(Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites

Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10....

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Bibliographic Details
Main Authors: Schippers, Axel, Neretin, Lev N
Format: Dataset
Language:English
Published: PANGAEA 2006
Subjects:
ODP
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.776050
https://doi.org/10.1594/PANGAEA.776050
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.776050
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.776050 2024-09-15T18:23:57+00:00 (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites Schippers, Axel Neretin, Lev N MEDIAN LATITUDE: 9.308948 * MEDIAN LONGITUDE: -54.397893 * SOUTH-BOUND LATITUDE: 9.048630 * WEST-BOUND LONGITUDE: -54.733030 * NORTH-BOUND LATITUDE: 9.453430 * EAST-BOUND LONGITUDE: -54.199480 * DATE/TIME START: 2003-01-21T13:20:00 * DATE/TIME END: 2003-10-28T10:10:00 * MINIMUM DEPTH, sediment/rock: 105.7 m * MAXIMUM DEPTH, sediment/rock: 643.0 m 2006 text/tab-separated-values, 90 data points https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.776050 https://doi.org/10.1594/PANGAEA.776050 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Supplement to: Schippers, Axel; Neretin, Lev N (2006): Data report: Microbiological AODC and CARD-FISH analysis of black shale samples from the Demerara Rise, ODP Leg 207. In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-6, https://doi.org/10.2973/odp.proc.sr.207.105.2006 207-1257C 207-1258B 207-1259C 207-1261B Acridine Orange Direct Counting (AODC) Archaea Bacteria abundance Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) DEPTH sediment/rock DRILL Drilling/drill rig DSDP/ODP/IODP sample designation Event label Joides Resolution Leg207 North Atlantic Ocean Ocean Drilling Program ODP Prokaryotes abundance as single cells Sample code/label Sample comment Walvis Ridge Southeast Atlantic Ocean dataset 2006 ftpangaea https://doi.org/10.1594/PANGAEA.77605010.2973/odp.proc.sr.207.105.2006 2024-08-21T00:02:27Z Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (>400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms. Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-54.733030,-54.199480,9.453430,9.048630)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic 207-1257C
207-1258B
207-1259C
207-1261B
Acridine Orange Direct Counting (AODC)
Archaea
Bacteria
abundance
Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
DEPTH
sediment/rock
DRILL
Drilling/drill rig
DSDP/ODP/IODP sample designation
Event label
Joides Resolution
Leg207
North Atlantic Ocean
Ocean Drilling Program
ODP
Prokaryotes
abundance as single cells
Sample code/label
Sample comment
Walvis Ridge
Southeast Atlantic Ocean
spellingShingle 207-1257C
207-1258B
207-1259C
207-1261B
Acridine Orange Direct Counting (AODC)
Archaea
Bacteria
abundance
Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
DEPTH
sediment/rock
DRILL
Drilling/drill rig
DSDP/ODP/IODP sample designation
Event label
Joides Resolution
Leg207
North Atlantic Ocean
Ocean Drilling Program
ODP
Prokaryotes
abundance as single cells
Sample code/label
Sample comment
Walvis Ridge
Southeast Atlantic Ocean
Schippers, Axel
Neretin, Lev N
(Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
topic_facet 207-1257C
207-1258B
207-1259C
207-1261B
Acridine Orange Direct Counting (AODC)
Archaea
Bacteria
abundance
Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
DEPTH
sediment/rock
DRILL
Drilling/drill rig
DSDP/ODP/IODP sample designation
Event label
Joides Resolution
Leg207
North Atlantic Ocean
Ocean Drilling Program
ODP
Prokaryotes
abundance as single cells
Sample code/label
Sample comment
Walvis Ridge
Southeast Atlantic Ocean
description Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (>400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms.
format Dataset
author Schippers, Axel
Neretin, Lev N
author_facet Schippers, Axel
Neretin, Lev N
author_sort Schippers, Axel
title (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
title_short (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
title_full (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
title_fullStr (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
title_full_unstemmed (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites
title_sort (table t1) total procaryotes, and living bacteria and archaea in black shales of odp leg 207 sites
publisher PANGAEA
publishDate 2006
url https://doi.pangaea.de/10.1594/PANGAEA.776050
https://doi.org/10.1594/PANGAEA.776050
op_coverage MEDIAN LATITUDE: 9.308948 * MEDIAN LONGITUDE: -54.397893 * SOUTH-BOUND LATITUDE: 9.048630 * WEST-BOUND LONGITUDE: -54.733030 * NORTH-BOUND LATITUDE: 9.453430 * EAST-BOUND LONGITUDE: -54.199480 * DATE/TIME START: 2003-01-21T13:20:00 * DATE/TIME END: 2003-10-28T10:10:00 * MINIMUM DEPTH, sediment/rock: 105.7 m * MAXIMUM DEPTH, sediment/rock: 643.0 m
long_lat ENVELOPE(-54.733030,-54.199480,9.453430,9.048630)
genre North Atlantic
genre_facet North Atlantic
op_source Supplement to: Schippers, Axel; Neretin, Lev N (2006): Data report: Microbiological AODC and CARD-FISH analysis of black shale samples from the Demerara Rise, ODP Leg 207. In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-6, https://doi.org/10.2973/odp.proc.sr.207.105.2006
op_relation https://doi.pangaea.de/10.1594/PANGAEA.776050
https://doi.org/10.1594/PANGAEA.776050
op_rights CC-BY-3.0: Creative Commons Attribution 3.0 Unported
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.77605010.2973/odp.proc.sr.207.105.2006
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