Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans

Ocean acidification (OA), the global decrease in surface water pH from absorption of anthropogenic CO2, may put many marine taxa at risk. However, populations that experience extreme localized conditions, and are adapted to these conditions predicted in the global ocean in 2100, may be more tolerant...

Full description

Bibliographic Details
Main Authors: Griffiths, Joanna S, Pan, Tien-Chien Francis, Kelly, Morgan W
Format: Dataset
Language:English
Published: PANGAEA 2019
Subjects:
EXP
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.920209
https://doi.org/10.1594/PANGAEA.920209
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920209
record_format openpolar
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
Animalia
Aragonite saturation state
Balanophyllia elegans
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Dry mass
Event label
EXP
Experiment
Experiment duration
Fatty acids
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Globigerinatheka cf. index
Goleta
Identification
Incubation duration
Laboratory experiment
Lipids
Location
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phospholipid fatty acids
Point_Arena_Cove
Potentiometric
Potentiometric titration
Proteins
Registration number of species
Respiration
spellingShingle Alkalinity
total
Animalia
Aragonite saturation state
Balanophyllia elegans
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Dry mass
Event label
EXP
Experiment
Experiment duration
Fatty acids
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Globigerinatheka cf. index
Goleta
Identification
Incubation duration
Laboratory experiment
Lipids
Location
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phospholipid fatty acids
Point_Arena_Cove
Potentiometric
Potentiometric titration
Proteins
Registration number of species
Respiration
Griffiths, Joanna S
Pan, Tien-Chien Francis
Kelly, Morgan W
Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
topic_facet Alkalinity
total
Animalia
Aragonite saturation state
Balanophyllia elegans
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Dry mass
Event label
EXP
Experiment
Experiment duration
Fatty acids
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Globigerinatheka cf. index
Goleta
Identification
Incubation duration
Laboratory experiment
Lipids
Location
North Pacific
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phospholipid fatty acids
Point_Arena_Cove
Potentiometric
Potentiometric titration
Proteins
Registration number of species
Respiration
description Ocean acidification (OA), the global decrease in surface water pH from absorption of anthropogenic CO2, may put many marine taxa at risk. However, populations that experience extreme localized conditions, and are adapted to these conditions predicted in the global ocean in 2100, may be more tolerant to future OA. By identifying locally adapted populations, researchers can examine the mechanisms used to cope with decreasing pH. One oceanographic process that influences pH, is wind driven upwelling. Here we compare two Californian populations of the coral Balanophyllia elegans from distinct upwelling regimes, and test their physiological and transcriptomic responses to experimental seawater acidification. We measured respiration rates, protein and lipid content, and gene expression in corals from both populations exposed to pH levels of 7.8 and 7.4 for 29 days. Corals from the population that experiences lower pH due to high upwelling, maintained the same respiration rate throughout the exposure. In contrast, corals from the low upwelling site had reduced respiration rates, protein content, and lipid‐class content at low pH exposure, suggesting they have depleted their energy reserves. Using RNA‐Seq, we found that corals from the high upwelling site upregulated genes involved in calcium ion binding and ion transport, most likely related to pH homeostasis and calcification. In contrast, corals from the low upwelling site downregulated stress response genes at low pH exposure. Divergent population responses to low pH observed in B. elegans highlight the importance of multi‐population studies for predicting a species' response to future OA.
format Dataset
author Griffiths, Joanna S
Pan, Tien-Chien Francis
Kelly, Morgan W
author_facet Griffiths, Joanna S
Pan, Tien-Chien Francis
Kelly, Morgan W
author_sort Griffiths, Joanna S
title Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
title_short Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
title_full Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
title_fullStr Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
title_full_unstemmed Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans
