A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum

Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is contr...

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Main Authors: Sordo, Laura, Santos, Rui, Reis, Joao, Shulika, Alona, Silva, João
Format: Dataset
Language:English
Published: PANGAEA 2016
Subjects:
EXP
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.867506
https://doi.org/10.1594/PANGAEA.867506
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.867506
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.867506 2024-09-15T18:24:20+00:00 A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum Sordo, Laura Santos, Rui Reis, Joao Shulika, Alona Silva, João LATITUDE: 37.183510 * LONGITUDE: -8.316680 2016 text/tab-separated-values, 9073 data points https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 en eng PANGAEA Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.867506 https://doi.org/10.1594/PANGAEA.867506 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Sordo, Laura; Santos, Rui; Reis, Joao; Shulika, Alona; Silva, João (2016): A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum. PeerJ, 4, e2503, https://doi.org/10.7717/peerj.2503 Alkalinity total standard error Aragonite saturation state Armacao_de_Pera Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Irradiance Laboratory experiment Macroalgae Net photosynthesis rate oxygen North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phymatolithon lusitanicum Plantae Potentiometric Potentiometric titration Primary production/Photosynthesis Registration number of species Respiration dataset 2016 ftpangaea https://doi.org/10.1594/PANGAEA.86750610.7717/peerj.2503 2024-07-24T02:31:33Z Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is controlled via direct analysis of pCO2 in seawater. This direct type of control accommodates potential temperature and salinity shifts, as the target variable is directly measured instead of being estimated. Water in a header tank is permanently re-circulated through an air-water equilibrator. The equilibrated air is then routed to an infrared gas analyzer (IRGA) that measures pCO2 and conveys this value to a Proportional-Integral-Derivative (PID) controller. The controller commands a solenoid valve that opens and closes the CO2 flush that is bubbled into the header tank. This low-cost control system allows the maintenance of stabilized levels of pCO2 for extended periods of time ensuring accurate experimental conditions. This system was used to study the long term effect of OA on the coralline red algae Phymatolithon lusitanicum. We found that after 11 months of high CO2 exposure, photosynthesis increased with CO2 as opposed to respiration, which was positively affected by temperature. Results showed that this system is adequate to run long-term OA experiments and can be easily adapted to test other relevant variables simultaneously with CO2, such as temperature, irradiance and nutrients. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-8.316680,-8.316680,37.183510,37.183510)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard error
Aragonite saturation state
Armacao_de_Pera
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Irradiance
Laboratory experiment
Macroalgae
Net photosynthesis rate
oxygen
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phymatolithon lusitanicum
Plantae
Potentiometric
Potentiometric titration
Primary production/Photosynthesis
Registration number of species
Respiration
spellingShingle Alkalinity
total
standard error
Aragonite saturation state
Armacao_de_Pera
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Irradiance
Laboratory experiment
Macroalgae
Net photosynthesis rate
oxygen
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phymatolithon lusitanicum
Plantae
Potentiometric
Potentiometric titration
Primary production/Photosynthesis
Registration number of species
Respiration
Sordo, Laura
Santos, Rui
Reis, Joao
Shulika, Alona
Silva, João
A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
topic_facet Alkalinity
total
standard error
Aragonite saturation state
Armacao_de_Pera
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Irradiance
Laboratory experiment
Macroalgae
Net photosynthesis rate
oxygen
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phymatolithon lusitanicum
Plantae
Potentiometric
Potentiometric titration
Primary production/Photosynthesis
Registration number of species
Respiration
description Most ocean acidification (OA) experimental systems rely on pH as an indirect way to control CO2. However, accurate pH measurements are difficult to obtain and shifts in temperature and/or salinity alter the relationship between pH and pCO2. Here we describe a system in which the target pCO2 is controlled via direct analysis of pCO2 in seawater. This direct type of control accommodates potential temperature and salinity shifts, as the target variable is directly measured instead of being estimated. Water in a header tank is permanently re-circulated through an air-water equilibrator. The equilibrated air is then routed to an infrared gas analyzer (IRGA) that measures pCO2 and conveys this value to a Proportional-Integral-Derivative (PID) controller. The controller commands a solenoid valve that opens and closes the CO2 flush that is bubbled into the header tank. This low-cost control system allows the maintenance of stabilized levels of pCO2 for extended periods of time ensuring accurate experimental conditions. This system was used to study the long term effect of OA on the coralline red algae Phymatolithon lusitanicum. We found that after 11 months of high CO2 exposure, photosynthesis increased with CO2 as opposed to respiration, which was positively affected by temperature. Results showed that this system is adequate to run long-term OA experiments and can be easily adapted to test other relevant variables simultaneously with CO2, such as temperature, irradiance and nutrients.
format Dataset
author Sordo, Laura
Santos, Rui
Reis, Joao
Shulika, Alona
Silva, João
author_facet Sordo, Laura
Santos, Rui
Reis, Joao
Shulika, Alona
Silva, João
author_sort Sordo, Laura
title A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
title_short A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
title_full A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
title_fullStr A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
title_full_unstemmed A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum
title_sort direct co2 control system for ocean acidification experiments: testing effects on the coralline red algae phymatolithon lusitanicum
publisher PANGAEA
publishDate 2016
url https://doi.pangaea.de/10.1594/PANGAEA.867506
https://doi.org/10.1594/PANGAEA.867506
op_coverage LATITUDE: 37.183510 * LONGITUDE: -8.316680
long_lat ENVELOPE(-8.316680,-8.316680,37.183510,37.183510)
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_source Supplement to: Sordo, Laura; Santos, Rui; Reis, Joao; Shulika, Alona; Silva, João (2016): A direct CO2 control system for ocean acidification experiments: testing effects on the coralline red algae Phymatolithon lusitanicum. PeerJ, 4, e2503, https://doi.org/10.7717/peerj.2503
op_relation Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.867506
https://doi.org/10.1594/PANGAEA.867506
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.86750610.7717/peerj.2503
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