A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is contr...
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.867506 2024-09-15T18:24:20+00:00 A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum Sordo, Laura Santos, Rui Reis, Joao Shulika, Alona Silva, João LATITUDE: 37.183510 * LONGITUDE: -8.316680 2016 text/tab-separated-values, 9073 data points https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 en eng PANGAEA Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Sordo, Laura; Santos, Rui; Reis, Joao; Shulika, Alona; Silva, João (2016): A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum. PeerJ, 4, e2503, https://doi.org/10.7717/peerj.2503 Alkalinity total standard error Aragonite saturation state Armacao_de_Pera Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Irradiance Laboratory experiment Macroalgae Net photosynthesis rate oxygen North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phymatolithon lusitanicum Plantae Potentiometric Potentiometric titration Primary production/Photosynthesis Registration number of species Respiration dataset 2016 ftpangaea https://doi.org/10.1594/PANGAEA.86750610.7717/peerj.2503 2024-07-24T02:31:33Z Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is controlled via direct analysis of pCO2 in seawater. This direct type of control accommodates potential temperature and salinity shifts, as the target variable is directly measured instead of being estimated. Water in a header tank is permanently re-circulated through an air-water equilibrator. The equilibrated air is then routed to an infrared gas analyzer (IRGA) that measures pCO2 and conveys this value to a Proportional-Integral-Derivative (PID) controller. The controller commands a solenoid valve that opens and closes the CO2 flush that is bubbled into the header tank. This low-cost control system allows the maintenance of stabilized levels of pCO2 for extended periods of time ensuring accurate experimental conditions. This system was used to study the long term effect of OA on the coralline red algae Phymatolithon lusitanicum. We found that after 11 months of high CO2 exposure, photosynthesis increased with CO2 as opposed to respiration, which was positively affected by temperature. Results showed that this system is adequate to run long-term OA experiments and can be easily adapted to test other relevant variables simultaneously with CO2, such as temperature, irradiance and nutrients. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-8.316680,-8.316680,37.183510,37.183510) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Alkalinity total standard error Aragonite saturation state Armacao_de_Pera Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Irradiance Laboratory experiment Macroalgae Net photosynthesis rate oxygen North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phymatolithon lusitanicum Plantae Potentiometric Potentiometric titration Primary production/Photosynthesis Registration number of species Respiration |
spellingShingle |
Alkalinity total standard error Aragonite saturation state Armacao_de_Pera Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Irradiance Laboratory experiment Macroalgae Net photosynthesis rate oxygen North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phymatolithon lusitanicum Plantae Potentiometric Potentiometric titration Primary production/Photosynthesis Registration number of species Respiration Sordo, Laura Santos, Rui Reis, Joao Shulika, Alona Silva, João A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
topic_facet |
Alkalinity total standard error Aragonite saturation state Armacao_de_Pera Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Irradiance Laboratory experiment Macroalgae Net photosynthesis rate oxygen North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phymatolithon lusitanicum Plantae Potentiometric Potentiometric titration Primary production/Photosynthesis Registration number of species Respiration |
description |
Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is controlled via direct analysis of pCO2 in seawater. This direct type of control accommodates potential temperature and salinity shifts, as the target variable is directly measured instead of being estimated. Water in a header tank is permanently re-circulated through an air-water equilibrator. The equilibrated air is then routed to an infrared gas analyzer (IRGA) that measures pCO2 and conveys this value to a Proportional-Integral-Derivative (PID) controller. The controller commands a solenoid valve that opens and closes the CO2 flush that is bubbled into the header tank. This low-cost control system allows the maintenance of stabilized levels of pCO2 for extended periods of time ensuring accurate experimental conditions. This system was used to study the long term effect of OA on the coralline red algae Phymatolithon lusitanicum. We found that after 11 months of high CO2 exposure, photosynthesis increased with CO2 as opposed to respiration, which was positively affected by temperature. Results showed that this system is adequate to run long-term OA experiments and can be easily adapted to test other relevant variables simultaneously with CO2, such as temperature, irradiance and nutrients. |
format |
Dataset |
author |
Sordo, Laura Santos, Rui Reis, Joao Shulika, Alona Silva, João |
author_facet |
Sordo, Laura Santos, Rui Reis, Joao Shulika, Alona Silva, João |
author_sort |
Sordo, Laura |
title |
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
title_short |
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
title_full |
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
title_fullStr |
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
title_full_unstemmed |
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum |
title_sort |
direct co2 control system for ocean acidification experiments: testing effects on the coralline red algae phymatolithon lusitanicum |
publisher |
PANGAEA |
publishDate |
2016 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 |
op_coverage |
LATITUDE: 37.183510 * LONGITUDE: -8.316680 |
long_lat |
ENVELOPE(-8.316680,-8.316680,37.183510,37.183510) |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_source |
Supplement to: Sordo, Laura; Santos, Rui; Reis, Joao; Shulika, Alona; Silva, João (2016): A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum. PeerJ, 4, e2503, https://doi.org/10.7717/peerj.2503 |
op_relation |
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 |
op_rights |
CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.86750610.7717/peerj.2503 |
_version_ |
1810464668182904832 |