Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017
Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of gene...
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.913907 2024-09-15T18:22:55+00:00 Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 Busch, Kathrin Beazley, Lindsay Kenchington, Ellen L Whoriskey, Frederick Slaby, Beate M Hentschel, Ute MEDIAN LATITUDE: 44.046375 * MEDIAN LONGITUDE: -62.944014 * SOUTH-BOUND LATITUDE: 43.871200 * WEST-BOUND LONGITUDE: -63.204200 * NORTH-BOUND LATITUDE: 44.320500 * EAST-BOUND LONGITUDE: -62.601500 * DATE/TIME START: 2016-07-20T16:30:12 * DATE/TIME END: 2017-09-06T23:09:42 * MINIMUM DEPTH, water: 155 m * MAXIMUM DEPTH, water: 205 m 2020 text/tab-separated-values, 720 data points https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 en eng PANGAEA Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities. Conservation Genetics, 21(6), 1001-1010, https://doi.org/10.1007/s10592-020-01305-2 Bayer, Kristina; Busch, Kathrin; Kenchington, Ellen L; Beazley, Lindsay; Franzenburg, Sören; Michels, Jan; Hentschel, Ute; Slaby, Beate M (2020): Metadata and NCBI-Accession numbers of Vazella pourtalesii metagenomes from the Scotian Shelf (Canada) in summer 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.917599 https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Accession number genetics Anthropogenic impact Area/locality BC Box corer Campaign CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type Event label glass sponge grounds HUD16/19_010 HUD16/19_012 HUD16/19_013 HUD16/19_383 HUD16/19_387 HUD16/19_391 HUD16/19_392 HUD16/19_395 HUD2016019 Hudson Identification LATITUDE LONGITUDE marine litter Martha L. Black microbiome MLB2017001 MLB2017001_004 MLB2017001_005 MLB2017001_006 MLB2017001_015 MLB2017001_017 MLB2017001_020 MOOR Mooring North Atlantic Ocean Ocean Tracking Network (OTN) OTNMoor_275 Remote operated platform for oceanography Remote operated vehicle ROPOS ROPOS 2028 ROPOS 2029 ROPOS 2030 dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.91390710.1007/s10592-020-01305-210.1594/PANGAEA.917599 2024-08-21T00:02:27Z Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 32 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada. Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-63.204200,-62.601500,44.320500,43.871200) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Accession number genetics Anthropogenic impact Area/locality BC Box corer Campaign CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type Event label glass sponge grounds HUD16/19_010 HUD16/19_012 HUD16/19_013 HUD16/19_383 HUD16/19_387 HUD16/19_391 HUD16/19_392 HUD16/19_395 HUD2016019 Hudson Identification LATITUDE LONGITUDE marine litter Martha L. Black microbiome MLB2017001 MLB2017001_004 MLB2017001_005 MLB2017001_006 MLB2017001_015 MLB2017001_017 MLB2017001_020 MOOR Mooring North Atlantic Ocean Ocean Tracking Network (OTN) OTNMoor_275 Remote operated platform for oceanography Remote operated vehicle ROPOS ROPOS 2028 ROPOS 2029 ROPOS 2030 |
spellingShingle |
Accession number genetics Anthropogenic impact Area/locality BC Box corer Campaign CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type Event label glass sponge grounds HUD16/19_010 HUD16/19_012 HUD16/19_013 HUD16/19_383 HUD16/19_387 HUD16/19_391 HUD16/19_392 HUD16/19_395 HUD2016019 Hudson Identification LATITUDE LONGITUDE marine litter Martha L. Black microbiome MLB2017001 MLB2017001_004 MLB2017001_005 MLB2017001_006 MLB2017001_015 MLB2017001_017 MLB2017001_020 MOOR Mooring North Atlantic Ocean Ocean Tracking Network (OTN) OTNMoor_275 Remote operated platform for oceanography Remote operated vehicle ROPOS ROPOS 2028 ROPOS 2029 ROPOS 2030 Busch, Kathrin Beazley, Lindsay Kenchington, Ellen L Whoriskey, Frederick Slaby, Beate M Hentschel, Ute Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
topic_facet |
Accession number genetics Anthropogenic impact Area/locality BC Box corer Campaign CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type Event label glass sponge grounds HUD16/19_010 HUD16/19_012 HUD16/19_013 HUD16/19_383 HUD16/19_387 HUD16/19_391 HUD16/19_392 HUD16/19_395 HUD2016019 Hudson Identification LATITUDE LONGITUDE marine litter Martha L. Black microbiome MLB2017001 MLB2017001_004 MLB2017001_005 MLB2017001_006 MLB2017001_015 MLB2017001_017 MLB2017001_020 MOOR Mooring North Atlantic Ocean Ocean Tracking Network (OTN) OTNMoor_275 Remote operated platform for oceanography Remote operated vehicle ROPOS ROPOS 2028 ROPOS 2029 ROPOS 2030 |
description |
Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 32 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada. |
format |
Dataset |
author |
Busch, Kathrin Beazley, Lindsay Kenchington, Ellen L Whoriskey, Frederick Slaby, Beate M Hentschel, Ute |
author_facet |
Busch, Kathrin Beazley, Lindsay Kenchington, Ellen L Whoriskey, Frederick Slaby, Beate M Hentschel, Ute |
author_sort |
Busch, Kathrin |
title |
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
title_short |
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
title_full |
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
title_fullStr |
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
title_full_unstemmed |
Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 |
title_sort |
metadata and ncbi-accession numbers of 16s data for seawater, sediment, biofilm, and vazella pourtalesii sponges from the scotian shelf (canada) in summer 2016 and 2017 |
publisher |
PANGAEA |
publishDate |
2020 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 |
op_coverage |
MEDIAN LATITUDE: 44.046375 * MEDIAN LONGITUDE: -62.944014 * SOUTH-BOUND LATITUDE: 43.871200 * WEST-BOUND LONGITUDE: -63.204200 * NORTH-BOUND LATITUDE: 44.320500 * EAST-BOUND LONGITUDE: -62.601500 * DATE/TIME START: 2016-07-20T16:30:12 * DATE/TIME END: 2017-09-06T23:09:42 * MINIMUM DEPTH, water: 155 m * MAXIMUM DEPTH, water: 205 m |
long_lat |
ENVELOPE(-63.204200,-62.601500,44.320500,43.871200) |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities. Conservation Genetics, 21(6), 1001-1010, https://doi.org/10.1007/s10592-020-01305-2 Bayer, Kristina; Busch, Kathrin; Kenchington, Ellen L; Beazley, Lindsay; Franzenburg, Sören; Michels, Jan; Hentschel, Ute; Slaby, Beate M (2020): Metadata and NCBI-Accession numbers of Vazella pourtalesii metagenomes from the Scotian Shelf (Canada) in summer 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.917599 https://doi.pangaea.de/10.1594/PANGAEA.913907 https://doi.org/10.1594/PANGAEA.913907 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.91390710.1007/s10592-020-01305-210.1594/PANGAEA.917599 |
_version_ |
1810462971088863232 |