Seawater carbonate chemistry and diatom silica production in the Southern Ocean

Diatoms, large bloom-forming marine microorganisms, build frustules out of silicate, which ballasts the cells and aids their export to the deep ocean. This unique physiology forges an important link between the marine silicon and carbon cycles. However, the effect of ocean acidification on the silic...

Full description

Bibliographic Details
Main Authors: Petrou, Katherina, Baker, Kirralee G, Nielsen, Daniel A, Hancock, Alyce M, Schulz, Kai Georg, Davidson, Andrew T
Format: Dataset
Language:English
Published: PANGAEA 2019
Subjects:
EXP
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.914329
https://doi.org/10.1594/PANGAEA.914329
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.914329
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.914329 2023-05-15T14:04:58+02:00 Seawater carbonate chemistry and diatom silica production in the Southern Ocean Petrou, Katherina Baker, Kirralee G Nielsen, Daniel A Hancock, Alyce M Schulz, Kai Georg Davidson, Andrew T LATITUDE: -68.583330 * LONGITUDE: 77.966670 2019-04-02 text/tab-separated-values, 104844 data points https://doi.pangaea.de/10.1594/PANGAEA.914329 https://doi.org/10.1594/PANGAEA.914329 en eng PANGAEA Petrou, Katherina; Baker, Kirralee G; Nielsen, Daniel A; Hancock, Alyce M; Schulz, Kai Georg; Davidson, Andrew T (2019): Acidification diminishes diatom silica production in the Southern Ocean. Nature Climate Change, 9(10), 781-786, https://doi.org/10.1038/s41558-019-0557-y Petrou, Katherina (2019): Antarctic diatom silicification diminishes under ocean acidification. Australian Antarctic Data Centre, https://doi.org/10.26179/5c3e745a9b071 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.914329 https://doi.org/10.1594/PANGAEA.914329 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Abbreviation Alkalinity total Antarctic Aragonite saturation state Bicarbonate ion Biogenic silica Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell biovolume Chlorophyll a Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Davis_Station_OA Entire community EXP Experiment Experiment day Fragilariopsis curta Fragilariopsis cylindrus Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Maximum photochemical quantum yield of photosystem II Nitrate and Nitrite Number of cells OA-ICC Ocean Acidification International Coordination Centre Other metabolic rates Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phosphorus reactive soluble Polar Primary production/Photosynthesis Proboscia truncata Proton concentration Pseudonitzschia turgiduloides Registration number of species Replicate Salinity Silicate Silicification Dataset 2019 ftpangaea https://doi.org/10.1594/PANGAEA.914329 https://doi.org/10.1038/s41558-019-0557-y https://doi.org/10.26179/5c3e745a9b071 2023-01-20T09:13:24Z Diatoms, large bloom-forming marine microorganisms, build frustules out of silicate, which ballasts the cells and aids their export to the deep ocean. This unique physiology forges an important link between the marine silicon and carbon cycles. However, the effect of ocean acidification on the silicification of diatoms is unclear. Here we show that diatom silicification strongly diminishes with increased acidity in a natural Antarctic community. Analyses of single cells from within the community reveal that the effect of reduced pH on silicification differs among taxa, with several species having significantly reduced silica incorporation at CO2 levels equivalent to those projected for 2100. These findings suggest that, before the end of this century, ocean acidification may influence the carbon and silicon cycle by both altering the composition of the diatom assemblages and reducing cell ballasting, which will probably alter vertical flux of these elements to the deep ocean. Dataset Antarc* Antarctic Ocean acidification Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science Antarctic Southern Ocean ENVELOPE(77.966670,77.966670,-68.583330,-68.583330)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Abbreviation
Alkalinity
total
Antarctic
Aragonite saturation state
Bicarbonate ion
Biogenic silica
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Chlorophyll a
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Davis_Station_OA
Entire community
EXP
Experiment
Experiment day
Fragilariopsis curta
Fragilariopsis cylindrus
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Maximum photochemical quantum yield of photosystem II
Nitrate and Nitrite
Number of cells
OA-ICC
Ocean Acidification International Coordination Centre
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phosphorus
reactive soluble
Polar
Primary production/Photosynthesis
Proboscia truncata
Proton concentration
Pseudonitzschia turgiduloides
Registration number of species
