Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)

Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates,...

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Main Authors: Stoof-Leichsenring, Kathleen Rosmarie, Liu, Sisi, Jia, Weihan, Li, Kai, Pestryakova, Luidmila A, Mischke, Steffen, Cao, Xianyong, Li, Xingqi, Ni, Jian, Neuhaus, Stefan, Herzschuh, Ulrike
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.920866
https://doi.org/10.1594/PANGAEA.920866
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920866
record_format openpolar
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic 05-LC-02
05-LC-03
05-LC-04
05-LC-05
05-LC-06
05-LC-07
05-LC-08
05-LC-10
05-LC-11
05-Yak-03
05-Yak-05
05-Yak-06
05-Yak-08
05-Yak-10
05-Yak-11
05-Yak-14
05-Yak-16
05-Yak-17
05-Yak-18
05-Yak-19
05-Yak-21
05-Yak-23
05-Yak-24
05-Yak-25
05-Yak-26
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07-SA-07
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07-SA-34
08-KO-01
08-KO-03
08-KO-04
08-KO-06
08-KO-07
08-KO-09
08-KO-11
08-KO-12
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08-KO-14
08-KO-15
08-KO-16
08-KO-17
08-KO-18
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08-KO-20
spellingShingle 05-LC-02
05-LC-03
05-LC-04
05-LC-05
05-LC-06
05-LC-07
05-LC-08
05-LC-10
05-LC-11
05-Yak-03
05-Yak-05
05-Yak-06
05-Yak-08
05-Yak-10
05-Yak-11
05-Yak-14
05-Yak-16
05-Yak-17
05-Yak-18
05-Yak-19
05-Yak-21
05-Yak-23
05-Yak-24
05-Yak-25
05-Yak-26
05-Yak-27
05-Yak-28
07-SA-07
07-SA-21
07-SA-23
07-SA-26
07-SA-31
07-SA-33
07-SA-34
08-KO-01
08-KO-03
08-KO-04
08-KO-06
08-KO-07
08-KO-09
08-KO-11
08-KO-12
08-KO-13
08-KO-14
08-KO-15
08-KO-16
08-KO-17
08-KO-18
08-KO-19
08-KO-20
Stoof-Leichsenring, Kathleen Rosmarie
Liu, Sisi
Jia, Weihan
Li, Kai
Pestryakova, Luidmila A
Mischke, Steffen
Cao, Xianyong
Li, Xingqi
Ni, Jian
Neuhaus, Stefan
Herzschuh, Ulrike
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
topic_facet 05-LC-02
05-LC-03
05-LC-04
05-LC-05
05-LC-06
05-LC-07
05-LC-08
05-LC-10
05-LC-11
05-Yak-03
05-Yak-05
05-Yak-06
05-Yak-08
05-Yak-10
05-Yak-11
05-Yak-14
05-Yak-16
05-Yak-17
05-Yak-18
05-Yak-19
05-Yak-21
05-Yak-23
05-Yak-24
05-Yak-25
05-Yak-26
05-Yak-27
05-Yak-28
07-SA-07
07-SA-21
07-SA-23
07-SA-26
07-SA-31
07-SA-33
07-SA-34
08-KO-01
08-KO-03
08-KO-04
08-KO-06
08-KO-07
08-KO-09
08-KO-11
08-KO-12
08-KO-13
08-KO-14
08-KO-15
08-KO-16
08-KO-17
08-KO-18
08-KO-19
08-KO-20
description Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates, elevation, type of sample material, geographic region, water depth (at which samples were taken), pH, water conductivity, mean annual precipitation (MAP), mean annual temperature (MAP), July and January mean temperature. Annual mean temperature, mean temperature in July and January, and mean annual precipitation were downloaded from WorldClim 2 (www.worldclim.org), and are based on the average climate data for the years 1970–2000 at a spatial resolution of 30 seconds (ca. 1 km^2^). The site-specific climate data was interpolated to the location area by using the R packages raster Hijmans 2020. Hijmans RJ (2020) raster: Geographic Data Analysis and Modeling. R package version 3.1-5. URL: https://CRAN.R-project.org/package=raster. Plant diversity in the Arctic and at high altitudes strongly depends on and rebounds to climatic and environmental variability and is nowadays tremendously impacted by recent climate warming. Therefore, past changes in plant diversity in the high Arctic and high-altitude regions are used to infer climatic and environmental changes through time and allow future predictions. Sedimentary DNA is an established proxy for the detection of local plant diversity in lake sediments, but still relationships between environmental conditions and preservation of the plant sedDNA proxy are far from being fully understood. Studying modern relationships between environmental conditions and plant sedDNA will improve our understanding under which conditions sedDNA is well-preserved helping to a.) evaluate suitable localities for sedDNA approaches, b.) provide analogues for preservation conditions and c.) conduct reconstruction of plant diversity and climate change. This study investigates modern plant diversity ...
