Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH

Macrocystis pyrifera is a widely distributed, highly productive, seaweed. It is known to use bicarbonate (HCO3-) from seawater in photosynthesis and the main mechanism of utilization is attributed to the external catalyzed dehydration of HCO3- by the surface-bound enzyme carbonic anhydrase (CAext)....

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Main Authors: Fernández, Pamela A, Hurd, Catriona L, Roleda, Michael Y
Format: Dataset
Language:English
Published: PANGAEA 2014
Subjects:
EXP
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.839919
https://doi.org/10.1594/PANGAEA.839919
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.839919
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.839919 2024-09-15T18:28:10+00:00 Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH Fernández, Pamela A Hurd, Catriona L Roleda, Michael Y LATITUDE: -45.783330 * LONGITUDE: 170.716670 * DATE/TIME START: 2013-02-01T00:00:00 * DATE/TIME END: 2013-02-28T00:00:00 2014 text/tab-separated-values, 465 data points https://doi.pangaea.de/10.1594/PANGAEA.839919 https://doi.org/10.1594/PANGAEA.839919 en eng PANGAEA Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0 [webpage]. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.839919 https://doi.org/10.1594/PANGAEA.839919 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Fernández, Pamela A; Hurd, Catriona L; Roleda, Michael Y (2014): Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH. Journal of Phycology, 50(6), 998-1008, https://doi.org/10.1111/jpy.12247 Alkalinity total Aragonite saturation state Aromoana Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using SWCO2 (Hunter 2007) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Carbonic anhydrase activity standard error Chromista Coast and continental shelf Coulometric titration EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Inhibition of net photosynthesis Laboratory experiment Macroalgae Macrocystis pyrifera Net photosynthesis rate oxygen OA-ICC Ocean Acidification International Coordination Centre Ochrophyta Other metabolic rates Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Potentiometric titration Primary production/Photosynthesis Salinity Single species South Pacific Species Spectrophotometric dataset 2014 ftpangaea https://doi.org/10.1594/PANGAEA.83991910.1111/jpy.12247 2024-07-24T02:31:33Z Macrocystis pyrifera is a widely distributed, highly productive, seaweed. It is known to use bicarbonate (HCO3-) from seawater in photosynthesis and the main mechanism of utilization is attributed to the external catalyzed dehydration of HCO3- by the surface-bound enzyme carbonic anhydrase (CAext). Here, we examined other putative HCO3- uptake mechanisms in M. pyrifera under pHT 9.00 (HCO3-: CO2 = 940:1) and pHT 7.65 (HCO3-: CO2 = 51:1). Rates of photosynthesis, and internal CA (CAint) and CAext activity were measured following the application of AZ which inhibits CAext, and DIDS which inhibits a different HCO3- uptake system, via an anion exchange (AE) protein. We found that the main mechanism of HCO3- uptake by M. pyrifera is via an AE protein, regardless of the HCO3-: CO2 ratio, with CAext making little contribution. Inhibiting the AE protein led to a 55%-65% decrease in photosynthetic rates. Inhibiting both the AE protein and CAext at pHT 9.00 led to 80%-100% inhibition of photosynthesis, whereas at pHT 7.65, passive CO2 diffusion supported 33% of photosynthesis. CAint was active at pHT 7.65 and 9.00, and activity was always higher than CAext, because of its role in dehydrating HCO3- to supply CO2 to RuBisCO. Interestingly, the main mechanism of HCO3- uptake in M. pyrifera was different than that in other Laminariales studied (CAext-catalyzed reaction) and we suggest that species-specific knowledge of carbon uptake mechanisms is required in order to elucidate how seaweeds might respond to future changes in HCO3-:CO2 due to ocean acidification. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(170.716670,170.716670,-45.783330,-45.783330)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
Aragonite saturation state
Aromoana
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using SWCO2 (Hunter
2007)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbonic anhydrase activity
standard error
Chromista
Coast and continental shelf
Coulometric titration
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Inhibition of net photosynthesis
Laboratory experiment
Macroalgae
Macrocystis pyrifera
Net photosynthesis rate
oxygen
OA-ICC
Ocean Acidification International Coordination Centre
Ochrophyta
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Potentiometric titration
Primary production/Photosynthesis
Salinity
Single species
South Pacific
