Major cellular and physiological impacts of ocean acidification on a reef building coral

As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbon...

Full description

Bibliographic Details
Main Authors: Kaniewska, Paulina, Campbell, Paul R, Kline, David I, Rodriguez-Lanetty, Mauricio, Miller, David J, Dove, Sophie, Hoegh-Guldberg, Ove
Format: Dataset
Language:English
Published: PANGAEA 2012
Subjects:
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.831180
https://doi.org/10.1594/PANGAEA.831180
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.831180
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.831180 2024-09-15T18:27:55+00:00 Major cellular and physiological impacts of ocean acidification on a reef building coral Kaniewska, Paulina Campbell, Paul R Kline, David I Rodriguez-Lanetty, Mauricio Miller, David J Dove, Sophie Hoegh-Guldberg, Ove MEDIAN LATITUDE: -23.440735 * MEDIAN LONGITUDE: 151.911889 * SOUTH-BOUND LATITUDE: -23.449153 * WEST-BOUND LONGITUDE: 151.898827 * NORTH-BOUND LATITUDE: -23.432317 * EAST-BOUND LONGITUDE: 151.924951 2012 text/tab-separated-values, 19866 data points https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 en eng PANGAEA Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4 [webpage]. https://cran.r-project.org/package=seacarb https://doi.pangaea.de/10.1594/PANGAEA.831180 https://doi.org/10.1594/PANGAEA.831180 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Kaniewska, Paulina; Campbell, Paul R; Kline, David I; Rodriguez-Lanetty, Mauricio; Miller, David J; Dove, Sophie; Hoegh-Guldberg, Ove (2012): Major Cellular and Physiological Impacts of Ocean Acidification on a Reef Building Coral. PLoS ONE, 7(4), e34659, https://doi.org/10.1371/journal.pone.0034659.s005 Acropora millepora Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcification/Dissolution Calcification rate Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Category Cnidaria Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression fold change relative Gene expression (incl. proteomics) Gene name Heron_Reef Heron Reef Great Barrier Reef Queensland Identification Incubation duration Laboratory experiment OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Photosynthetic capacity oxygen production per cell Primary production/Photosynthesis dataset 2012 ftpangaea https://doi.org/10.1594/PANGAEA.83118010.1371/journal.pone.0034659.s005 2024-07-24T02:31:32Z As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbonate ion concentrations. Here, through the use of physiology measurements and cDNA microarrays, we show that changes in pH and ocean chemistry consistent with two scenarios put forward by the Intergovernmental Panel on Climate Change (IPCC) drive major changes in gene expression, respiration, photosynthesis and symbiosis of the coral, Acropora millepora, before affects on biomineralisation are apparent at the phenotype level. Under high CO2 conditions corals at the phenotype level lost over half their Symbiodinium populations, and had a decrease in both photosynthesis and respiration. Changes in gene expression were consistent with metabolic suppression, an increase in oxidative stress, apoptosis and symbiont loss. Other expression patterns demonstrate upregulation of membrane transporters, as well as the regulation of genes involved in membrane cytoskeletal interactions and cytoskeletal remodeling. These widespread changes in gene expression emphasize the need to expand future studies of ocean acidification to include a wider spectrum of cellular processes, many of which may occur before impacts on calcification. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(151.898827,151.924951,-23.432317,-23.449153)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcification/Dissolution
Calcification rate
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
Gene expression (incl. proteomics)
Gene name
Heron_Reef
Heron Reef
Great Barrier Reef
Queensland
Identification
Incubation duration
Laboratory experiment
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Photosynthetic capacity
oxygen production per cell
Primary production/Photosynthesis
spellingShingle Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcification/Dissolution
Calcification rate
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
Gene expression (incl. proteomics)
Gene name
Heron_Reef
Heron Reef
Great Barrier Reef
Queensland
Identification
Incubation duration
Laboratory experiment
