Expression of biomineralization-related ion transport genes in Emiliania huxleyi

Biomineralization in the marine phytoplankton Emiliania huxleyi is a stringently controlled intracellular process. The molecular basis of coccolith production is still relatively unknown although its importance in global biogeochemical cycles and varying sensitivity to increased pCO2 levels has been...

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Main Authors: Mackinder, Luke C M, Wheeler, Glen, Schroeder, Declan C, von Dassow, Peter, Riebesell, Ulf, Brownlee, Colin
Format: Dataset
Language:English
Published: PANGAEA 2011
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.832450
https://doi.org/10.1594/PANGAEA.832450
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.832450
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.832450 2023-05-15T17:51:18+02:00 Expression of biomineralization-related ion transport genes in Emiliania huxleyi Mackinder, Luke C M Wheeler, Glen Schroeder, Declan C von Dassow, Peter Riebesell, Ulf Brownlee, Colin 2011-05-12 application/zip, 3 datasets https://doi.pangaea.de/10.1594/PANGAEA.832450 https://doi.org/10.1594/PANGAEA.832450 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.832450 https://doi.org/10.1594/PANGAEA.832450 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Supplement to: Mackinder, Luke C M; Wheeler, Glen; Schroeder, Declan C; von Dassow, Peter; Riebesell, Ulf; Brownlee, Colin (2011): Expression of biomineralization-related ion transport genes in Emiliania huxleyi. Environmental Microbiology, 13(12), 3250-3265, https://doi.org/10.1111/j.1462-2920.2011.02561.x BIOACID Biological Impacts of Ocean Acidification Dataset 2011 ftpangaea https://doi.org/10.1594/PANGAEA.832450 https://doi.org/10.1111/j.1462-2920.2011.02561.x 2023-01-20T07:33:17Z Biomineralization in the marine phytoplankton Emiliania huxleyi is a stringently controlled intracellular process. The molecular basis of coccolith production is still relatively unknown although its importance in global biogeochemical cycles and varying sensitivity to increased pCO2 levels has been well documented. This study looks into the role of several candidate Ca2+, H+ and inorganic carbon transport genes in E. huxleyi, using quantitative reverse transcriptase PCR. Differential gene expression analysis was investigated in two isogenic pairs of calcifying and non-calcifying strains of E. huxleyi and cultures grown at various Ca2+ concentrations to alter calcite production. We show that calcification correlated to the consistent upregulation of a putative HCO3- transporter belonging to the solute carrier 4 (SLC4) family, a Ca2+/H+ exchanger belonging to the CAX family of exchangers and a vacuolar H+-ATPase. We also show that the coccolith-associated protein, GPA is downregulated in calcifying cells. The data provide strong evidence that these genes play key roles in E. huxleyi biomineralization. Based on the gene expression data and the current literature a working model for biomineralization-related ion transport in coccolithophores is presented. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic BIOACID
Biological Impacts of Ocean Acidification
spellingShingle BIOACID
Biological Impacts of Ocean Acidification
Mackinder, Luke C M
Wheeler, Glen
Schroeder, Declan C
von Dassow, Peter
Riebesell, Ulf
Brownlee, Colin
Expression of biomineralization-related ion transport genes in Emiliania huxleyi
topic_facet BIOACID
Biological Impacts of Ocean Acidification
description Biomineralization in the marine phytoplankton Emiliania huxleyi is a stringently controlled intracellular process. The molecular basis of coccolith production is still relatively unknown although its importance in global biogeochemical cycles and varying sensitivity to increased pCO2 levels has been well documented. This study looks into the role of several candidate Ca2+, H+ and inorganic carbon transport genes in E. huxleyi, using quantitative reverse transcriptase PCR. Differential gene expression analysis was investigated in two isogenic pairs of calcifying and non-calcifying strains of E. huxleyi and cultures grown at various Ca2+ concentrations to alter calcite production. We show that calcification correlated to the consistent upregulation of a putative HCO3- transporter belonging to the solute carrier 4 (SLC4) family, a Ca2+/H+ exchanger belonging to the CAX family of exchangers and a vacuolar H+-ATPase. We also show that the coccolith-associated protein, GPA is downregulated in calcifying cells. The data provide strong evidence that these genes play key roles in E. huxleyi biomineralization. Based on the gene expression data and the current literature a working model for biomineralization-related ion transport in coccolithophores is presented.
format Dataset
author Mackinder, Luke C M
Wheeler, Glen
Schroeder, Declan C
von Dassow, Peter
Riebesell, Ulf
Brownlee, Colin
author_facet Mackinder, Luke C M
Wheeler, Glen
Schroeder, Declan C
von Dassow, Peter
Riebesell, Ulf
Brownlee, Colin
author_sort Mackinder, Luke C M
title Expression of biomineralization-related ion transport genes in Emiliania huxleyi
title_short Expression of biomineralization-related ion transport genes in Emiliania huxleyi
title_full Expression of biomineralization-related ion transport genes in Emiliania huxleyi
title_fullStr Expression of biomineralization-related ion transport genes in Emiliania huxleyi
title_full_unstemmed Expression of biomineralization-related ion transport genes in Emiliania huxleyi
title_sort expression of biomineralization-related ion transport genes in emiliania huxleyi
publisher PANGAEA
publishDate 2011
url https://doi.pangaea.de/10.1594/PANGAEA.832450
https://doi.org/10.1594/PANGAEA.832450
genre Ocean acidification
genre_facet Ocean acidification
op_source Supplement to: Mackinder, Luke C M; Wheeler, Glen; Schroeder, Declan C; von Dassow, Peter; Riebesell, Ulf; Brownlee, Colin (2011): Expression of biomineralization-related ion transport genes in Emiliania huxleyi. Environmental Microbiology, 13(12), 3250-3265, https://doi.org/10.1111/j.1462-2920.2011.02561.x
op_relation https://doi.pangaea.de/10.1594/PANGAEA.832450
https://doi.org/10.1594/PANGAEA.832450
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/PANGAEA.832450
https://doi.org/10.1111/j.1462-2920.2011.02561.x
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