Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates,...
Main Authors: | , , , , , , , , , , |
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Format: | Dataset |
Language: | English |
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PANGAEA
2020
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 |
id |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920866 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
05-LC-02 05-LC-03 05-LC-04 05-LC-05 05-LC-06 05-LC-07 05-LC-08 05-LC-10 05-LC-11 05-Yak-03 05-Yak-05 05-Yak-06 05-Yak-08 05-Yak-10 05-Yak-11 05-Yak-14 05-Yak-16 05-Yak-17 05-Yak-18 05-Yak-19 05-Yak-21 05-Yak-23 05-Yak-24 05-Yak-25 05-Yak-26 05-Yak-27 05-Yak-28 07-SA-07 07-SA-21 07-SA-23 07-SA-26 07-SA-31 07-SA-33 07-SA-34 08-KO-01 08-KO-03 08-KO-04 08-KO-06 08-KO-07 08-KO-09 08-KO-11 08-KO-12 08-KO-13 08-KO-14 08-KO-15 08-KO-16 08-KO-17 08-KO-18 08-KO-19 08-KO-20 |
spellingShingle |
05-LC-02 05-LC-03 05-LC-04 05-LC-05 05-LC-06 05-LC-07 05-LC-08 05-LC-10 05-LC-11 05-Yak-03 05-Yak-05 05-Yak-06 05-Yak-08 05-Yak-10 05-Yak-11 05-Yak-14 05-Yak-16 05-Yak-17 05-Yak-18 05-Yak-19 05-Yak-21 05-Yak-23 05-Yak-24 05-Yak-25 05-Yak-26 05-Yak-27 05-Yak-28 07-SA-07 07-SA-21 07-SA-23 07-SA-26 07-SA-31 07-SA-33 07-SA-34 08-KO-01 08-KO-03 08-KO-04 08-KO-06 08-KO-07 08-KO-09 08-KO-11 08-KO-12 08-KO-13 08-KO-14 08-KO-15 08-KO-16 08-KO-17 08-KO-18 08-KO-19 08-KO-20 Stoof-Leichsenring, Kathleen Rosmarie Liu, Sisi Jia, Weihan Li, Kai Pestryakova, Luidmila A Mischke, Steffen Cao, Xianyong Li, Xingqi Ni, Jian Neuhaus, Stefan Herzschuh, Ulrike Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
topic_facet |
05-LC-02 05-LC-03 05-LC-04 05-LC-05 05-LC-06 05-LC-07 05-LC-08 05-LC-10 05-LC-11 05-Yak-03 05-Yak-05 05-Yak-06 05-Yak-08 05-Yak-10 05-Yak-11 05-Yak-14 05-Yak-16 05-Yak-17 05-Yak-18 05-Yak-19 05-Yak-21 05-Yak-23 05-Yak-24 05-Yak-25 05-Yak-26 05-Yak-27 05-Yak-28 07-SA-07 07-SA-21 07-SA-23 07-SA-26 07-SA-31 07-SA-33 07-SA-34 08-KO-01 08-KO-03 08-KO-04 08-KO-06 08-KO-07 08-KO-09 08-KO-11 08-KO-12 08-KO-13 08-KO-14 08-KO-15 08-KO-16 08-KO-17 08-KO-18 08-KO-19 08-KO-20 |
description |
Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates, elevation, type of sample material, geographic region, water depth (at which samples were taken), pH, water conductivity, mean annual precipitation (MAP), mean annual temperature (MAP), July and January mean temperature. Annual mean temperature, mean temperature in July and January, and mean annual precipitation were downloaded from WorldClim 2 (www.worldclim.org), and are based on the average climate data for the years 1970–2000 at a spatial resolution of 30 seconds (ca. 1 km^2^). The site-specific climate data was interpolated to the location area by using the R packages raster Hijmans 2020. Hijmans RJ (2020) raster: Geographic Data Analysis and Modeling. R package version 3.1-5. URL: https://CRAN.R-project.org/package=raster. Plant diversity in the Arctic and at high altitudes strongly depends on and rebounds to climatic and environmental variability and is nowadays tremendously impacted by recent climate warming. Therefore, past changes in plant diversity in the high Arctic and high-altitude regions are used to infer climatic and environmental changes through time and allow future predictions. Sedimentary DNA is an established proxy for the detection of local plant diversity in lake sediments, but still relationships between environmental conditions and preservation of the plant sedDNA proxy are far from being fully understood. Studying modern relationships between environmental conditions and plant sedDNA will improve our understanding under which conditions sedDNA is well-preserved helping to a.) evaluate suitable localities for sedDNA approaches, b.) provide analogues for preservation conditions and c.) conduct reconstruction of plant diversity and climate change. This study investigates modern plant diversity ... |
format |
Dataset |
author |
Stoof-Leichsenring, Kathleen Rosmarie Liu, Sisi Jia, Weihan Li, Kai Pestryakova, Luidmila A Mischke, Steffen Cao, Xianyong Li, Xingqi Ni, Jian Neuhaus, Stefan Herzschuh, Ulrike |
author_facet |
Stoof-Leichsenring, Kathleen Rosmarie Liu, Sisi Jia, Weihan Li, Kai Pestryakova, Luidmila A Mischke, Steffen Cao, Xianyong Li, Xingqi Ni, Jian Neuhaus, Stefan Herzschuh, Ulrike |
author_sort |
Stoof-Leichsenring, Kathleen Rosmarie |
title |
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
title_short |
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
title_full |
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
title_fullStr |
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
title_full_unstemmed |
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) |
title_sort |
plant diversity in sedimentary dna obtained from high-latitude (siberia) and high-altitude lakes (china) |
publisher |
PANGAEA |
publishDate |
2020 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 |