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Photosynthetic capacity
oxygen production per cell
Primary production/Photosynthesis
Kaniewska, Paulina
Campbell, Paul R
Kline, David I
Rodriguez-Lanetty, Mauricio
Miller, David J
Dove, Sophie
Hoegh-Guldberg, Ove
Major cellular and physiological impacts of ocean acidification on a reef building coral
topic_facet Acropora millepora
Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcification/Dissolution
Calcification rate
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Category
Cnidaria
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene expression
fold change
relative
Gene expression (incl. proteomics)
Gene name
Heron_Reef
Heron Reef
Great Barrier Reef
Queensland
Identification
Incubation duration
Laboratory experiment
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Photosynthetic capacity
oxygen production per cell
Primary production/Photosynthesis
description As atmospheric levels of CO2 increase, reef-building corals are under greater stress from both increased sea surface temperatures and declining sea water pH. To date, most studies have focused on either coral bleaching due to warming oceans or declining calcification due to decreasing oceanic carbonate ion concentrations. Here, through the use of physiology measurements and cDNA microarrays, we show that changes in pH and ocean chemistry consistent with two scenarios put forward by the Intergovernmental Panel on Climate Change (IPCC) drive major changes in gene expression, respiration, photosynthesis and symbiosis of the coral, Acropora millepora, before affects on biomineralisation are apparent at the phenotype level. Under high CO2 conditions corals at the phenotype level lost over half their Symbiodinium populations, and had a decrease in both photosynthesis and respiration. Changes in gene expression were consistent with metabolic suppression, an increase in oxidative stress, apoptosis and symbiont loss. Other expression patterns demonstrate upregulation of membrane transporters, as well as the regulation of genes involved in membrane cytoskeletal interactions and cytoskeletal remodeling. These widespread changes in gene expression emphasize the need to expand future studies of ocean acidification to include a wider spectrum of cellular processes, many of which may occur before impacts on calcification.
format Dataset
author Kaniewska, Paulina
Campbell, Paul R
Kline, David I
Rodriguez-Lanetty, Mauricio
Miller, David J
Dove, Sophie
Hoegh-Guldberg, Ove
author_facet Kaniewska, Paulina
Campbell, Paul R
Kline, David I
Rodriguez-Lanetty, Mauricio
Miller, David J
Dove, Sophie
Hoegh-Guldberg, Ove
author_sort Kaniewska, Paulina
title Major cellular and physiological impacts of ocean acidification on a reef building coral
title_short Major cellular and physiological impacts of ocean acidification on a reef building coral
title_full Major cellular and physiological impacts of ocean acidification on a reef building coral
title_fullStr Major cellular and physiological impacts of ocean acidification on a reef building coral
title_full_unstemmed Major cellular and physiological impacts of ocean acidification on a reef building coral
title_sort major cellular and physiological impacts of ocean acidification on a reef building coral
publisher PANGAEA
publishDate 2012
url https://doi.pangaea.de/10.1594/PANGAEA.831180
https://doi.org/10.1594/PANGAEA.831180
op_coverage MEDIAN LATITUDE: -23.440735 * MEDIAN LONGITUDE: 151.911889 * SOUTH-BOUND LATITUDE: -23.449153 * WEST-BOUND LONGITUDE: 151.898827 * NORTH-BOUND LATITUDE: -23.432317 * EAST-BOUND LONGITUDE: 151.924951
long_lat ENVELOPE(151.898827,151.924951,-23.432317,-23.449153)
genre Ocean acidification
genre_facet Ocean acidification
op_source Supplement to: Kaniewska, Paulina; Campbell, Paul R; Kline, David I; Rodriguez-Lanetty, Mauricio; Miller, David J; Dove, Sophie; Hoegh-Guldberg, Ove (2012): Major Cellular and Physiological Impacts of Ocean Acidification on a Reef Building Coral. PLoS ONE, 7(4), e34659, https://doi.org/10.1371/journal.pone.0034659.s005
op_relation Lavigne, Héloïse; Gattuso, Jean-Pierre (2011): seacarb: seawater carbonate chemistry with R. R package version 2.4 [webpage]. https://cran.r-project.org/package=seacarb
https://doi.pangaea.de/10.1594/PANGAEA.831180
https://doi.org/10.1594/PANGAEA.831180
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.83118010.1371/journal.pone.0034659.s005
_version_ 1810469200664199168