Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017

Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of gene...

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Main Authors: Busch, Kathrin, Beazley, Lindsay, Kenchington, Ellen L, Whoriskey, Frederick, Slaby, Beate M, Hentschel, Ute
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
BC
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.913907
https://doi.org/10.1594/PANGAEA.913907
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.913907
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.913907 2024-09-15T18:22:55+00:00 Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 Busch, Kathrin Beazley, Lindsay Kenchington, Ellen L Whoriskey, Frederick Slaby, Beate M Hentschel, Ute MEDIAN LATITUDE: 44.046375 * MEDIAN LONGITUDE: -62.944014 * SOUTH-BOUND LATITUDE: 43.871200 * WEST-BOUND LONGITUDE: -63.204200 * NORTH-BOUND LATITUDE: 44.320500 * EAST-BOUND LONGITUDE: -62.601500 * DATE/TIME START: 2016-07-20T16:30:12 * DATE/TIME END: 2017-09-06T23:09:42 * MINIMUM DEPTH, water: 155 m * MAXIMUM DEPTH, water: 205 m 2020 text/tab-separated-values, 720 data points https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 en eng PANGAEA Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities. Conservation Genetics, 21(6), 1001-1010, https://doi.org/10.1007/s10592-020-01305-2 Bayer, Kristina; Busch, Kathrin; Kenchington, Ellen L; Beazley, Lindsay; Franzenburg, Sören; Michels, Jan; Hentschel, Ute; Slaby, Beate M (2020): Metadata and NCBI-Accession numbers of Vazella pourtalesii metagenomes from the Scotian Shelf (Canada) in summer 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.917599 https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Accession number genetics Anthropogenic impact Area/locality BC Box corer Campaign CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type Event label glass sponge grounds HUD16/19_010 HUD16/19_012 HUD16/19_013 HUD16/19_383 HUD16/19_387 HUD16/19_391 HUD16/19_392 HUD16/19_395 HUD2016019 Hudson Identification LATITUDE LONGITUDE marine litter Martha L. Black microbiome MLB2017001 MLB2017001_004 MLB2017001_005 MLB2017001_006 MLB2017001_015 MLB2017001_017 MLB2017001_020 MOOR Mooring North Atlantic Ocean Ocean Tracking Network (OTN) OTNMoor_275 Remote operated platform for oceanography Remote operated vehicle ROPOS ROPOS 2028 ROPOS 2029 ROPOS 2030 dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.91390710.1007/s10592-020-01305-210.1594/PANGAEA.917599 2024-08-21T00:02:27Z Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 32 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada. Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-63.204200,-62.601500,44.320500,43.871200)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Accession number
genetics
Anthropogenic impact
Area/locality
BC
Box corer
Campaign
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
Event label
glass sponge grounds
HUD16/19_010
HUD16/19_012
HUD16/19_013
HUD16/19_383
HUD16/19_387
HUD16/19_391
HUD16/19_392
HUD16/19_395
HUD2016019
Hudson
Identification
LATITUDE
LONGITUDE
marine litter
Martha L. Black
microbiome
MLB2017001
MLB2017001_004
MLB2017001_005
MLB2017001_006
MLB2017001_015
MLB2017001_017
MLB2017001_020
MOOR
Mooring
North Atlantic Ocean
Ocean Tracking Network (OTN)
OTNMoor_275
Remote operated platform for oceanography
Remote operated vehicle
ROPOS
ROPOS 2028
ROPOS 2029
ROPOS 2030
spellingShingle Accession number
genetics
Anthropogenic impact
Area/locality
BC
Box corer
Campaign
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
Event label
glass sponge grounds
HUD16/19_010
HUD16/19_012
HUD16/19_013
HUD16/19_383
HUD16/19_387
HUD16/19_391
HUD16/19_392
HUD16/19_395
HUD2016019
Hudson
Identification
LATITUDE
LONGITUDE
marine litter
Martha L. Black
microbiome
MLB2017001
MLB2017001_004
MLB2017001_005
MLB2017001_006
MLB2017001_015
MLB2017001_017
MLB2017001_020
MOOR
Mooring
North Atlantic Ocean
Ocean Tracking Network (OTN)
OTNMoor_275
Remote operated platform for oceanography
Remote operated vehicle
ROPOS
ROPOS 2028
ROPOS 2029
ROPOS 2030
Busch, Kathrin
Beazley, Lindsay
Kenchington, Ellen L
Whoriskey, Frederick
Slaby, Beate M
Hentschel, Ute
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
topic_facet Accession number
genetics
Anthropogenic impact
Area/locality
BC
Box corer
Campaign
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
Event label
glass sponge grounds
HUD16/19_010
HUD16/19_012
HUD16/19_013
HUD16/19_383
HUD16/19_387
HUD16/19_391
HUD16/19_392
HUD16/19_395
HUD2016019
Hudson
Identification
LATITUDE
LONGITUDE
marine litter
Martha L. Black
microbiome
MLB2017001
MLB2017001_004
MLB2017001_005
MLB2017001_006
MLB2017001_015
MLB2017001_017
MLB2017001_020
MOOR
Mooring
North Atlantic Ocean
Ocean Tracking Network (OTN)
OTNMoor_275
Remote operated platform for oceanography
Remote operated vehicle
ROPOS
ROPOS 2028
ROPOS 2029
ROPOS 2030
description Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 32 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada.
format Dataset
author Busch, Kathrin
Beazley, Lindsay
Kenchington, Ellen L
Whoriskey, Frederick
Slaby, Beate M
Hentschel, Ute
author_facet Busch, Kathrin
Beazley, Lindsay
Kenchington, Ellen L
Whoriskey, Frederick
Slaby, Beate M
Hentschel, Ute
author_sort Busch, Kathrin
title Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
title_short Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
title_full Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
title_fullStr Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
title_full_unstemmed Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
title_sort metadata and ncbi-accession numbers of 16s data for seawater, sediment, biofilm, and vazella pourtalesii sponges from the scotian shelf (canada) in summer 2016 and 2017
publisher PANGAEA
publishDate 2020
url https://doi.pangaea.de/10.1594/PANGAEA.913907
https://doi.org/10.1594/PANGAEA.913907
op_coverage MEDIAN LATITUDE: 44.046375 * MEDIAN LONGITUDE: -62.944014 * SOUTH-BOUND LATITUDE: 43.871200 * WEST-BOUND LONGITUDE: -63.204200 * NORTH-BOUND LATITUDE: 44.320500 * EAST-BOUND LONGITUDE: -62.601500 * DATE/TIME START: 2016-07-20T16:30:12 * DATE/TIME END: 2017-09-06T23:09:42 * MINIMUM DEPTH, water: 155 m * MAXIMUM DEPTH, water: 205 m
long_lat ENVELOPE(-63.204200,-62.601500,44.320500,43.871200)
genre North Atlantic
genre_facet North Atlantic
op_relation Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities. Conservation Genetics, 21(6), 1001-1010, https://doi.org/10.1007/s10592-020-01305-2
Bayer, Kristina; Busch, Kathrin; Kenchington, Ellen L; Beazley, Lindsay; Franzenburg, Sören; Michels, Jan; Hentschel, Ute; Slaby, Beate M (2020): Metadata and NCBI-Accession numbers of Vazella pourtalesii metagenomes from the Scotian Shelf (Canada) in summer 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.917599
https://doi.pangaea.de/10.1594/PANGAEA.913907
https://doi.org/10.1594/PANGAEA.913907
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.91390710.1007/s10592-020-01305-210.1594/PANGAEA.917599
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