Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus
The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and tr...
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.900202 2023-05-15T17:51:00+02:00 Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus Schunter, Celia Welch, Megan J Nilsson, Göran E Rummer, Jodie L Munday, Philip L Ravasi, Timothy LATITUDE: -18.616670 * LONGITUDE: 146.500000 * DATE/TIME START: 2011-11-01T00:00:00 * DATE/TIME END: 2012-05-31T00:00:00 2018-04-08 text/tab-separated-values, 20862 data points https://doi.pangaea.de/10.1594/PANGAEA.900202 https://doi.org/10.1594/PANGAEA.900202 en eng PANGAEA Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.900202 https://doi.org/10.1594/PANGAEA.900202 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342, https://doi.org/10.1038/s41559-017-0428-8 Acanthochromis polyacanthus Alkalinity total standard deviation Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression Gene expression (incl. proteomics) Gene name Great_Barrier_Reef_OA Laboratory experiment Nekton OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Registration number of species Salinity Single species South Pacific Species Temperature water Dataset 2018 ftpangaea https://doi.org/10.1594/PANGAEA.900202 https://doi.org/10.1038/s41559-017-0428-8 2023-01-20T09:12:16Z The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and transgenerational exposure to elevated CO2, and to test how these responses are influenced by variations in tolerance to elevated CO2 exhibited by the parents. Within-generation responses in gene expression to end-of-century predicted CO2 levels indicate that a self-amplifying cycle in GABAergic neurotransmission is triggered, explaining previously reported neurological and behavioural impairments. Furthermore, epigenetic regulator genes exhibited a within-generation specific response, but with some divergence due to parental phenotype. Importantly, we find that altered gene expression for the majority of within-generation responses returns to baseline levels following parental exposure to elevated CO2 conditions. Our results show that both parental variation in tolerance and cross-generation exposure to elevated CO2 are crucial factors in determining the response of reef fish to changing ocean chemistry. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific ENVELOPE(146.500000,146.500000,-18.616670,-18.616670) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Acanthochromis polyacanthus Alkalinity total standard deviation Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression Gene expression (incl. proteomics) Gene name Great_Barrier_Reef_OA Laboratory experiment Nekton OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Registration number of species Salinity Single species South Pacific Species Temperature water |
spellingShingle |
Acanthochromis polyacanthus Alkalinity total standard deviation Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression Gene expression (incl. proteomics) Gene name Great_Barrier_Reef_OA Laboratory experiment Nekton OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Registration number of species Salinity Single species South Pacific Species Temperature water Schunter, Celia Welch, Megan J Nilsson, Göran E Rummer, Jodie L Munday, Philip L Ravasi, Timothy Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
topic_facet |
Acanthochromis polyacanthus Alkalinity total standard deviation Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression Gene expression (incl. proteomics) Gene name Great_Barrier_Reef_OA Laboratory experiment Nekton OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Registration number of species Salinity Single species South Pacific Species Temperature water |
description |
The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and transgenerational exposure to elevated CO2, and to test how these responses are influenced by variations in tolerance to elevated CO2 exhibited by the parents. Within-generation responses in gene expression to end-of-century predicted CO2 levels indicate that a self-amplifying cycle in GABAergic neurotransmission is triggered, explaining previously reported neurological and behavioural impairments. Furthermore, epigenetic regulator genes exhibited a within-generation specific response, but with some divergence due to parental phenotype. Importantly, we find that altered gene expression for the majority of within-generation responses returns to baseline levels following parental exposure to elevated CO2 conditions. Our results show that both parental variation in tolerance and cross-generation exposure to elevated CO2 are crucial factors in determining the response of reef fish to changing ocean chemistry. |
format |
Dataset |
author |
Schunter, Celia Welch, Megan J Nilsson, Göran E Rummer, Jodie L Munday, Philip L Ravasi, Timothy |
author_facet |
Schunter, Celia Welch, Megan J Nilsson, Göran E Rummer, Jodie L Munday, Philip L Ravasi, Timothy |
author_sort |
Schunter, Celia |
title |
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
title_short |
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
title_full |
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
title_fullStr |
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
title_full_unstemmed |
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus |
title_sort |
seawater carbonate chemistry and gene expression of a reef fish acanthochromis polyacanthus |
publisher |
PANGAEA |
publishDate |
2018 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.900202 https://doi.org/10.1594/PANGAEA.900202 |
op_coverage |
LATITUDE: -18.616670 * LONGITUDE: 146.500000 * DATE/TIME START: 2011-11-01T00:00:00 * DATE/TIME END: 2012-05-31T00:00:00 |
long_lat |
ENVELOPE(146.500000,146.500000,-18.616670,-18.616670) |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_source |
Supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342, https://doi.org/10.1038/s41559-017-0428-8 |
op_relation |
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.900202 https://doi.org/10.1594/PANGAEA.900202 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/PANGAEA.900202 https://doi.org/10.1038/s41559-017-0428-8 |
_version_ |
1766157976291246080 |