Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes

Corals play a key role in ocean ecosystems and carbonate balance, but their molecular response to ocean acidification remains unclear. The only previous whole-transcriptome study documented extensive disruption of gene expression, particularly of genes encoding skeletal organic matrix proteins, in j...

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Main Authors: Moya, Aurélie, Huisman, L, Forêt, S, Gattuso, Jean-Pierre, Hayward, D C, Ball, E E, Miller, David J
Format: Dataset
Language:English
Published: PANGAEA 2015
Subjects:
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.847720
https://doi.org/10.1594/PANGAEA.847720
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.847720
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.847720 2023-05-15T17:51:12+02:00 Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes Moya, Aurélie Huisman, L Forêt, S Gattuso, Jean-Pierre Hayward, D C Ball, E E Miller, David J 2015-07-03 text/tab-separated-values, 568 data points https://doi.pangaea.de/10.1594/PANGAEA.847720 https://doi.org/10.1594/PANGAEA.847720 en eng PANGAEA Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.847720 https://doi.org/10.1594/PANGAEA.847720 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Supplement to: Moya, Aurélie; Huisman, L; Forêt, S; Gattuso, Jean-Pierre; Hayward, D C; Ball, E E; Miller, David J (2015): Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes. Molecular Ecology, 24(2), 438-452, https://doi.org/10.1111/mec.13021 Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Family Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene abundance Gene expression (incl. proteomics) Group Laboratory experiment Number of sequences OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Percentage pH Potentiometric Salinity Single species South Pacific Species Temperature water Dataset 2015 ftpangaea https://doi.org/10.1594/PANGAEA.847720 https://doi.org/10.1111/mec.13021 2023-01-20T09:06:07Z Corals play a key role in ocean ecosystems and carbonate balance, but their molecular response to ocean acidification remains unclear. The only previous whole-transcriptome study documented extensive disruption of gene expression, particularly of genes encoding skeletal organic matrix proteins, in juvenile corals (Acropora millepora) after short-term (3 d) exposure to elevated pCO2. In this study, whole-transcriptome analysis was used to compare the effects of such 'acute' (3 d) exposure to elevated pCO2 with a longer ('prolonged'; 9 d) period of exposure beginning immediately post-fertilization. Far fewer genes were differentially expressed under the 9-d treatment, and although the transcriptome data implied wholesale disruption of metabolism and calcification genes in the acute treatment experiment, expression of most genes was at control levels after prolonged treatment. There was little overlap between the genes responding to the acute and prolonged treatments, but heat shock proteins (HSPs) and heat shock factors (HSFs) were over-represented amongst the genes responding to both treatments. Amongst these was an HSP70 gene previously shown to be involved in acclimation to thermal stress in a field population of another acroporid coral. The most obvious feature of the molecular response in the 9-d treatment experiment was the upregulation of five distinct Bcl-2 family members, the majority predicted to be anti-apoptotic. This suggests that an important component of the longer term response to elevated CO2 is suppression of apoptosis. It therefore appears that juvenile A. millepora have the capacity to rapidly acclimate to elevated pCO2, a process mediated by upregulation of specific HSPs and a suite of Bcl-2 family members. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Family
Figure
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene abundance
Gene expression (incl. proteomics)
Group
Laboratory experiment
Number of sequences
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Percentage
pH
Potentiometric
Salinity
Single species
South Pacific
Species
Temperature
water
spellingShingle Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Family
Figure
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene abundance
Gene expression (incl. proteomics)
Group
Laboratory experiment
Number of sequences
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Percentage
pH
Potentiometric
Salinity
Single species
South Pacific
Species
Temperature
water
Moya, Aurélie
Huisman, L
Forêt, S
Gattuso, Jean-Pierre
Hayward, D C
Ball, E E
Miller, David J
Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
topic_facet Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Family
Figure
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene abundance
Gene expression (incl. proteomics)
Group
Laboratory experiment
Number of sequences
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Percentage
pH
Potentiometric
Salinity
Single species
South Pacific
Species
Temperature
water
description Corals play a key role in ocean ecosystems and carbonate balance, but their molecular response to ocean acidification remains unclear. The only previous whole-transcriptome study documented extensive disruption of gene expression, particularly of genes encoding skeletal organic matrix proteins, in juvenile corals (Acropora millepora) after short-term (3 d) exposure to elevated pCO2. In this study, whole-transcriptome analysis was used to compare the effects of such 'acute' (3 d) exposure to elevated pCO2 with a longer ('prolonged'; 9 d) period of exposure beginning immediately post-fertilization. Far fewer genes were differentially expressed under the 9-d treatment, and although the transcriptome data implied wholesale disruption of metabolism and calcification genes in the acute treatment experiment, expression of most genes was at control levels after prolonged treatment. There was little overlap between the genes responding to the acute and prolonged treatments, but heat shock proteins (HSPs) and heat shock factors (HSFs) were over-represented amongst the genes responding to both treatments. Amongst these was an HSP70 gene previously shown to be involved in acclimation to thermal stress in a field population of another acroporid coral. The most obvious feature of the molecular response in the 9-d treatment experiment was the upregulation of five distinct Bcl-2 family members, the majority predicted to be anti-apoptotic. This suggests that an important component of the longer term response to elevated CO2 is suppression of apoptosis. It therefore appears that juvenile A. millepora have the capacity to rapidly acclimate to elevated pCO2, a process mediated by upregulation of specific HSPs and a suite of Bcl-2 family members.
format Dataset
author Moya, Aurélie
Huisman, L
Forêt, S
Gattuso, Jean-Pierre
Hayward, D C
Ball, E E
Miller, David J
author_facet Moya, Aurélie
Huisman, L
Forêt, S
Gattuso, Jean-Pierre
Hayward, D C
Ball, E E
Miller, David J
author_sort Moya, Aurélie
title Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
title_short Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
title_full Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
title_fullStr Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
title_full_unstemmed Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes
title_sort rapid acclimation of juvenile corals to co2-mediated acidification by upregulation of heat shock protein and bcl-2 genes
publisher PANGAEA
publishDate 2015
url https://doi.pangaea.de/10.1594/PANGAEA.847720
https://doi.org/10.1594/PANGAEA.847720
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_source Supplement to: Moya, Aurélie; Huisman, L; Forêt, S; Gattuso, Jean-Pierre; Hayward, D C; Ball, E E; Miller, David J (2015): Rapid acclimation of juvenile corals to CO2-mediated acidification by upregulation of heat shock protein and Bcl-2 genes. Molecular Ecology, 24(2), 438-452, https://doi.org/10.1111/mec.13021
op_relation Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.847720
https://doi.org/10.1594/PANGAEA.847720
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.847720
https://doi.org/10.1111/mec.13021
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