(Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3

The planktonic diatom Fragilariopsis kerguelensis plays an important role in the biogeochemical cycles of the Southern Ocean, where remains of its frustules form the largest deposit of biogenic silica anywhere in the world. We assessed the genetic identity of 26 strains, from cells collected at vari...

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Main Authors: Fuchs, Nike, Scalco, Eleonora, Kooistra, W H C F, Assmy, Philipp, Montresor, Marina
Format: Dataset
Language:English
Published: PANGAEA 2013
Subjects:
AWI
HN
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.847739
https://doi.org/10.1594/PANGAEA.847739
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.847739
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.847739 2023-05-15T14:03:05+02:00 (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3 Fuchs, Nike Scalco, Eleonora Kooistra, W H C F Assmy, Philipp Montresor, Marina MEDIAN LATITUDE: -49.619633 * MEDIAN LONGITUDE: 13.192567 * SOUTH-BOUND LATITUDE: -49.735200 * WEST-BOUND LONGITUDE: 2.251500 * NORTH-BOUND LATITUDE: -49.399800 * EAST-BOUND LONGITUDE: 19.001700 * DATE/TIME START: 2004-01-30T22:50:00 * DATE/TIME END: 2004-02-11T18:45:00 * MINIMUM ELEVATION: -4650.0 m * MAXIMUM ELEVATION: -4090.0 m 2013-07-03 text/tab-separated-values, 42 data points https://doi.pangaea.de/10.1594/PANGAEA.847739 https://doi.org/10.1594/PANGAEA.847739 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.847739 https://doi.org/10.1594/PANGAEA.847739 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Supplement to: Fuchs, Nike; Scalco, Eleonora; Kooistra, W H C F; Assmy, Philipp; Montresor, Marina (2013): Genetic characterization and life cycle of the diatom Fragilariopsis kerguelensis. European Journal of Phycology, 48(4), 411-426, https://doi.org/10.1080/09670262.2013.849360 ANT-XXI/3 AWI Cell division rate Cell size Cell size decrease Cell size decrease per division Date/Time of event Event label Hand net HN Latitude of event Longitude of event Polarstern Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas PS65/410-2 PS65/420-4 PS65/424-4 PS65 EIFEX South Atlantic Ocean Species SPP1158 Strain Dataset 2013 ftpangaea https://doi.org/10.1594/PANGAEA.847739 https://doi.org/10.1080/09670262.2013.849360 2023-01-20T09:06:07Z The planktonic diatom Fragilariopsis kerguelensis plays an important role in the biogeochemical cycles of the Southern Ocean, where remains of its frustules form the largest deposit of biogenic silica anywhere in the world. We assessed the genetic identity of 26 strains, from cells collected at various sites in the Southern Ocean, using three molecular markers, LSU and ITS rDNA and rbcL. The LSU sequences were identical among the tested strains, ITS sequences were highly similar, and only one base pair difference was detected among the rbcL sequences. These results, together with a large number of successful mating experiments demonstrated that the strains belong to a single biological species. We investigated the mating system and life cycle traits of F. kerguelensis. Cell size diminished gradually in clonal strains. Gamete formation only occurred when strains of opposite mating type - within a cell size range of 7-36 µm - were mixed together. Two binucleate gametes were formed in each gametangium and gamete conjugation produced a zygote that had four nuclei and was surrounded by thin siliceous scales. Two out of the four nuclei subsequently degenerated and the zygote expanded to form an auxospore surrounded by a transverse and a longitudinal perizonium. Staining with the fluorochrome PDMPO provided for the first time a clear demonstration that the longitudinal perizonium is formed after auxospore expansion is complete. Initial cells produced within the mature auxospores were 78-101 µm in length. Various authors have shown that the average valve size of F. kerguelensis varies in sediment samples collected in regions and seasons with different primary production regimes and this parameter has thus been proposed as a biological proxy for palaeo-productivity. A better understanding of the life cycle of F. kerguelensis should help the design of future investigations aimed at testing the link between cell size distribution in the natural environment and the role that environmental factors might have in the ... Dataset Antarc* Antarctic Arctic Sea ice South Atlantic Ocean Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science Arctic Antarctic Southern Ocean ENVELOPE(2.251500,19.001700,-49.399800,-49.735200)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic ANT-XXI/3
AWI
Cell division rate
Cell size
Cell size decrease
Cell size decrease per division
Date/Time of event
Event label
Hand net
HN
Latitude of event
Longitude of event
Polarstern
Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas
PS65/410-2
PS65/420-4
PS65/424-4
PS65 EIFEX
South Atlantic Ocean
Species
SPP1158
Strain
spellingShingle ANT-XXI/3
AWI