title_sort seawater carbonate chemistry and respiration rates, protein and lipid content of balanophyllia elegans
publisher PANGAEA
publishDate 2019
url https://doi.pangaea.de/10.1594/PANGAEA.920209
https://doi.org/10.1594/PANGAEA.920209
op_coverage MEDIAN LATITUDE: 36.665875 * MEDIAN LONGITUDE: -121.806485 * SOUTH-BOUND LATITUDE: 34.417750 * WEST-BOUND LONGITUDE: -123.711441 * NORTH-BOUND LATITUDE: 38.914000 * EAST-BOUND LONGITUDE: -119.901530 * DATE/TIME START: 2016-06-01T00:00:00 * DATE/TIME END: 2016-06-30T00:00:00
long_lat ENVELOPE(-123.711441,-119.901530,38.914000,34.417750)
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation Griffiths, Joanna S; Pan, Tien-Chien Francis; Kelly, Morgan W (2019): Differential responses to ocean acidification between populations of Balanophyllia elegans corals from high and low upwelling environments. Molecular Ecology, https://doi.org/10.1111/mec.15050
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.920209
https://doi.org/10.1594/PANGAEA.920209
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.920209
https://doi.org/10.1111/mec.15050
_version_ 1766158383051702272
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.920209 2023-05-15T17:51:17+02:00 Seawater carbonate chemistry and respiration rates, protein and lipid content of Balanophyllia elegans Griffiths, Joanna S Pan, Tien-Chien Francis Kelly, Morgan W MEDIAN LATITUDE: 36.665875 * MEDIAN LONGITUDE: -121.806485 * SOUTH-BOUND LATITUDE: 34.417750 * WEST-BOUND LONGITUDE: -123.711441 * NORTH-BOUND LATITUDE: 38.914000 * EAST-BOUND LONGITUDE: -119.901530 * DATE/TIME START: 2016-06-01T00:00:00 * DATE/TIME END: 2016-06-30T00:00:00 2019-07-16 text/tab-separated-values, 3168 data points https://doi.pangaea.de/10.1594/PANGAEA.920209 https://doi.org/10.1594/PANGAEA.920209 en eng PANGAEA Griffiths, Joanna S; Pan, Tien-Chien Francis; Kelly, Morgan W (2019): Differential responses to ocean acidification between populations of Balanophyllia elegans corals from high and low upwelling environments. Molecular Ecology, https://doi.org/10.1111/mec.15050 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.920209 https://doi.org/10.1594/PANGAEA.920209 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Alkalinity total Animalia Aragonite saturation state Balanophyllia elegans Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2calc Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cnidaria Coast and continental shelf Dry mass Event label EXP Experiment Experiment duration Fatty acids Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Globigerinatheka cf. index Goleta Identification Incubation duration Laboratory experiment Lipids Location North Pacific OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phospholipid fatty acids Point_Arena_Cove Potentiometric Potentiometric titration Proteins Registration number of species Respiration Dataset 2019 ftpangaea https://doi.org/10.1594/PANGAEA.920209 https://doi.org/10.1111/mec.15050 2023-01-20T09:13:47Z Ocean acidification (OA), the global decrease in surface water pH from absorption of anthropogenic CO2, may put many marine taxa at risk. However, populations that experience extreme localized conditions, and are adapted to these conditions predicted in the global ocean in 2100, may be more tolerant to future OA. By identifying locally adapted populations, researchers can examine the mechanisms used to cope with decreasing pH. One oceanographic process that influences pH, is wind driven upwelling. Here we compare two Californian populations of the coral Balanophyllia elegans from distinct upwelling regimes, and test their physiological and transcriptomic responses to experimental seawater acidification. We measured respiration rates, protein and lipid content, and gene expression in corals from both populations exposed to pH levels of 7.8 and 7.4 for 29 days. Corals from the population that experiences lower pH due to high upwelling, maintained the same respiration rate throughout the exposure. In contrast, corals from the low upwelling site had reduced respiration rates, protein content, and lipid‐class content at low pH exposure, suggesting they have depleted their energy reserves. Using RNA‐Seq, we found that corals from the high upwelling site upregulated genes involved in calcium ion binding and ion transport, most likely related to pH homeostasis and calcification. In contrast, corals from the low upwelling site downregulated stress response genes at low pH exposure. Divergent population responses to low pH observed in B. elegans highlight the importance of multi‐population studies for predicting a species' response to future OA. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific ENVELOPE(-123.711441,-119.901530,38.914000,34.417750)