Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018

Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, comm...

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Main Authors: Busch, Kathrin, Wurz, Erik, Rapp, Hans Tore, Bayer, Kristina, Franke, Andre, Hentschel, Ute
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
AGT
EXP
ROV
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.913890
https://doi.org/10.1594/PANGAEA.913890
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.913890
record_format openpolar
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Accession number
genetics
Agassiz Trawl
AGT
amplicon sequencing
AQUARIUM_C.zetlandica
Area/locality
Campaign
Chloroflexi
Craniella
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
early life stages
Event label
EXP
Experiment
fluorescence in situ hybridisation
G. O. Sars (2003)
GS2017110
GS2017110-15-CTD-05
GS2017110-19-ROV10
GS2018108
GS2018108-17-AGT-01
GS2018108-22-CTD-07
GS2018108-64-ROV-48
GS2018108-66-CTD-16
GS2018108-70-ROV-50
GS2018108-77-CTD-24
GS2018108-78-ROV-52
Identification
LATITUDE
LONGITUDE
Remote operated vehicle
ROV
Sample code/label
Sample position
Sample type
Schultz Bank
SponGES
Stjernsund
symbiosis
vulnerable marine ecosystems
Well-known text
spellingShingle Accession number
genetics
Agassiz Trawl
AGT
amplicon sequencing
AQUARIUM_C.zetlandica
Area/locality
Campaign
Chloroflexi
Craniella
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
early life stages
Event label
EXP
Experiment
fluorescence in situ hybridisation
G. O. Sars (2003)
GS2017110
GS2017110-15-CTD-05
GS2017110-19-ROV10
GS2018108
GS2018108-17-AGT-01
GS2018108-22-CTD-07
GS2018108-64-ROV-48
GS2018108-66-CTD-16
GS2018108-70-ROV-50
GS2018108-77-CTD-24
GS2018108-78-ROV-52
Identification
LATITUDE
LONGITUDE
Remote operated vehicle
ROV
Sample code/label
Sample position
Sample type
Schultz Bank
SponGES
Stjernsund
symbiosis
vulnerable marine ecosystems
Well-known text
Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
topic_facet Accession number
genetics
Agassiz Trawl
AGT
amplicon sequencing
AQUARIUM_C.zetlandica
Area/locality
Campaign
Chloroflexi
Craniella
CTD/Rosette
CTD-RO
DATE/TIME
Deep-sea Sponge Grounds Ecosystems of the North Atlantic
DEPTH
water
Device type
early life stages
Event label
EXP
Experiment
fluorescence in situ hybridisation
G. O. Sars (2003)
GS2017110
GS2017110-15-CTD-05
GS2017110-19-ROV10
GS2018108
GS2018108-17-AGT-01
GS2018108-22-CTD-07
GS2018108-64-ROV-48
GS2018108-66-CTD-16
GS2018108-70-ROV-50
GS2018108-77-CTD-24
GS2018108-78-ROV-52
Identification
LATITUDE
LONGITUDE
Remote operated vehicle
ROV
Sample code/label
Sample position
Sample type
Schultz Bank
SponGES
Stjernsund
symbiosis
vulnerable marine ecosystems
Well-known text
description Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled C. infrequens juveniles and therefore flash-frozen as a whole. Embryos of both sponge species were carefully picked out of the parent sponges with sterile spring steel forceps onboard the research vessel using a stereomicroscope. Ten whole embryos were pooled per adult sponge to account for the small biomass. Data such as presented here provide information on the recruitment of deep-sea sponge holobionts which is needed to develop integrated management tools of such vulnerable marine ecosystems.