Cell division rate
Cell size
Cell size decrease
Cell size decrease per division
Date/Time of event
Event label
Hand net
HN
Latitude of event
Longitude of event
Polarstern
Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas
PS65/410-2
PS65/420-4
PS65/424-4
PS65 EIFEX
South Atlantic Ocean
Species
SPP1158
Strain
Fuchs, Nike
Scalco, Eleonora
Kooistra, W H C F
Assmy, Philipp
Montresor, Marina
(Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
topic_facet ANT-XXI/3
AWI
Cell division rate
Cell size
Cell size decrease
Cell size decrease per division
Date/Time of event
Event label
Hand net
HN
Latitude of event
Longitude of event
Polarstern
Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas
PS65/410-2
PS65/420-4
PS65/424-4
PS65 EIFEX
South Atlantic Ocean
Species
SPP1158
Strain
description The planktonic diatom Fragilariopsis kerguelensis plays an important role in the biogeochemical cycles of the Southern Ocean, where remains of its frustules form the largest deposit of biogenic silica anywhere in the world. We assessed the genetic identity of 26 strains, from cells collected at various sites in the Southern Ocean, using three molecular markers, LSU and ITS rDNA and rbcL. The LSU sequences were identical among the tested strains, ITS sequences were highly similar, and only one base pair difference was detected among the rbcL sequences. These results, together with a large number of successful mating experiments demonstrated that the strains belong to a single biological species. We investigated the mating system and life cycle traits of F. kerguelensis. Cell size diminished gradually in clonal strains. Gamete formation only occurred when strains of opposite mating type - within a cell size range of 7-36 µm - were mixed together. Two binucleate gametes were formed in each gametangium and gamete conjugation produced a zygote that had four nuclei and was surrounded by thin siliceous scales. Two out of the four nuclei subsequently degenerated and the zygote expanded to form an auxospore surrounded by a transverse and a longitudinal perizonium. Staining with the fluorochrome PDMPO provided for the first time a clear demonstration that the longitudinal perizonium is formed after auxospore expansion is complete. Initial cells produced within the mature auxospores were 78-101 µm in length. Various authors have shown that the average valve size of F. kerguelensis varies in sediment samples collected in regions and seasons with different primary production regimes and this parameter has thus been proposed as a biological proxy for palaeo-productivity. A better understanding of the life cycle of F. kerguelensis should help the design of future investigations aimed at testing the link between cell size distribution in the natural environment and the role that environmental factors might have in the ...
format Dataset
author Fuchs, Nike
Scalco, Eleonora
Kooistra, W H C F
Assmy, Philipp
Montresor, Marina
author_facet Fuchs, Nike
Scalco, Eleonora
Kooistra, W H C F
Assmy, Philipp
Montresor, Marina
author_sort Fuchs, Nike
title (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
title_short (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
title_full (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
title_fullStr (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
title_full_unstemmed (Table 2) Rate of reduction in cell size (apical length) and growth rate for seven Fragilariopsis kerguelensis strains sampled during POLARSTERN cruise ANT-XXI/3
title_sort (table 2) rate of reduction in cell size (apical length) and growth rate for seven fragilariopsis kerguelensis strains sampled during polarstern cruise ant-xxi/3
publisher PANGAEA
publishDate 2013
url https://doi.pangaea.de/10.1594/PANGAEA.847739
https://doi.org/10.1594/PANGAEA.847739
op_coverage MEDIAN LATITUDE: -49.619633 * MEDIAN LONGITUDE: 13.192567 * SOUTH-BOUND LATITUDE: -49.735200 * WEST-BOUND LONGITUDE: 2.251500 * NORTH-BOUND LATITUDE: -49.399800 * EAST-BOUND LONGITUDE: 19.001700 * DATE/TIME START: 2004-01-30T22:50:00 * DATE/TIME END: 2004-02-11T18:45:00 * MINIMUM ELEVATION: -4650.0 m * MAXIMUM ELEVATION: -4090.0 m
long_lat ENVELOPE(2.251500,19.001700,-49.399800,-49.735200)
geographic Arctic
Antarctic
Southern Ocean
geographic_facet Arctic
Antarctic
Southern Ocean
genre Antarc*
Antarctic
Arctic
Sea ice
South Atlantic Ocean
Southern Ocean
genre_facet Antarc*
Antarctic
Arctic
Sea ice
South Atlantic Ocean
Southern Ocean
op_source Supplement to: Fuchs, Nike; Scalco, Eleonora; Kooistra, W H C F; Assmy, Philipp; Montresor, Marina (2013): Genetic characterization and life cycle of the diatom Fragilariopsis kerguelensis. European Journal of Phycology, 48(4), 411-426, https://doi.org/10.1080/09670262.2013.849360
op_relation https://doi.pangaea.de/10.1594/PANGAEA.847739
https://doi.org/10.1594/PANGAEA.847739
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.847739
https://doi.org/10.1080/09670262.2013.849360
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