Community structure of sulfate reducing bacteria in the sediment of the arctic Smeerenburgfjorden

• Main Authors: Ravenschlag, Katrin, Sahm, Kerstin, Knoblauch, Christian, Jørgensen, Bo Barker, Amann, Rudolf I
• Format: Dataset
• Language: English
• Published: PANGAEA 2016
• Subjects: Bacteria; sulfate reducing; targed with EUB338(I-III) oligonucleotide FISH-probe; Core; Date/Time of event; DEPTH; sediment/rock; Desulfobacterium spp.; targeted with 221 oligonucleotides FISH-probe; Desulfobacter spp.; targeted with DSB985 oligonucleotides FISH-probe; Desulfobulbus spp.; targeted with 660 oligonucleotides FISH-probe; Desulforhopalus spp.; targeted with DSR651 oligonucleotides FISH-probe; Desulfotalea spp.; targeted with Sval428 oligonucleotides FISH-probe; Desulfovibrio spp.; targeted with DSV698 oligonucleotides FISH-probe; Desulfuromonas spp.; targeted with DRM432 oligonucleotides FISH-probe; Desulfusarcina/Desulfococcus; targeted with DSS658 oligonucleotide FISH-probe; Epifluorescence microscopy after DAPI staining; Event label; Fluorescence in situ hybridization (FISH); Latitude of event; Longitude of event; Prokaryotes; abundance as single cells; SBF_19980728; Smeerenburgfjorden; Svalbard; Svalbard clone group SVAL1; targeted with DSS225 oligonucleotide FISH-probe; Svalbard clones Sva0081/Sva0863; targeted with cl81-644 oligonucleotide FISH-probe; Arctic; Smeerenburgfjord*
• Online Access: https://doi.pangaea.de/10.1594/PANGAEA.858334; https://doi.org/10.1594/PANGAEA.858334

The community structure of sulfate-reducing bacteria (SRB) of a marine Arctic sediment (Smeerenburgfjorden, Svalbard) was characterized by both fluorescence in situ hybridization (FISH) by using group- and genus-specific 16S rRNA-targeted oligonucleotide probes. Samples stored in PBS-ethanol were di...