Replicate
Salinity
Silicate
Silicification
spellingShingle Abbreviation
Alkalinity
total
Antarctic
Aragonite saturation state
Bicarbonate ion
Biogenic silica
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Chlorophyll a
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Davis_Station_OA
Entire community
EXP
Experiment
Experiment day
Fragilariopsis curta
Fragilariopsis cylindrus
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Maximum photochemical quantum yield of photosystem II
Nitrate and Nitrite
Number of cells
OA-ICC
Ocean Acidification International Coordination Centre
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phosphorus
reactive soluble
Polar
Primary production/Photosynthesis
Proboscia truncata
Proton concentration
Pseudonitzschia turgiduloides
Registration number of species
Replicate
Salinity
Silicate
Silicification
Petrou, Katherina
Baker, Kirralee G
Nielsen, Daniel A
Hancock, Alyce M
Schulz, Kai Georg
Davidson, Andrew T
Seawater carbonate chemistry and diatom silica production in the Southern Ocean
topic_facet Abbreviation
Alkalinity
total
Antarctic
Aragonite saturation state
Bicarbonate ion
Biogenic silica
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Chlorophyll a
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Davis_Station_OA
Entire community
EXP
Experiment
Experiment day
Fragilariopsis curta
Fragilariopsis cylindrus
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Maximum photochemical quantum yield of photosystem II
Nitrate and Nitrite
Number of cells
OA-ICC
Ocean Acidification International Coordination Centre
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phosphorus
reactive soluble
Polar
Primary production/Photosynthesis
Proboscia truncata
Proton concentration
Pseudonitzschia turgiduloides
Registration number of species
Replicate
Salinity
Silicate
Silicification
description Diatoms, large bloom-forming marine microorganisms, build frustules out of silicate, which ballasts the cells and aids their export to the deep ocean. This unique physiology forges an important link between the marine silicon and carbon cycles. However, the effect of ocean acidification on the silicification of diatoms is unclear. Here we show that diatom silicification strongly diminishes with increased acidity in a natural Antarctic community. Analyses of single cells from within the community reveal that the effect of reduced pH on silicification differs among taxa, with several species having significantly reduced silica incorporation at CO2 levels equivalent to those projected for 2100. These findings suggest that, before the end of this century, ocean acidification may influence the carbon and silicon cycle by both altering the composition of the diatom assemblages and reducing cell ballasting, which will probably alter vertical flux of these elements to the deep ocean.
format Dataset
author Petrou, Katherina
Baker, Kirralee G
Nielsen, Daniel A
Hancock, Alyce M
Schulz, Kai Georg
Davidson, Andrew T
author_facet Petrou, Katherina
Baker, Kirralee G
Nielsen, Daniel A
Hancock, Alyce M
Schulz, Kai Georg
Davidson, Andrew T
author_sort Petrou, Katherina
title Seawater carbonate chemistry and diatom silica production in the Southern Ocean
title_short Seawater carbonate chemistry and diatom silica production in the Southern Ocean
title_full Seawater carbonate chemistry and diatom silica production in the Southern Ocean
title_fullStr Seawater carbonate chemistry and diatom silica production in the Southern Ocean
title_full_unstemmed Seawater carbonate chemistry and diatom silica production in the Southern Ocean
title_sort seawater carbonate chemistry and diatom silica production in the southern ocean
publisher PANGAEA
publishDate 2019
url https://doi.pangaea.de/10.1594/PANGAEA.914329
https://doi.org/10.1594/PANGAEA.914329
op_coverage LATITUDE: -68.583330 * LONGITUDE: 77.966670
long_lat ENVELOPE(77.966670,77.966670,-68.583330,-68.583330)
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Ocean acidification
Southern Ocean
genre_facet Antarc*
Antarctic
Ocean acidification
Southern Ocean
op_relation Petrou, Katherina; Baker, Kirralee G; Nielsen, Daniel A; Hancock, Alyce M; Schulz, Kai Georg; Davidson, Andrew T (2019): Acidification diminishes diatom silica production in the Southern Ocean. Nature Climate Change, 9(10), 781-786, https://doi.org/10.1038/s41558-019-0557-y
Petrou, Katherina (2019): Antarctic diatom silicification diminishes under ocean acidification. Australian Antarctic Data Centre, https://doi.org/10.26179/5c3e745a9b071
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.914329
https://doi.org/10.1594/PANGAEA.914329
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.914329
https://doi.org/10.1038/s41558-019-0557-y
https://doi.org/10.26179/5c3e745a9b071
_version_ 1766276499817627648