Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature
The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1...
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.149999 https://doi.org/10.1594/PANGAEA.149999 |
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Open Polar |
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PANGAEA - Data Publisher for Earth & Environmental Science |
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ftpangaea |
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English |
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Biological process Country Experimental treatment Geographic name/locality Number Persistent Identifier Taxon/taxa Title |
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Biological process Country Experimental treatment Geographic name/locality Number Persistent Identifier Taxon/taxa Title Ocean Acidification International Coordination Centre (OA-ICC) Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
topic_facet |
Biological process Country Experimental treatment Geographic name/locality Number Persistent Identifier Taxon/taxa Title |
description |
The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1594/PANGAEA.149999). By January 2015, a total of 581 data sets (over 4 000 000 data points) from 539 papers had been archived. Here we present the developments of this data compilation five years since its first description by Nisumaa et al. (2010). Most of study sites from which data archived are still in the Northern Hemisphere and the number of archived data from studies from the Southern Hemisphere and polar oceans are still relatively low. Data from 60 studies that investigated the response of a mix of organisms or natural communities were all added after 2010, indicating a welcomed shift from the study of individual organisms to communities and ecosystems. The initial imbalance of considerably more data archived on calcification and primary production than on other processes has improved. There is also a clear tendency towards more data archived from multifactorial studies after 2010. For easier and more effective access to ocean acidification data, the ocean acidification community is strongly encouraged to contribute to the data archiving effort, and help develop standard vocabularies describing the variables and define best practices for archiving ocean acidification data. |
format |
Dataset |
author |
Ocean Acidification International Coordination Centre (OA-ICC) |
author_facet |
Ocean Acidification International Coordination Centre (OA-ICC) |
author_sort |
Ocean Acidification International Coordination Centre (OA-ICC) |
title |
Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
title_short |
Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
title_full |
Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
title_fullStr |
Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
title_full_unstemmed |
Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
title_sort |
data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature |
publisher |
PANGAEA |
publishDate |
2015 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.149999 https://doi.org/10.1594/PANGAEA.149999 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_source |
Supplement to: Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016 |
op_relation |
Aberle, Nicole; Schulz, Kai Georg; Stuhr, Annegret; Malzahn, Arne; Ludwig, Andrea; Riebesell, Ulf (2013): High tolerance of microzooplankton to ocean acidification in an Arctic coastal plankton community. Biogeosciences, 10(3), 1471-1481, https://doi.org/10.5194/bg-10-1471-2013 Agostini, Sylvain; Fujimura, Hiroyuki; Higuchi, Tomihiko; Yuyama, Ikuko; Casareto, Beatriz E; Suzuki, Yoshimi; Nakano, Yoshiyuki (2013): The effects of thermal and high-CO2 stresses on the metabolism and surrounding microenvironment of the coral Galaxea fascicularis. Comptes Rendus Biologies, 336(8), 384-391, https://doi.org/10.1016/j.crvi.2013.07.003 Albright, R; Mason, B; Langdon, Chris (2008): Effect of aragonite saturation state on settlement and post-settlement growth of Porites astreoides