Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet

Increasing atmospheric carbon dioxide (CO2) has resulted in a change in seawater chemistry and lowering of pH, referred to as ocean acidification. Understanding how different organisms and processes respond to ocean acidification is vital to predict how marine ecosystems will be altered under future...

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Main Authors: Emerson, Chloe E, Reinardy, Helena C, Bates, Nicolas R, Bodnar, Andrea G
Format: Dataset
Language:English
Published: PANGAEA 2017
Subjects:
EXP
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.878254
https://doi.org/10.1594/PANGAEA.878254
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.878254
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.878254 2024-10-06T13:51:48+00:00 Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet Emerson, Chloe E Reinardy, Helena C Bates, Nicolas R Bodnar, Andrea G LATITUDE: 32.370830 * LONGITUDE: -64.691670 * DATE/TIME START: 2015-07-01T00:00:00 * DATE/TIME END: 2015-07-31T00:00:00 2017 text/tab-separated-values, 7412 data points https://doi.pangaea.de/10.1594/PANGAEA.878254 https://doi.org/10.1594/PANGAEA.878254 en eng PANGAEA Emerson, Chloe E; Reinardy, Helena C; Bates, Nicolas R; Bodnar, Andrea G (2017): Ocean acidification impacts spine integrity but not regenerative capacity of spines and tube feet in adult sea urchins. Royal Society Open Science, 4(5), 170140, https://doi.org/10.1098/rsos.170140 Emerson, Chloe E; Reinardy, Helena C; Bates, Nicolas R; Bodnar, Andrea G (2017): Data from: Ocean acidification impacts spine integrity but not regenerative capacity of spines and tube feet in adult sea urchins [dataset]. Dryad Digital Repository, https://doi.org/10.5061/dryad.f6r10 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.878254 https://doi.org/10.1594/PANGAEA.878254 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard error Animalia Aragonite saturation state Barium/Calcium ratio Behaviour Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Coast and continental shelf Conductivity Containers and aquaria (20-1000 L or < 1 m**2) Echinodermata EXP Experiment Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative dataset 2017 ftpangaea https://doi.org/10.1594/PANGAEA.87825410.1098/rsos.17014010.5061/dryad.f6r10 2024-09-11T00:15:18Z Increasing atmospheric carbon dioxide (CO2) has resulted in a change in seawater chemistry and lowering of pH, referred to as ocean acidification. Understanding how different organisms and processes respond to ocean acidification is vital to predict how marine ecosystems will be altered under future scenarios of continued environmental change. Regenerative processes involving biomineralization in marine calcifiers such as sea urchins are predicted to be especially vulnerable. In this study, the effect of ocean acidification on regeneration of external appendages (spines and tube feet) was investigated in the sea urchin Lytechinus variegatus exposed to ambient (546 µatm), intermediate (1027 µatm) and high (1841 µatm) partial pressure of CO2 (pCO2) for eight weeks. The rate of regeneration was maintained in spines and tube feet throughout two periods of amputation and regrowth under conditions of elevated pCO2. Increased expression of several biomineralization-related genes indicated molecular compensatory mechanisms; however, the structural integrity of both regenerating and homeostatic spines was compromised in high pCO2 conditions. Indicators of physiological fitness (righting response, growth rate, coelomocyte concentration and composition) were not affected by increasing pCO2, but compromised spine integrity is likely to have negative consequences for defence capabilities and therefore survival of these ecologically and economically important organisms. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-64.691670,-64.691670,32.370830,32.370830)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard error
Animalia
Aragonite saturation state
Barium/Calcium ratio
Behaviour
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Coast and continental shelf
Conductivity
Containers and aquaria (20-1000 L or < 1 m**2)
Echinodermata
EXP
Experiment
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
spellingShingle Alkalinity
total
standard error
Animalia
Aragonite saturation state
Barium/Calcium ratio
Behaviour
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Coast and continental shelf
Conductivity
Containers and aquaria (20-1000 L or < 1 m**2)
Echinodermata
EXP
Experiment
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
Emerson, Chloe E
Reinardy, Helena C
Bates, Nicolas R
Bodnar, Andrea G
Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
topic_facet Alkalinity
total
standard error
Animalia
Aragonite saturation state
Barium/Calcium ratio
Behaviour
Benthic animals
Benthos
Bicarbonate ion
Biomass/Abundance/Elemental composition
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Coast and continental shelf
Conductivity
Containers and aquaria (20-1000 L or < 1 m**2)
Echinodermata
EXP
Experiment
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
description Increasing atmospheric carbon dioxide (CO2) has resulted in a change in seawater chemistry and lowering of pH, referred to as ocean acidification. Understanding how different organisms and processes respond to ocean acidification is vital to predict how marine ecosystems will be altered under future scenarios of continued environmental change. Regenerative processes involving biomineralization in marine calcifiers such as sea urchins are predicted to be especially vulnerable. In this study, the effect of ocean acidification on regeneration of external appendages (spines and tube feet) was investigated in the sea urchin Lytechinus variegatus exposed to ambient (546 µatm), intermediate (1027 µatm) and high (1841 µatm) partial pressure of CO2 (pCO2) for eight weeks. The rate of regeneration was maintained in spines and tube feet throughout two periods of amputation and regrowth under conditions of elevated pCO2. Increased expression of several biomineralization-related genes indicated molecular compensatory mechanisms; however, the structural integrity of both regenerating and homeostatic spines was compromised in high pCO2 conditions. Indicators of physiological fitness (righting response, growth rate, coelomocyte concentration and composition) were not affected by increasing pCO2, but compromised spine integrity is likely to have negative consequences for defence capabilities and therefore survival of these ecologically and economically important organisms.
format Dataset
author Emerson, Chloe E
Reinardy, Helena C
Bates, Nicolas R
Bodnar, Andrea G
author_facet Emerson, Chloe E
Reinardy, Helena C
Bates, Nicolas R
Bodnar, Andrea G
author_sort Emerson, Chloe E
title Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
title_short Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
title_full Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
title_fullStr Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
title_full_unstemmed Seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
title_sort seawater carbon chemistry and regenerative capacity of in adult sea urchins spines and tube feet
publisher PANGAEA
publishDate 2017
url https://doi.pangaea.de/10.1594/PANGAEA.878254
https://doi.org/10.1594/PANGAEA.878254
op_coverage LATITUDE: 32.370830 * LONGITUDE: -64.691670 * DATE/TIME START: 2015-07-01T00:00:00 * DATE/TIME END: 2015-07-31T00:00:00
long_lat ENVELOPE(-64.691670,-64.691670,32.370830,32.370830)
genre Ocean acidification
genre_facet Ocean acidification
op_relation Emerson, Chloe E; Reinardy, Helena C; Bates, Nicolas R; Bodnar, Andrea G (2017): Ocean acidification impacts spine integrity but not regenerative capacity of spines and tube feet in adult sea urchins. Royal Society Open Science, 4(5), 170140, https://doi.org/10.1098/rsos.170140
Emerson, Chloe E; Reinardy, Helena C; Bates, Nicolas R; Bodnar, Andrea G (2017): Data from: Ocean acidification impacts spine integrity but not regenerative capacity of spines and tube feet in adult sea urchins [dataset]. Dryad Digital Repository, https://doi.org/10.5061/dryad.f6r10
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.878254
https://doi.org/10.1594/PANGAEA.878254
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.87825410.1098/rsos.17014010.5061/dryad.f6r10
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