Species
Spectrophotometric
spellingShingle Alkalinity
total
Aragonite saturation state
Aromoana
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using SWCO2 (Hunter
2007)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbonic anhydrase activity
standard error
Chromista
Coast and continental shelf
Coulometric titration
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Inhibition of net photosynthesis
Laboratory experiment
Macroalgae
Macrocystis pyrifera
Net photosynthesis rate
oxygen
OA-ICC
Ocean Acidification International Coordination Centre
Ochrophyta
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Potentiometric titration
Primary production/Photosynthesis
Salinity
Single species
South Pacific
Species
Spectrophotometric
Fernández, Pamela A
Hurd, Catriona L
Roleda, Michael Y
Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
topic_facet Alkalinity
total
Aragonite saturation state
Aromoana
Benthos
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using SWCO2 (Hunter
2007)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbonic anhydrase activity
standard error
Chromista
Coast and continental shelf
Coulometric titration
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Inhibition of net photosynthesis
Laboratory experiment
Macroalgae
Macrocystis pyrifera
Net photosynthesis rate
oxygen
OA-ICC
Ocean Acidification International Coordination Centre
Ochrophyta
Other metabolic rates
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Potentiometric titration
Primary production/Photosynthesis
Salinity
Single species
South Pacific
Species
Spectrophotometric
description Macrocystis pyrifera is a widely distributed, highly productive, seaweed. It is known to use bicarbonate (HCO3-) from seawater in photosynthesis and the main mechanism of utilization is attributed to the external catalyzed dehydration of HCO3- by the surface-bound enzyme carbonic anhydrase (CAext). Here, we examined other putative HCO3- uptake mechanisms in M. pyrifera under pHT 9.00 (HCO3-: CO2 = 940:1) and pHT 7.65 (HCO3-: CO2 = 51:1). Rates of photosynthesis, and internal CA (CAint) and CAext activity were measured following the application of AZ which inhibits CAext, and DIDS which inhibits a different HCO3- uptake system, via an anion exchange (AE) protein. We found that the main mechanism of HCO3- uptake by M. pyrifera is via an AE protein, regardless of the HCO3-: CO2 ratio, with CAext making little contribution. Inhibiting the AE protein led to a 55%-65% decrease in photosynthetic rates. Inhibiting both the AE protein and CAext at pHT 9.00 led to 80%-100% inhibition of photosynthesis, whereas at pHT 7.65, passive CO2 diffusion supported 33% of photosynthesis. CAint was active at pHT 7.65 and 9.00, and activity was always higher than CAext, because of its role in dehydrating HCO3- to supply CO2 to RuBisCO. Interestingly, the main mechanism of HCO3- uptake in M. pyrifera was different than that in other Laminariales studied (CAext-catalyzed reaction) and we suggest that species-specific knowledge of carbon uptake mechanisms is required in order to elucidate how seaweeds might respond to future changes in HCO3-:CO2 due to ocean acidification.
format Dataset
author Fernández, Pamela A
Hurd, Catriona L
Roleda, Michael Y
author_facet Fernández, Pamela A
Hurd, Catriona L
Roleda, Michael Y
author_sort Fernández, Pamela A
title Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
title_short Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
title_full Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
title_fullStr Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
title_full_unstemmed Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH
title_sort bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp macrocystis pyrifera (laminariales, phaeophyceae) under variable ph
publisher PANGAEA
publishDate 2014
url https://doi.pangaea.de/10.1594/PANGAEA.839919
https://doi.org/10.1594/PANGAEA.839919
op_coverage LATITUDE: -45.783330 * LONGITUDE: 170.716670 * DATE/TIME START: 2013-02-01T00:00:00 * DATE/TIME END: 2013-02-28T00:00:00
long_lat ENVELOPE(170.716670,170.716670,-45.783330,-45.783330)
genre Ocean acidification
genre_facet Ocean acidification
op_source Supplement to: Fernández, Pamela A; Hurd, Catriona L; Roleda, Michael Y (2014): Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH. Journal of Phycology, 50(6), 998-1008, https://doi.org/10.1111/jpy.12247
op_relation Lavigne, Héloïse; Epitalon, Jean-Marie; Gattuso, Jean-Pierre (2014): seacarb: seawater carbonate chemistry with R. R package version 3.0 [webpage]. https://cran.r-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.839919
https://doi.org/10.1594/PANGAEA.839919
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.83991910.1111/jpy.12247
_version_ 1810469505173815296