Major cellular and physiological impacts of ocean acidification on a reef building coral
As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbon...
Main Authors: | , , , , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2012
|
Subjects: | |
Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 |
id |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.831180 |
---|---|
record_format |
openpolar |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.831180 2024-09-15T18:27:55+00:00 Major cellular and physiological impacts of ocean acidification on a reef building coral Kaniewska, Paulina Campbell, Paul R Kline, David I Rodriguez-Lanetty, Mauricio Miller, David J Dove, Sophie Hoegh-Guldberg, Ove MEDIAN LATITUDE: -23.440735 * MEDIAN LONGITUDE: 151.911889 * SOUTH-BOUND LATITUDE: -23.449153 * WEST-BOUND LONGITUDE: 151.898827 * NORTH-BOUND LATITUDE: -23.432317 * EAST-BOUND LONGITUDE: 151.924951 2012 text/tab-separated-values, 19866 data points https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 en eng PANGAEA Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4 [webpage]. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Kaniewska, Paulina; Campbell, Paul R; Kline, David I; Rodriguez-Lanetty, Mauricio; Miller, David J; Dove, Sophie; Hoegh-Guldberg, Ove (2012): Major Cellular and Physiological Impacts of Ocean Acidification on a Reef Building Coral. PLoS ONE, 7(4), e34659, https://doi.org/10.1371/journal.pone.0034659.s005 Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcification/Dissolution Calcification rate Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative Gene expression (incl. proteomics) Gene name Heron_Reef Heron Reef Great Barrier Reef Queensland Identification Incubation duration Laboratory experiment OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Photosynthetic capacity oxygen production per cell Primary production/Photosynthesis dataset 2012 ftpangaea https://doi.org/10.1594/PANGAEA.83118010.1371/journal.pone.0034659.s005 2024-07-24T02:31:32Z As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbonate ion concentrations. Here, through the use of physiology measurements and cDNA microarrays, we show that changes in pH and ocean chemistry consistent with two scenarios put forward by the Intergovernmental Panel on Climate Change (IPCC) drive major changes in gene expression, respiration, photosynthesis and symbiosis of the coral, Acropora millepora, before affects on biomineralisation are apparent at the phenotype level. Under high CO2 conditions corals at the phenotype level lost over half their Symbiodinium populations, and had a decrease in both photosynthesis and respiration. Changes in gene expression were consistent with metabolic suppression, an increase in oxidative stress, apoptosis and symbiont loss. Other expression patterns demonstrate upregulation of membrane transporters, as well as the regulation of genes involved in membrane cytoskeletal interactions and cytoskeletal remodeling. These widespread changes in gene expression emphasize the need to expand future studies of ocean acidification to include a wider spectrum of cellular processes, many of which may occur before impacts on calcification. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(151.898827,151.924951,-23.432317,-23.449153) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcification/Dissolution Calcification rate Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative Gene expression (incl. proteomics) Gene name Heron_Reef Heron Reef Great Barrier Reef Queensland Identification Incubation duration Laboratory experiment OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Photosynthetic capacity oxygen production per cell Primary production/Photosynthesis |
spellingShingle |
Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcification/Dissolution Calcification rate Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative Gene expression (incl. proteomics) Gene name Heron_Reef Heron Reef Great Barrier Reef Queensland Identification Incubation duration Laboratory experiment OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Photosynthetic capacity oxygen production per cell Primary production/Photosynthesis Kaniewska, Paulina Campbell, Paul R Kline, David I Rodriguez-Lanetty, Mauricio Miller, David J Dove, Sophie Hoegh-Guldberg, Ove Major cellular and physiological impacts of ocean acidification on a reef building coral |
topic_facet |
Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcification/Dissolution Calcification rate Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative Gene expression (incl. proteomics) Gene name Heron_Reef Heron Reef Great Barrier Reef Queensland Identification Incubation duration Laboratory experiment OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Photosynthetic capacity oxygen production per cell Primary production/Photosynthesis |
description |
As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbonate ion concentrations. Here, through the use of physiology measurements and cDNA microarrays, we show that changes in pH and ocean chemistry consistent with two scenarios put forward by the Intergovernmental Panel on Climate Change (IPCC) drive major changes in gene expression, respiration, photosynthesis and symbiosis of the coral, Acropora millepora, before affects on biomineralisation are apparent at the phenotype level. Under high CO2 conditions corals at the phenotype level lost over half their Symbiodinium populations, and had a decrease in both photosynthesis and respiration. Changes in gene expression were consistent with metabolic suppression, an increase in oxidative stress, apoptosis and symbiont loss. Other expression patterns demonstrate upregulation of membrane transporters, as well as the regulation of genes involved in membrane cytoskeletal interactions and cytoskeletal remodeling. These widespread changes in gene expression emphasize the need to expand future studies of ocean acidification to include a wider spectrum of cellular processes, many of which may occur before impacts on calcification. |
format |
Dataset |
author |
Kaniewska, Paulina Campbell, Paul R Kline, David I Rodriguez-Lanetty, Mauricio Miller, David J Dove, Sophie Hoegh-Guldberg, Ove |
author_facet |
Kaniewska, Paulina Campbell, Paul R Kline, David I Rodriguez-Lanetty, Mauricio Miller, David J Dove, Sophie Hoegh-Guldberg, Ove |
author_sort |
Kaniewska, Paulina |
title |
Major cellular and physiological impacts of ocean acidification on a reef building coral |
title_short |
Major cellular and physiological impacts of ocean acidification on a reef building coral |
title_full |
Major cellular and physiological impacts of ocean acidification on a reef building coral |
title_fullStr |
Major cellular and physiological impacts of ocean acidification on a reef building coral |
title_full_unstemmed |
Major cellular and physiological impacts of ocean acidification on a reef building coral |
title_sort |
major cellular and physiological impacts of ocean acidification on a reef building coral |
publisher |
PANGAEA |
publishDate |
2012 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 |
op_coverage |
MEDIAN LATITUDE: -23.440735 * MEDIAN LONGITUDE: 151.911889 * SOUTH-BOUND LATITUDE: -23.449153 * WEST-BOUND LONGITUDE: 151.898827 * NORTH-BOUND LATITUDE: -23.432317 * EAST-BOUND LONGITUDE: 151.924951 |
long_lat |
ENVELOPE(151.898827,151.924951,-23.432317,-23.449153) |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_source |
Supplement to: Kaniewska, Paulina; Campbell, Paul R; Kline, David I; Rodriguez-Lanetty, Mauricio; Miller, David J; Dove, Sophie; Hoegh-Guldberg, Ove (2012): Major Cellular and Physiological Impacts of Ocean Acidification on a Reef Building Coral. PLoS ONE, 7(4), e34659, https://doi.org/10.1371/journal.pone.0034659.s005 |
op_relation |
Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4 [webpage]. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 |
op_rights |
CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.83118010.1371/journal.pone.0034659.s005 |
_version_ |
1810469200664199168 |