format Dataset
author Stoof-Leichsenring, Kathleen Rosmarie
Liu, Sisi
Jia, Weihan
Li, Kai
Pestryakova, Luidmila A
Mischke, Steffen
Cao, Xianyong
Li, Xingqi
Ni, Jian
Neuhaus, Stefan
Herzschuh, Ulrike
author_facet Stoof-Leichsenring, Kathleen Rosmarie
Liu, Sisi
Jia, Weihan
Li, Kai
Pestryakova, Luidmila A
Mischke, Steffen
Cao, Xianyong
Li, Xingqi
Ni, Jian
Neuhaus, Stefan
Herzschuh, Ulrike
author_sort Stoof-Leichsenring, Kathleen Rosmarie
title Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
title_short Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
title_full Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
title_fullStr Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
title_full_unstemmed Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China)
title_sort plant diversity in sedimentary dna obtained from high-latitude (siberia) and high-altitude lakes (china)
publisher PANGAEA
publishDate 2020
url https://doi.pangaea.de/10.1594/PANGAEA.920866
https://doi.org/10.1594/PANGAEA.920866
op_coverage MEDIAN LATITUDE: 53.029819 * MEDIAN LONGITUDE: 118.194187 * SOUTH-BOUND LATITUDE: 25.642230 * WEST-BOUND LONGITUDE: 81.244700 * NORTH-BOUND LATITUDE: 73.387090 * EAST-BOUND LONGITUDE: 168.738370 * DATE/TIME START: 2005-07-10T20:00:00 * DATE/TIME END: 2016-07-13T00:00:00 * MINIMUM DEPTH, water: 0.15 m * MAXIMUM DEPTH, water: 78.90 m
long_lat ENVELOPE(81.244700,168.738370,73.387090,25.642230)
geographic Arctic
geographic_facet Arctic
genre Arctic
Climate change
Siberia
genre_facet Arctic
Climate change
Siberia
op_relation Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (2020): Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-elevation lakes (China). Biodiversity Data Journal, 8, e57089, https://doi.org/10.3897/BDJ.8.e57089
Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (accepted): Plant diversity data from modern sedimentary DNA of lakes in Siberia and China. Dryad, https://doi.org/10.5061/dryad.k6djh9w4r
https://doi.pangaea.de/10.1594/PANGAEA.920866
https://doi.org/10.1594/PANGAEA.920866
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.92086610.3897/BDJ.8.e5708910.5061/dryad.k6djh9w4r
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spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920866 2024-09-30T14:31:26+00:00 Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-altitude lakes (China) Stoof-Leichsenring, Kathleen Rosmarie Liu, Sisi Jia, Weihan Li, Kai Pestryakova, Luidmila A Mischke, Steffen Cao, Xianyong Li, Xingqi Ni, Jian Neuhaus, Stefan Herzschuh, Ulrike MEDIAN LATITUDE: 53.029819 * MEDIAN LONGITUDE: 118.194187 * SOUTH-BOUND LATITUDE: 25.642230 * WEST-BOUND LONGITUDE: 81.244700 * NORTH-BOUND LATITUDE: 73.387090 * EAST-BOUND LONGITUDE: 168.738370 * DATE/TIME START: 2005-07-10T20:00:00 * DATE/TIME END: 2016-07-13T00:00:00 * MINIMUM DEPTH, water: 0.15 m * MAXIMUM DEPTH, water: 78.90 m 2020 text/tab-separated-values, 4325 data points https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 en eng PANGAEA Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (2020): Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and high-elevation lakes (China). Biodiversity Data Journal, 