op_coverage |
MEDIAN LATITUDE: 53.029819 * MEDIAN LONGITUDE: 118.194187 * SOUTH-BOUND LATITUDE: 25.642230 * WEST-BOUND LONGITUDE: 81.244700 * NORTH-BOUND LATITUDE: 73.387090 * EAST-BOUND LONGITUDE: 168.738370 * DATE/TIME START: 2005-07-10T20:00:00 * DATE/TIME END: 2016-07-13T00:00:00 * MINIMUM DEPTH, water: 0.15 m * MAXIMUM DEPTH, water: 78.90 m |
long_lat |
ENVELOPE(81.244700,168.738370,73.387090,25.642230) |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic Climate change Siberia |
genre_facet |
Arctic Climate change Siberia |
op_relation |
Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (2020): Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-elevation lakes (China). Biodiversity Data Journal, 8, e57089, https://doi.org/10.3897/BDJ.8.e57089 Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (accepted): Plant diversity data from modern sedimentary DNA of lakes in Siberia and China. Dryad, https://doi.org/10.5061/dryad.k6djh9w4r https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.92086610.3897/BDJ.8.e5708910.5061/dryad.k6djh9w4r |
_version_ |
1811635989834104832 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920866 2024-09-30T14:31:26+00:00 Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) Stoof-Leichsenring, Kathleen Rosmarie Liu, Sisi Jia, Weihan Li, Kai Pestryakova, Luidmila A Mischke, Steffen Cao, Xianyong Li, Xingqi Ni, Jian Neuhaus, Stefan Herzschuh, Ulrike MEDIAN LATITUDE: 53.029819 * MEDIAN LONGITUDE: 118.194187 * SOUTH-BOUND LATITUDE: 25.642230 * WEST-BOUND LONGITUDE: 81.244700 * NORTH-BOUND LATITUDE: 73.387090 * EAST-BOUND LONGITUDE: 168.738370 * DATE/TIME START: 2005-07-10T20:00:00 * DATE/TIME END: 2016-07-13T00:00:00 * MINIMUM DEPTH, water: 0.15 m * MAXIMUM DEPTH, water: 78.90 m 2020 text/tab-separated-values, 4325 data points https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 en eng PANGAEA Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (2020): Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-elevation lakes (China). Biodiversity Data Journal, 8, e57089, https://doi.org/10.3897/BDJ.8.e57089 Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (accepted): Plant diversity data from modern sedimentary DNA of lakes in Siberia and China. Dryad, https://doi.org/10.5061/dryad.k6djh9w4r https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess 05-LC-02 05-LC-03 05-LC-04 05-LC-05 05-LC-06 05-LC-07 05-LC-08 05-LC-10 05-LC-11 05-Yak-03 05-Yak-05 05-Yak-06 05-Yak-08 05-Yak-10 05-Yak-11 05-Yak-14 05-Yak-16 05-Yak-17 05-Yak-18 05-Yak-19 05-Yak-21 05-Yak-23 05-Yak-24 05-Yak-25 05-Yak-26 05-Yak-27 05-Yak-28 07-SA-07 07-SA-21 07-SA-23 07-SA-26 07-SA-31 07-SA-33 07-SA-34 08-KO-01 08-KO-03 08-KO-04 08-KO-06 08-KO-07 08-KO-09 08-KO-11 08-KO-12 08-KO-13 08-KO-14 08-KO-15 08-KO-16 08-KO-17 08-KO-18 08-KO-19 08-KO-20 dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.92086610.3897/BDJ.8.e5708910.5061/dryad.k6djh9w4r 2024-09-03T23:52:03Z Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates, elevation, type of sample material, geographic region, water depth (at which samples were taken), pH, water conductivity, mean annual precipitation (MAP), mean annual temperature (MAP), July and January mean temperature. Annual mean temperature, mean temperature in July and January, and mean annual precipitation were downloaded from WorldClim 2 (www.worldclim.org), and are based on the average climate data for the years 1970–2000 at a spatial resolution of 30 seconds (ca. 1 km^2^). The site-specific climate data was interpolated to the location area by using the R packages raster Hijmans 2020. Hijmans RJ (2020) raster: Geographic Data Analysis and Modeling. R package version 3.1-5. URL: https://CRAN.R-project.org/package=raster. Plant diversity in the Arctic and at high altitudes strongly depends on and rebounds to climatic and environmental variability and is nowadays tremendously impacted by recent climate warming. Therefore, past changes in plant diversity in the high Arctic and high-altitude regions are used to infer climatic and environmental changes through time and allow future predictions. Sedimentary DNA is an established proxy for the detection of local plant diversity in lake sediments, but still relationships between environmental conditions and preservation of the plant sedDNA proxy are far from being fully understood. Studying modern relationships between environmental conditions and plant sedDNA will improve our understanding under which conditions sedDNA is well-preserved helping to a.) evaluate suitable localities for sedDNA approaches, b.) provide analogues for preservation conditions and c.) conduct reconstruction of plant diversity and climate change. This study investigates modern plant diversity ... Dataset Arctic Climate change Siberia PANGAEA - Data Publisher for Earth & Environmental Science Arctic ENVELOPE(81.244700,168.738370,73.387090,25.642230) |