busch, Kathrin; Hentschel, Ute (2022): CTD profiles of the global Deep-sea Sponge Microbiome Project [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.923035 Garcia, H E; Weathers, Katharine W; Paver, Christopher R; Smolyar, I; Boyer, Timothy P; Locarnini, Ricardo A; Zweng, M M; Mishonov, Alexey V; Baranova, O; Seidov, Dan; Reagan, James R (2019): World Ocean Atlas 2018, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 83, 38pp., https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:NCEI-WOA18 Garcia, H E; Weathers, Katharine W; Paver, Christopher R; Smolyar, I; Boyer, Timothy P; Locarnini, Ricardo A; Zweng, M M; Mishonov, Alexey V; Baranova, O; Seidov, Dan; Reagan, James R (2019): World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate). In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 84, 35pp., https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:NCEI-WOA18 Locarnini, Ricardo A; Mishonov, Alexey V; Baranova, O; Boyer, Timothy P; Zweng, M M; Garcia, H E; Reagan, James R; Seidov, Dan; Weathers, Katharine W; Paver, Christopher R; Smolyar, I (2019): World Ocean Atlas 2018, Volume 1: Temperature. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 81, 52pp., https://www.ncei.noaa.gov/products/ocean-climate-laboratory NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Chlorophyll Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/CHL/2018 NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Particulate Inorganic Carbon Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/PIC/2018 NASA Ocean Biology Processing Group (2017): MODIS-Aqua Level 3 Mapped Particulate Organic Carbon Data Version R2018.0 [dataset]. NASA Ocean Biology DAAC, https://doi.org/10.5067/AQUA/MODIS/L3M/POC/2018 Olsen, Are; Lange, Nico; Key, Robert M; Tanhua, Toste; Álvarez, Marta; Becker, Susan; Bittig, Henry; Carter, Brendan R; Cotrim da Cunha, Letícia; Feely, Richard A; van Heuven, Steven; Hoppema, Mario; Ishii, Masao; Jeansson, Emil; Jones, Steve D; Jutterstrøm, Sara; Karlsen, Maren K; Kozyr, Alexander; Lauvset, Siv K; Lo Monaco, Claire; Murata, Akihiko; Pérez, Fiz F; Pfeil, Benjamin; Schirnick, Carsten; Steinfeldt, Reiner; Suzuki, Toru; Telszewski, Maciej; Tilbrook, Bronte; Velo, Anton; Wanninkhof, Rik (2019): GLODAPv2.2019 – an update of GLODAPv2. Earth System Science Data, 11(3), 1437-1461, https://doi.org/10.5194/essd-11-1437-2019 Olsen, Are; Lange, Nico; Key, Robert M; Tanhua, Toste; Bittig, Henry C; Kozyr, Alexander; Álvarez, Marta; Azetsu-Scott, Kumiko; Becker, Susan; Brown, Peter J; Carter, Brendan R; Cotrim da Cunha, Letícia; Feely, Richard A; van Heuven, Steven; Hoppema, Mario; Ishii, Masao; Jeansson, Emil; Jutterstrøm, Sara; Landa, Camilla S; Lauvset, Siv K; Michaelis, Patrick; Murata, Akihiko; Pérez, Fiz F; Pfeil, Benjamin; Schirnick, Carsten; Steinfeldt, Reiner; Suzuki, Toru; Tilbrook, Bronte; Velo, Anton; Wanninkhof, Rik; Woosley, Ryan J (2020): An updated version of the global interior ocean biogeochemical data product, GLODAPv2.2020. Earth System Science Data, 12(4), 3653-3678, https://doi.org/10.5194/essd-12-3653-2020 Zweng, M M; Reagan, James R; Seidov, Dan; Boyer, Timothy P; Locarnini, Ricardo A; Garcia, H E; Mishonov, Alexey V; Baranova, O; Weathers, Katharine W; Paver, Christopher R; Smolyar, I (2019): World Ocean Atlas 2018, Volume 2: Salinity. In: Mishonov, A. (Technical Ed.), NOAA Atlas NESDIS 82, 50pp., https://www.ncei.noaa.gov/access/world-ocean-atlas-2018/ https://doi.pangaea.de/10.1594/PANGAEA.923033 https://doi.org/10.1594/PANGAEA.923033 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Accession number genetics Ada Rebikoff Agassiz Trawl AGT Alkalinity total Anchor dredge Angeles Alvarino ANT-XXXI/2 FROSN Arctic Ocean Area/locality ARK-XXVII/2 ARK-XXX/3 ARK-XXXI/2 Azores2018 Bay of Biscay BC BEAM Beam trawl Bleiksdjupet Bottle Niskin Bottom trawl Box corer BT Campaign Carbon inorganic particulate organic dissolved Carbon dioxide Celtic Voyager Class Conductivity CTD CTD/Rosette CTD1 CTD10 CTD11 CTD12 CTD13 CTD14 CTD15 dataset 2022 ftpangaea https://doi.org/10.1594/PANGAEA.92303310.1038/s41467-022-32684-410.1594/PANGAEA.92303510.5067/AQUA/MODIS/L3M/CHL/201810.5067/AQUA/MODIS/L3M/PIC/201810.5067/AQUA/MODIS/L3M/POC/201810.5194/essd-11-1437-201910.5194/essd-12-3653-2020 2024-08-27T23:49:29Z The Deep-sea Sponge Microbiome Project is a large-scale study, integrating 16S amplicon sequencing data of seawater, sediment, and sponges, with a large set of ecological and physical metadata. The present dataset includes NCBI-accession numbers, sample collection details, and diverse measurements, adding up to 50 entries for each of the 1546 covered samples. Dataset Arctic Ocean PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(4.181100,-4.092100,86.866000,-74.992700) |