Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99

Absorption coefficients (abs) and optical density (OD) by total particles, phytoplankton and non-algal particles (NAP) were measured with standard deviation (sd) estimated on water samples collected from underway AC-S flow-through system outflow and CTD. Measurements were performed using QFT-ICAM (R...

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Main Authors: Liu, Yangyang, Wiegmann, Sonja, Bracher, Astrid
Format: Other/Unknown Material
Language:English
Published: PANGAEA 2019
Subjects:
AC3
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.907648
https://doi.org/10.1594/PANGAEA.907648
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.907648
record_format openpolar
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic absorption
AC3
Arctic Amplification
FRAM
FRontiers in Arctic marine Monitoring
non-algal particles
optical density
particulate matter
Phytoplankton
spellingShingle absorption
AC3
Arctic Amplification
FRAM
FRontiers in Arctic marine Monitoring
non-algal particles
optical density
particulate matter
Phytoplankton
Liu, Yangyang
Wiegmann, Sonja
Bracher, Astrid
Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
topic_facet absorption
AC3
Arctic Amplification
FRAM
FRontiers in Arctic marine Monitoring
non-algal particles
optical density
particulate matter
Phytoplankton
description Absorption coefficients (abs) and optical density (OD) by total particles, phytoplankton and non-algal particles (NAP) were measured with standard deviation (sd) estimated on water samples collected from underway AC-S flow-through system outflow and CTD. Measurements were performed using QFT-ICAM (Röttgers et al., 2016) as described in Liu et al. (2018) and Liu et al. (2019). 1. About sampling: a) underway samples were collected from unfiltered AC-S outflow (depth: 11m); CTD samples with 5-6 depths were collected on upcast. b) vacuum pressure for filtration: maximum 200 hPa c) samples were measured fresh (not preserved). d) blank filters were collected by soaking them in 0.2um filtered seawater. e) replicates were not collected. 2. About measurements: a) Instrument: light source: UV-VIS lamp (CF-1000- HC lamp, Illumination Technology, USA); absorption meter: Quantitative Filter Technique - Integrating Cavity Absorption Meter (QFT-ICAM) (Röttgers et al., 2016) with 80 mm- diameter integrating sphere; detector: photodiode array spectrometer (AVASPEC-ULS2048-RS-USB2, Avantes, the Netherlands). b) wavelength range of scan and resolution: 313.5-875.7 nm, 0.3 nm. c) slit band width: 2 nm. d) sample filters were bleached with 10% sodium hypochlorite (NaClO) solution for the OD measurement of NAP. e) samples were measured for four times and bleached samples were measured twice. f) dark current and blank filters were measured and subtracted. 3. About data analysis: a) interpolated wavelength range and resolution: 320-844 nm, 2nm. b) wavelength range for fluorescence correction: 670:800 nm. c) diameter of sample patch on GF/F filter: 2.133 cm. d) pathlength amplification factor (beta correction factor): 4.06 (Röttgers et al., 2016). e) no scattering correction for total particle absorption is applied; NAP absorption was adjusted with an offset in the range of 710-750 nm so that the median value of NAP absorption equals the median value of in total particle absorption in this spectral range. This adjustment is based on the ...
format Other/Unknown Material
author Liu, Yangyang
Wiegmann, Sonja
Bracher, Astrid
author_facet Liu, Yangyang
Wiegmann, Sonja
Bracher, Astrid
author_sort Liu, Yangyang
title Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
title_short Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
title_full Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
title_fullStr Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
title_full_unstemmed Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99
title_sort spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during polarstern cruise ps99
publisher PANGAEA
publishDate 2019
url https://doi.pangaea.de/10.1594/PANGAEA.907648
https://doi.org/10.1594/PANGAEA.907648
op_coverage MEDIAN LATITUDE: 73.536611 * MEDIAN LONGITUDE: 5.552432 * SOUTH-BOUND LATITUDE: 56.769550 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 80.002133 * EAST-BOUND LONGITUDE: 18.236670 * DATE/TIME START: 2016-06-14T15:12:00 * DATE/TIME END: 2016-07-13T06:02:00
long_lat ENVELOPE(-5.409330,18.236670,80.002133,56.769550)
genre Arctic
Phytoplankton
genre_facet Arctic
Phytoplankton
op_source Supplement to: Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2019): Retrieval of phytoplankton pigments from underway spectrophotometry in the Fram Strait. Remote Sensing, 11(3), 318, https://doi.org/10.3390/rs11030318
op_relation Liu, Yangyang; Röttgers, Rüdiger; Ramírez-Pérez, Marta; Dinter, Tilman; Steinmetz, Francois; Nöthig, Eva-Maria; Hellmann, Sebastian; Wiegmann, Sonja; Bracher, Astrid (2018): Underway spectrophotometry in the Fram Strait (European Arctic Ocean): a highly resolved chlorophyll a data source for complementing satellite ocean color. Optics Express, 26(14), A678-A696, https://doi.org/10.1364/OE.26.00A678
Neeley, Aimee; Mannino, Antonio; Boss, Emmanuel; D'Sa, Eurico J; Freeman, Scott; Fry, Ed; Mueller, James L; Pegau, Scott; Reynolds, Rick A; Roesler, Collin S; Röttgers, Rüdiger; Stramski, Dariusz; Twardowski, Michael S (2018): Ocean Optics and Biogeochemistry Protocols for Satellite Ocean Colour Sensor Validation; Volume 1.0. Inherent Optical Property Measurements and Protocols: Absorption Coefficient. International Ocean Colour Coordinating Group (IOCCG), https://doi.org/10.25607/OBP-119