format Dataset
author Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
author_facet Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
author_sort Busch, Kathrin
title Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
title_short Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
title_full Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
title_fullStr Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
title_full_unstemmed Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018
title_sort metadata and ncbi-accession numbers of 16s data for seawater and craniella sponges from the north atlantic ocean and an aquarium experiment in 2017 and 2018
publisher PANGAEA
publishDate 2020
url https://doi.pangaea.de/10.1594/PANGAEA.913890
https://doi.org/10.1594/PANGAEA.913890
op_coverage MEDIAN LATITUDE: 72.719640 * MEDIAN LONGITUDE: 12.170438 * SOUTH-BOUND LATITUDE: 70.262200 * WEST-BOUND LONGITUDE: 7.398600 * NORTH-BOUND LATITUDE: 73.836900 * EAST-BOUND LONGITUDE: 22.481400 * DATE/TIME START: 2017-07-27T00:47:52 * DATE/TIME END: 2018-09-19T00:00:00 * MINIMUM DEPTH, water: 217 m * MAXIMUM DEPTH, water: 1070 m
long_lat ENVELOPE(7.398600,22.481400,73.836900,70.262200)
geographic Bergen
Norway
geographic_facet Bergen
Norway
genre North Atlantic
genre_facet North Atlantic
op_relation Busch, Kathrin; Wurz, Erik; Rapp, Hans Tore; Bayer, Kristina; Franke, Andre; Hentschel, Ute (2020): Chloroflexi Dominate the Deep-Sea Golf Ball Sponges Craniella zetlandica and Craniella infrequens Throughout Different Life Stages. Frontiers in Marine Science, 7, https://doi.org/10.3389/fmars.2020.00674
Busch, Kathrin; Wurz, Erik; Rapp, Hans Tore; Bayer, Kristina; Franke, Andre; Hentschel, Ute (2020): In situ footage of a spawning deep-sea golf ball sponge Craniella zetlandica. PANGAEA, https://doi.org/10.1594/PANGAEA.918218
https://doi.pangaea.de/10.1594/PANGAEA.913890
https://doi.org/10.1594/PANGAEA.913890
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.913890
https://doi.org/10.3389/fmars.2020.00674
https://doi.org/10.1594/PANGAEA.918218
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spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.913890 2023-05-15T17:31:16+02:00 Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute MEDIAN LATITUDE: 72.719640 * MEDIAN LONGITUDE: 12.170438 * SOUTH-BOUND LATITUDE: 70.262200 * WEST-BOUND LONGITUDE: 7.398600 * NORTH-BOUND LATITUDE: 73.836900 * EAST-BOUND LONGITUDE: 22.481400 * DATE/TIME START: 2017-07-27T00:47:52 * DATE/TIME END: 2018-09-19T00:00:00 * MINIMUM DEPTH, water: 217 m * MAXIMUM DEPTH, water: 1070 m 2020-03-24 text/tab-separated-values, 441 data points https://doi.pangaea.de/10.1594/PANGAEA.913890 https://doi.org/10.1594/PANGAEA.913890 en eng PANGAEA Busch, Kathrin; Wurz, Erik; Rapp, Hans Tore; Bayer, Kristina; Franke, Andre; Hentschel, Ute (2020): Chloroflexi Dominate the Deep-Sea Golf Ball Sponges Craniella zetlandica and Craniella infrequens Throughout Different Life Stages. Frontiers in Marine Science, 7, https://doi.org/10.3389/fmars.2020.00674 Busch, Kathrin; Wurz, Erik; Rapp, Hans Tore; Bayer, Kristina; Franke, Andre; Hentschel, Ute (2020): In situ footage of a spawning deep-sea golf ball sponge Craniella zetlandica. PANGAEA, https://doi.org/10.1594/PANGAEA.918218 https://doi.pangaea.de/10.1594/PANGAEA.913890 https://doi.org/10.1594/PANGAEA.913890 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Accession number genetics Agassiz Trawl AGT amplicon sequencing AQUARIUM_C.zetlandica Area/locality Campaign Chloroflexi Craniella CTD/Rosette CTD-RO DATE/TIME Deep-sea Sponge Grounds Ecosystems of the North Atlantic DEPTH water Device type early life stages Event label EXP Experiment fluorescence in situ hybridisation G. O. Sars (2003) GS2017110 GS2017110-15-CTD-05 GS2017110-19-ROV10 GS2018108 GS2018108-17-AGT-01 GS2018108-22-CTD-07 GS2018108-64-ROV-48 GS2018108-66-CTD-16 GS2018108-70-ROV-50 GS2018108-77-CTD-24 GS2018108-78-ROV-52 Identification LATITUDE LONGITUDE Remote operated vehicle ROV Sample code/label Sample position Sample type Schultz Bank SponGES Stjernsund symbiosis vulnerable marine ecosystems Well-known text Dataset 2020 ftpangaea https://doi.org/10.1594/PANGAEA.913890 https://doi.org/10.3389/fmars.2020.00674 https://doi.org/10.1594/PANGAEA.918218 2023-01-20T09:13:20Z Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled C. infrequens juveniles and therefore flash-frozen as a whole. Embryos of both sponge species were carefully picked out of the parent sponges with sterile spring steel forceps onboard the research vessel using a stereomicroscope. Ten whole embryos were pooled per adult sponge to account for the small biomass. Data such as presented here provide information on the recruitment of deep-sea sponge holobionts which is needed to develop integrated management tools of such vulnerable marine ecosystems. Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science Bergen Norway ENVELOPE(7.398600,22.481400,73.836900,70.262200)