(Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10....
Main Authors: | , |
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Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2006
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Subjects: | |
Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 |
_version_ | 1821652013382893568 |
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author | Schippers, Axel Neretin, Lev N |
author_facet | Schippers, Axel Neretin, Lev N |
author_sort | Schippers, Axel |
collection | PANGAEA - Data Publisher for Earth & Environmental Science |
description | Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (>400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms. |
format | Dataset |
genre | North Atlantic |
genre_facet | North Atlantic |
geographic | Pacific Pratt Malone |
geographic_facet | Pacific Pratt Malone |
id | ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.776050 |
institution | Open Polar |
language | English |
long_lat | ENVELOPE(176.683,176.683,-85.400,-85.400) ENVELOPE(-85.600,-85.600,-77.867,-77.867) ENVELOPE(-54.733030,-54.199480,9.453430,9.048630) |
op_collection_id | ftpangaea |
op_coverage | MEDIAN LATITUDE: 9.308948 * MEDIAN LONGITUDE: -54.397893 * SOUTH-BOUND LATITUDE: 9.048630 * WEST-BOUND LONGITUDE: -54.733030 * NORTH-BOUND LATITUDE: 9.453430 * EAST-BOUND LONGITUDE: -54.199480 * DATE/TIME START: 2003-01-21T13:20:00 * DATE/TIME END: 2003-10-28T10:10:00 * MINIMUM DEPTH, sediment/rock: 105.7 m * MAXIMUM DEPTH, sediment/rock: 643.0 m |
op_doi | https://doi.org/10.1594/PANGAEA.77605010.2973/odp.proc.sr.207.105.2006 |
op_relation | https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 |
op_rights | CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_source | Supplement to: Schippers, Axel; Neretin, Lev N (2006): Data report: Microbiological AODC and CARD-FISH analysis of black shale samples from the Demerara Rise, ODP Leg 207. In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-6, https://doi.org/10.2973/odp.proc.sr.207.105.2006 |
publishDate | 2006 |
publisher | PANGAEA |
record_format | openpolar |
spelling | ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.776050 2025-01-16T23:43:21+00:00 (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites Schippers, Axel Neretin, Lev N MEDIAN LATITUDE: 9.308948 * MEDIAN LONGITUDE: -54.397893 * SOUTH-BOUND LATITUDE: 9.048630 * WEST-BOUND LONGITUDE: -54.733030 * NORTH-BOUND LATITUDE: 9.453430 * EAST-BOUND LONGITUDE: -54.199480 * DATE/TIME START: 2003-01-21T13:20:00 * DATE/TIME END: 2003-10-28T10:10:00 * MINIMUM DEPTH, sediment/rock: 105.7 m * MAXIMUM DEPTH, sediment/rock: 643.0 m 2006 text/tab-separated-values, 90 data points https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Schippers, Axel; Neretin, Lev N (2006): Data report: Microbiological AODC and CARD-FISH analysis of black shale samples from the Demerara Rise, ODP Leg 207. In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-6, https://doi.org/10.2973/odp.proc.sr.207.105.2006 207-1257C 207-1258B 207-1259C 207-1261B Acridine Orange Direct Counting (AODC) Archaea Bacteria abundance Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) DEPTH sediment/rock DRILL Drilling/drill rig DSDP/ODP/IODP sample designation Event label Joides Resolution Leg207 North Atlantic Ocean Ocean Drilling Program ODP Prokaryotes abundance as single cells Sample code/label Sample comment Walvis Ridge Southeast Atlantic Ocean dataset 2006 ftpangaea https://doi.org/10.1594/PANGAEA.77605010.2973/odp.proc.sr.207.105.2006 2024-08-21T00:02:27Z Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (>400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms. Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science Pacific Pratt ENVELOPE(176.683,176.683,-85.400,-85.400) Malone ENVELOPE(-85.600,-85.600,-77.867,-77.867) ENVELOPE(-54.733030,-54.199480,9.453430,9.048630) |
spellingShingle | 207-1257C 207-1258B 207-1259C 207-1261B Acridine Orange Direct Counting (AODC) Archaea Bacteria abundance Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) DEPTH sediment/rock DRILL Drilling/drill rig DSDP/ODP/IODP sample designation Event label Joides Resolution Leg207 North Atlantic Ocean Ocean Drilling Program ODP Prokaryotes abundance as single cells Sample code/label Sample comment Walvis Ridge Southeast Atlantic Ocean Schippers, Axel Neretin, Lev N (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title | (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title_full | (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title_fullStr | (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title_full_unstemmed | (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title_short | (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites |
title_sort | (table t1) total procaryotes, and living bacteria and archaea in black shales of odp leg 207 sites |
topic | 207-1257C 207-1258B 207-1259C 207-1261B Acridine Orange Direct Counting (AODC) Archaea Bacteria abundance Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) DEPTH sediment/rock DRILL Drilling/drill rig DSDP/ODP/IODP sample designation Event label Joides Resolution Leg207 North Atlantic Ocean Ocean Drilling Program ODP Prokaryotes abundance as single cells Sample code/label Sample comment Walvis Ridge Southeast Atlantic Ocean |
topic_facet | 207-1257C 207-1258B 207-1259C 207-1261B Acridine Orange Direct Counting (AODC) Archaea Bacteria abundance Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) DEPTH sediment/rock DRILL Drilling/drill rig DSDP/ODP/IODP sample designation Event label Joides Resolution Leg207 North Atlantic Ocean Ocean Drilling Program ODP Prokaryotes abundance as single cells Sample code/label Sample comment Walvis Ridge Southeast Atlantic Ocean |
url | https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 |