Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)

Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decrea...

Full description

Bibliographic Details
Main Authors: Li, Futian, Fan, Jiale, Hu, Lili, Beardall, John, Xu, Juntian
Format: Dataset
Language:English
Published: PANGAEA 2019
Subjects:
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.907928
https://doi.org/10.1594/PANGAEA.907928
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.907928
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.907928 2024-09-15T18:28:27+00:00 Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom) Li, Futian Fan, Jiale Hu, Lili Beardall, John Xu, Juntian 2019 text/tab-separated-values, 862 data points https://doi.pangaea.de/10.1594/PANGAEA.907928 https://doi.org/10.1594/PANGAEA.907928 en eng PANGAEA Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.907928 https://doi.org/10.1594/PANGAEA.907928 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsz028 Alkalinity total Aragonite saturation state Bicarbonate ion Biogenic silica per cell Biogenic silica per surface area Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cell biovolume Cell surface area/cell volume ratio Change Chlorophyll a per cell Chromista Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Growth rate Laboratory experiment Laboratory strains Net oxygen evolution Not applicable OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phytoplankton Primary production/Photosynthesis Registration number of species Replicate Respiration Respiration rate oxygen dark per cell Salinity Single species Species Surface area Temperature water Thalassiosira weissflogii dataset 2019 ftpangaea https://doi.org/10.1594/PANGAEA.90792810.1093/icesjms/fsz028 2024-07-24T02:31:34Z Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decreased pCO2 (seawater alkalization) caused by metabolic activities of other photoautotrophs, or after microalgal blooms. Here we grew Thalassiosira weissflogii (diatom) at seven pCO2 levels, including habitat-related lowered levels (25, 50, 100, and 200 µatm) as well as present-day (400 µatm) and elevated (800 and 1600 µatm) levels. Effects of seawater acidification and alkalization on growth, photosynthesis, dark respiration, cell geometry, and biogenic silica content of T. weissflogii were investigated. Elevated pCO2 and associated seawater acidification had no detectable effects. However, the lowered pCO2 levels (25-100 µatm), which might be experienced by coastal diatoms in post-bloom scenarios, significantly limited growth and photosynthesis of this species. In addition, seawater alkalization resulted in more silicified cells with higher dark respiration rates. Thus, a negative correlation of biogenic silica content and growth rate was evident over the pCO2 range tested here. Taken together, seawater alkalization, rather than acidification, could have stronger effects on the ballasting efficiency and carbon export of T. weissflogii. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
Aragonite saturation state
Bicarbonate ion
Biogenic silica
per cell
Biogenic silica per surface area
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Cell surface area/cell volume ratio
Change
Chlorophyll a per cell
Chromista
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Net oxygen evolution
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phytoplankton
Primary production/Photosynthesis
Registration number of species
Replicate
Respiration
Respiration rate
oxygen
dark per cell
Salinity
Single species
Species
Surface area
Temperature
water
Thalassiosira weissflogii
spellingShingle Alkalinity
total
Aragonite saturation state
Bicarbonate ion
Biogenic silica
per cell
Biogenic silica per surface area
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Cell surface area/cell volume ratio
Change
Chlorophyll a per cell
Chromista
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Net oxygen evolution
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phytoplankton
Primary production/Photosynthesis
Registration number of species
Replicate
Respiration
Respiration rate
oxygen
dark per cell
Salinity
Single species
Species
Surface area
Temperature
water
Thalassiosira weissflogii
Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
topic_facet Alkalinity
total
Aragonite saturation state
Bicarbonate ion
Biogenic silica
per cell
Biogenic silica per surface area
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell biovolume
Cell surface area/cell volume ratio
Change
Chlorophyll a per cell
Chromista
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Net oxygen evolution
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Pelagos
pH
Phytoplankton
Primary production/Photosynthesis
Registration number of species
Replicate
Respiration
Respiration rate
oxygen
dark per cell
Salinity
Single species
Species
Surface area
Temperature
water
Thalassiosira weissflogii
description Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decreased pCO2 (seawater alkalization) caused by metabolic activities of other photoautotrophs, or after microalgal blooms. Here we grew Thalassiosira weissflogii (diatom) at seven pCO2 levels, including habitat-related lowered levels (25, 50, 100, and 200 µatm) as well as present-day (400 µatm) and elevated (800 and 1600 µatm) levels. Effects of seawater acidification and alkalization on growth, photosynthesis, dark respiration, cell geometry, and biogenic silica content of T. weissflogii were investigated. Elevated pCO2 and associated seawater acidification had no detectable effects. However, the lowered pCO2 levels (25-100 µatm), which might be experienced by coastal diatoms in post-bloom scenarios, significantly limited growth and photosynthesis of this species. In addition, seawater alkalization resulted in more silicified cells with higher dark respiration rates. Thus, a negative correlation of biogenic silica content and growth rate was evident over the pCO2 range tested here. Taken together, seawater alkalization, rather than acidification, could have stronger effects on the ballasting efficiency and carbon export of T. weissflogii.
format Dataset
author Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
author_facet Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
author_sort Li, Futian
title Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
title_short Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
title_full Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
title_fullStr Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
title_full_unstemmed Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom)
title_sort seawater carbonate chemistry and photosynthesis and dark respiration of thalassiosira weissflogii (diatom)
publisher PANGAEA
publishDate 2019
url https://doi.pangaea.de/10.1594/PANGAEA.907928
https://doi.org/10.1594/PANGAEA.907928
genre Ocean acidification
genre_facet Ocean acidification
op_source Supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science, https://doi.org/10.1093/icesjms/fsz028
op_relation Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.907928
https://doi.org/10.1594/PANGAEA.907928
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.90792810.1093/icesjms/fsz028
_version_ 1810469815039557632