8, e57089, https://doi.org/10.3897/BDJ.8.e57089 Stoof-Leichsenring, Kathleen Rosmarie; Liu, Sisi; Jia, Weihan; Li, Kai; Pestryakova, Luidmila A; Mischke, Steffen; Cao, Xianyong; Liu, Xingqi; Ni, Jian; Neuhaus, Stefan; Herzschuh, Ulrike (accepted): Plant diversity data from modern sedimentary DNA of lakes in Siberia and China. Dryad, https://doi.org/10.5061/dryad.k6djh9w4r https://doi.pangaea.de/10.1594/PANGAEA.920866 https://doi.org/10.1594/PANGAEA.920866 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess 05-LC-02 05-LC-03 05-LC-04 05-LC-05 05-LC-06 05-LC-07 05-LC-08 05-LC-10 05-LC-11 05-Yak-03 05-Yak-05 05-Yak-06 05-Yak-08 05-Yak-10 05-Yak-11 05-Yak-14 05-Yak-16 05-Yak-17 05-Yak-18 05-Yak-19 05-Yak-21 05-Yak-23 05-Yak-24 05-Yak-25 05-Yak-26 05-Yak-27 05-Yak-28 07-SA-07 07-SA-21 07-SA-23 07-SA-26 07-SA-31 07-SA-33 07-SA-34 08-KO-01 08-KO-03 08-KO-04 08-KO-06 08-KO-07 08-KO-09 08-KO-11 08-KO-12 08-KO-13 08-KO-14 08-KO-15 08-KO-16 08-KO-17 08-KO-18 08-KO-19 08-KO-20 dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.92086610.3897/BDJ.8.e5708910.5061/dryad.k6djh9w4r 2024-09-03T23:52:03Z Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9 samples), 16-KP-03-L10 (5 samples), 16-KP-04-L19 (4 samples). The table includes information about the geographic coordinates, elevation, type of sample material, geographic region, water depth (at which samples were taken), pH, water conductivity, mean annual precipitation (MAP), mean annual temperature (MAP), July and January mean temperature. Annual mean temperature, mean temperature in July and January, and mean annual precipitation were downloaded from WorldClim 2 (www.worldclim.org), and are based on the average climate data for the years 1970–2000 at a spatial resolution of 30 seconds (ca. 1 km^2^). The site-specific climate data was interpolated to the location area by using the R packages raster Hijmans 2020. Hijmans RJ (2020) raster: Geographic Data Analysis and Modeling. R package version 3.1-5. URL: https://CRAN.R-project.org/package=raster. Plant diversity in the Arctic and at high altitudes strongly depends on and rebounds to climatic and environmental variability and is nowadays tremendously impacted by recent climate warming. Therefore, past changes in plant diversity in the high Arctic and high-altitude regions are used to infer climatic and environmental changes through time and allow future predictions. Sedimentary DNA is an established proxy for the detection of local plant diversity in lake sediments, but still relationships between environmental conditions and preservation of the plant sedDNA proxy are far from being fully understood. Studying modern relationships between environmental conditions and plant sedDNA will improve our understanding under which conditions sedDNA is well-preserved helping to a.) evaluate suitable localities for sedDNA approaches, b.) provide analogues for preservation conditions and c.) conduct reconstruction of plant diversity and climate change. This study investigates modern plant diversity ... Dataset Arctic Climate change Siberia PANGAEA - Data Publisher for Earth & Environmental Science Arctic ENVELOPE(81.244700,168.738370,73.387090,25.642230)