Diversity and metabolism of the JTB255 clade in deep-sea sediments

The present study aimed at a first characterization of the enigmatic JTB255 marine benthic group in deep-sea sediments, by: i) confirming the abundance and ubiquitous distribution of JTB255 in deep-sea sediments globally, ii) refining the phylogenetic positioning of the JTB255 clade within the \u03b...

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Main Authors: Hoffmann, Katy, Bienhold, Christina, Buttigieg, Pier Luigi, Laso-Pérez, Rafael, Rapp, Josephine Z, Boetius, Antje, Offre, Pierre
Format: Dataset
Language:English
Published: PANGAEA 2018
Subjects:
Arctic
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.884844
https://doi.org/10.1594/PANGAEA.884844
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.884844
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.884844 2023-05-15T15:02:31+02:00 Diversity and metabolism of the JTB255 clade in deep-sea sediments Hoffmann, Katy Bienhold, Christina Buttigieg, Pier Luigi Laso-Pérez, Rafael Rapp, Josephine Z Boetius, Antje Offre, Pierre MEDIAN LATITUDE: 18.127587 * MEDIAN LONGITUDE: -2.378313 * SOUTH-BOUND LATITUDE: -54.974670 * WEST-BOUND LONGITUDE: -104.266667 * NORTH-BOUND LATITUDE: 88.826750 * EAST-BOUND LONGITUDE: 63.166680 * DATE/TIME START: 2007-01-29T13:17:24 * DATE/TIME END: 2016-07-10T02:23:00 2018-01-12 application/zip, 2 datasets https://doi.pangaea.de/10.1594/PANGAEA.884844 https://doi.org/10.1594/PANGAEA.884844 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.884844 https://doi.org/10.1594/PANGAEA.884844 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Supplement to: Hoffmann, Katy; Bienhold, Christina; Buttigieg, Pier Luigi; Knittel, Katrin; Laso-Pérez, Rafael; Rapp, Josephine Z; Boetius, Antje; Offre, Pierre (2020): Diversity and metabolism of Woeseiales bacteria, global members of marine sediment communities. The ISME Journal, 14(4), 1042-1056, https://doi.org/10.1038/s41396-020-0588-4 Dataset 2018 ftpangaea https://doi.org/10.1594/PANGAEA.884844 https://doi.org/10.1038/s41396-020-0588-4 2023-01-20T07:34:05Z The present study aimed at a first characterization of the enigmatic JTB255 marine benthic group in deep-sea sediments, by: i) confirming the abundance and ubiquitous distribution of JTB255 in deep-sea sediments globally, ii) refining the phylogenetic positioning of the JTB255 clade within the \u03b3-Proteobacteria, iii) distinguishing potential ecotypes within the JTB255 clade, iv) providing first insights into the metabolic potential of deep-sea representatives of this clade. Therefore, two single cell genomes from Arctic HAUSGARTEN deep-se surface sediments were obtained and CARD-FISH counts of total cells, y-Proteobacteria and the JTB255 marine benthic group performed. Dataset Arctic PANGAEA - Data Publisher for Earth & Environmental Science Arctic ENVELOPE(-104.266667,63.166680,88.826750,-54.974670)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
description The present study aimed at a first characterization of the enigmatic JTB255 marine benthic group in deep-sea sediments, by: i) confirming the abundance and ubiquitous distribution of JTB255 in deep-sea sediments globally, ii) refining the phylogenetic positioning of the JTB255 clade within the \u03b3-Proteobacteria, iii) distinguishing potential ecotypes within the JTB255 clade, iv) providing first insights into the metabolic potential of deep-sea representatives of this clade. Therefore, two single cell genomes from Arctic HAUSGARTEN deep-se surface sediments were obtained and CARD-FISH counts of total cells, y-Proteobacteria and the JTB255 marine benthic group performed.
format Dataset
author Hoffmann, Katy
Bienhold, Christina
Buttigieg, Pier Luigi
Laso-Pérez, Rafael
Rapp, Josephine Z
Boetius, Antje
Offre, Pierre
spellingShingle Hoffmann, Katy
Bienhold, Christina
Buttigieg, Pier Luigi
Laso-Pérez, Rafael
Rapp, Josephine Z
Boetius, Antje
Offre, Pierre
Diversity and metabolism of the JTB255 clade in deep-sea sediments
author_facet Hoffmann, Katy
Bienhold, Christina
Buttigieg, Pier Luigi
Laso-Pérez, Rafael
Rapp, Josephine Z
Boetius, Antje
Offre, Pierre
author_sort Hoffmann, Katy
title Diversity and metabolism of the JTB255 clade in deep-sea sediments
title_short Diversity and metabolism of the JTB255 clade in deep-sea sediments
title_full Diversity and metabolism of the JTB255 clade in deep-sea sediments
title_fullStr Diversity and metabolism of the JTB255 clade in deep-sea sediments
title_full_unstemmed Diversity and metabolism of the JTB255 clade in deep-sea sediments
title_sort diversity and metabolism of the jtb255 clade in deep-sea sediments
publisher PANGAEA
publishDate 2018
url https://doi.pangaea.de/10.1594/PANGAEA.884844
https://doi.org/10.1594/PANGAEA.884844
op_coverage MEDIAN LATITUDE: 18.127587 * MEDIAN LONGITUDE: -2.378313 * SOUTH-BOUND LATITUDE: -54.974670 * WEST-BOUND LONGITUDE: -104.266667 * NORTH-BOUND LATITUDE: 88.826750 * EAST-BOUND LONGITUDE: 63.166680 * DATE/TIME START: 2007-01-29T13:17:24 * DATE/TIME END: 2016-07-10T02:23:00
long_lat ENVELOPE(-104.266667,63.166680,88.826750,-54.974670)
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Supplement to: Hoffmann, Katy; Bienhold, Christina; Buttigieg, Pier Luigi; Knittel, Katrin; Laso-Pérez, Rafael; Rapp, Josephine Z; Boetius, Antje; Offre, Pierre (2020): Diversity and metabolism of Woeseiales bacteria, global members of marine sediment communities. The ISME Journal, 14(4), 1042-1056, https://doi.org/10.1038/s41396-020-0588-4
op_relation https://doi.pangaea.de/10.1594/PANGAEA.884844
https://doi.org/10.1594/PANGAEA.884844
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.884844
https://doi.org/10.1038/s41396-020-0588-4
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