Röttgers, Rüdiger; Doxaran, David; Dupouy, Cécile (2016): Quantitative filter technique measurements of spectral light absorption by aquatic particles using a portable integrating cavity absorption meter (QFT-ICAM). Optics Express, 24(2), A1, https://doi.org/10.1364/OE.24.0000A1
https://doi.pangaea.de/10.1594/PANGAEA.907648
https://doi.org/10.1594/PANGAEA.907648
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.90764810.3390/rs1103031810.1364/OE.26.00A67810.25607/OBP-11910.1364/OE.24.0000A1
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spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.907648 2024-09-15T17:51:59+00:00 Spectrophotometric measurements of absorption coefficients and optical density by total particles, phytoplankton and non-algal particles during POLARSTERN cruise PS99 Liu, Yangyang Wiegmann, Sonja Bracher, Astrid MEDIAN LATITUDE: 73.536611 * MEDIAN LONGITUDE: 5.552432 * SOUTH-BOUND LATITUDE: 56.769550 * WEST-BOUND LONGITUDE: -5.409330 * NORTH-BOUND LATITUDE: 80.002133 * EAST-BOUND LONGITUDE: 18.236670 * DATE/TIME START: 2016-06-14T15:12:00 * DATE/TIME END: 2016-07-13T06:02:00 2019 application/zip, 9 datasets https://doi.pangaea.de/10.1594/PANGAEA.907648 https://doi.org/10.1594/PANGAEA.907648 en eng PANGAEA Liu, Yangyang; Röttgers, Rüdiger; Ramírez-Pérez, Marta; Dinter, Tilman; Steinmetz, Francois; Nöthig, Eva-Maria; Hellmann, Sebastian; Wiegmann, Sonja; Bracher, Astrid (2018): Underway spectrophotometry in the Fram Strait (European Arctic Ocean): a highly resolved chlorophyll a data source for complementing satellite ocean color. Optics Express, 26(14), A678-A696, https://doi.org/10.1364/OE.26.00A678 Neeley, Aimee; Mannino, Antonio; Boss, Emmanuel; D'Sa, Eurico J; Freeman, Scott; Fry, Ed; Mueller, James L; Pegau, Scott; Reynolds, Rick A; Roesler, Collin S; Röttgers, Rüdiger; Stramski, Dariusz; Twardowski, Michael S (2018): Ocean Optics and Biogeochemistry Protocols for Satellite Ocean Colour Sensor Validation; Volume 1.0. Inherent Optical Property Measurements and Protocols: Absorption Coefficient. International Ocean Colour Coordinating Group (IOCCG), https://doi.org/10.25607/OBP-119 Röttgers, Rüdiger; Doxaran, David; Dupouy, Cécile (2016): Quantitative filter technique measurements of spectral light absorption by aquatic particles using a portable integrating cavity absorption meter (QFT-ICAM). Optics Express, 24(2), A1, https://doi.org/10.1364/OE.24.0000A1 https://doi.pangaea.de/10.1594/PANGAEA.907648 https://doi.org/10.1594/PANGAEA.907648 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2019): Retrieval of phytoplankton pigments from underway spectrophotometry in the Fram Strait. Remote Sensing, 11(3), 318, https://doi.org/10.3390/rs11030318 absorption AC3 Arctic Amplification FRAM FRontiers in Arctic marine Monitoring non-algal particles optical density particulate matter Phytoplankton dataset publication series 2019 ftpangaea https://doi.org/10.1594/PANGAEA.90764810.3390/rs1103031810.1364/OE.26.00A67810.25607/OBP-11910.1364/OE.24.0000A1 2024-08-06T23:37:39Z Absorption coefficients (abs) and optical density (OD) by total particles, phytoplankton and non-algal particles (NAP) were measured with standard deviation (sd) estimated on water samples collected from underway AC-S flow-through system outflow and CTD. Measurements were performed using QFT-ICAM (Röttgers et al., 2016) as described in Liu et al. (2018) and Liu et al. (2019). 1. About sampling: a) underway samples were collected from unfiltered AC-S outflow (depth: 11m); CTD samples with 5-6 depths were collected on upcast. b) vacuum pressure for filtration: maximum 200 hPa c) samples were measured fresh (not preserved). d) blank filters were collected by soaking them in 0.2um filtered seawater. e) replicates were not collected. 2. About measurements: a) Instrument: light source: UV-VIS lamp (CF-1000- HC lamp, Illumination Technology, USA); absorption meter: Quantitative Filter Technique - Integrating Cavity Absorption Meter (QFT-ICAM) (Röttgers et al., 2016) with 80 mm- diameter integrating sphere; detector: photodiode array spectrometer (AVASPEC-ULS2048-RS-USB2, Avantes, the Netherlands). b) wavelength range of scan and resolution: 313.5-875.7 nm, 0.3 nm. c) slit band width: 2 nm. d) sample filters were bleached with 10% sodium hypochlorite (NaClO) solution for the OD measurement of NAP. e) samples were measured for four times and bleached samples were measured twice. f) dark current and blank filters were measured and subtracted. 3. About data analysis: a) interpolated wavelength range and resolution: 320-844 nm, 2nm. b) wavelength range for fluorescence correction: 670:800 nm. c) diameter of sample patch on GF/F filter: 2.133 cm. d) pathlength amplification factor (beta correction factor): 4.06 (Röttgers et al., 2016). e) no scattering correction for total particle absorption is applied; NAP absorption was adjusted with an offset in the range of 710-750 nm so that the median value of NAP absorption equals the median value of in total particle absorption in this spectral range. This adjustment is based on the ... Other/Unknown Material Arctic Phytoplankton PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-5.409330,18.236670,80.002133,56.769550)