Metadata und statistic analysis of archaeal and bacterial sequences originating from sediments of the Håkon Mosby mud volcano (all habitats)

• Main Authors: Ruff, S Emil, Ramette, Alban, Boetius, Antje
• Format: Dataset
• Language: English
• Published: PANGAEA 2016
• Subjects: Accession number; genetics; Archaea; operational taxonomic unit; ARK-XIX/3b; ARK-XXIV/2; Bacteria; Chao 1 richness; Deoxyribonucleic acid per volume; DEPTH; sediment/rock; ESONET; European Seafloor Observatory Network; Event label; GC; Gravity corer; Habitat; Håkon Mosby Mud Volcano; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Inverse Simpson index of diversity; LOOME; Maria S. Merian; Methane; Methane oxidation rate; MSM16/2; MSM16/2_809-1; MSM16/2_823-1; MSM16/2_838-1; MSM16/2_847-1; MSM16/2_855-1; MUC; MultiCorer; Multicorer with television; North Atlantic; Norwegian Sea; Polarstern; PS64; PS64/312-1; PS64/317_PUC-17; PS64/326_PUC-12; PS64/332-1; PS64/336-1; PS64/371-1; PS64/372-1; PS64/373-1; PS74; PS74/168-1; PS74/169-1_PUC-3; Bray
• Online Access: https://doi.pangaea.de/10.1594/PANGAEA.861873; https://doi.org/10.1594/PANGAEA.861873

DNA extraction was carried out as described on the MICROBIS project pages (http://icomm.mbl.edu/microbis ) using a commercially available extraction kit. We amplified the hypervariable regions V4-V6 of archaeal and bacterial 16S rRNA genes using PCR and several sets of forward and reverse primers (h...