larvae. Coral Reefs, 27(3), 485-490, https://doi.org/10.1007/s00338-008-0392-5 Alexandre, Ana; Silva, João; Buapet, Pimchanok; Björk, Mats; Santos, Rui (2012): Effects of CO2 enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii. Ecology and Evolution, 2(10), 2625-2635, https://doi.org/10.1002/ece3.333 Allan, Bridie J M; Domenici, Paolo; McCormick, Mark I; Watson, Sue-Ann; Munday, Philip L (2013): Elevated CO2 Affects Predator-Prey Interactions through Altered Performance. PLoS ONE, 8(3), e58520, https://doi.org/10.1371/journal.pone.0058520.t002 Allan, Bridie J M; Miller, Garielle M; McCormick, Mark I; Domenici, Paolo; Munday, Philip L (2014): Parental effects improve escape performance of juvenile reef fish in a high-CO2 world. Proceedings of the Royal Society B-Biological Sciences, 281(1777), 20132179-20132179, https://doi.org/10.1098/rspb.2013.2179 Allen, Katherine A; Hönish, Bärbel; Eggins, Stephen M; Yu, Jimin; Spero, Howard J; Elderfield, Henry (2011): Controls on boron incorporation in cultured tests of the planktic foraminifer Orbulina universa. Earth and Planetary Science Letters, 309(3-4), 291-301, https://doi.org/10.1016/j.epsl.2011.07.010 Allgaier, Martin; Riebesell, Ulf; Vogt, Meike; Thyrhaug, Runar; Grossart, Hans-Peter (2008): Coupling of heterotrophic bacteria to phytoplankton bloom development at different pCO2 levels: a mesocosm study. Biogeosciences, 5(4), 1007-1022, https://doi.org/10.5194/bg-5-1007-2008 Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360, https://doi.org/10.1016/j.gca.2011.08.012 Alsterberg, Christian; Eklöf, Johan S; Gamfeldt, Lars; Havenhand, Jonathan N; Sundbäck, Kristina (2013): Consumers mediate the effects of experimental ocean acidification and warming on primary producers. Proceedings of the National Academy of Sciences, 110(21), 8603-8608, https://doi.org/10.1073/pnas.1303797110 Andersen, Sissel; Grefsrud, E S; Harboe, T (2013): Effect of increased pCO2 level on early shell development in great scallop (Pecten maximus Lamarck) larvae. Biogeosciences, 10(10), 6161-6184, https://doi.org/10.5194/bg-10-6161-2013 Andersson, Andreas J; Kuffner, Ilsa B; Mackenzie, Fred T; Jokiel, Paul L; Rodgers, Ku'ulei; Tan, A (2009): Net Loss of CaCO3 from a subtropical calcifying community due to seawater acidification: mesocosm-scale experimental evidence. Biogeosciences, 6(8), 1811-1823, https://doi.org/10.5194/bg-6-1811-2009 Andersson, Andreas J; Mackenzie, Fred T; Bates, Nicolas R (2008): Life on the margin: implications of ocean acidification on Mg-calcite, high latitude and cold-water marine calcifiers. Marine Ecology Progress Series, 373, 265-273, https://doi.org/10.3354/meps07639 Anlauf, Holger; D'Croz, Luis; O'Dea, Aaron (2011): A corrosive concoction: The combined effects of ocean warming and acidification on the early growth of a stony coral are multiplicative. Journal of Experimental Marine Biology and Ecology, 397(1), 13-20, https://doi.org/10.1016/j.jembe.2010.11.009 Anthony, Kenneth R N; Kline, David I; Diaz-Pulido, Guillermo; Dove, Sophie; Hoegh-Guldberg, Ove (2008): Ocean acidification causes bleaching and productivity loss in coral reef builders. Proceedings of the National Academy of Sciences of the United States of America, 105(45), 7442-7446, https://doi.org/10.1073/pnas.0804478105 Antia, Avan N; Suffrian, K; Holste, Linda; Müller, Marius N; Nejstgaard, Jens Christian; Simonelli, P; Carotenuto, Y; Putzeys, S (2008): Dissolution of coccolithophorid calcite by microzooplankton and copepod grazing. Biogeosciences Discussions, 5(1), 1-23, https://doi.org/10.5194/bgd-5-1-2008 Apostolaki, Eugenia T; Vizzini, Salvatrice; Hendriks, Iris; Olsen, Ylva (2014): Seagrass ecosystem response to long-term high CO2 in a Mediterranean volcanic vent. Marine Environmental Research, 99, 9-15, https://doi.org/10.1016/j.marenvres.2014.05.008 Appelhans, Yasmin S; Thomsen, Jörn; Opitz, Stephan; Pansch, Christian; Melzner, Frank; Wahl, Martin (2014): Juvenile sea stars exposed to acidification decrease feeding and growth with no acclimation potential. Marine Ecology Progress Series, 509, 227-239, https://doi.org/10.3354/meps10884 Archer, S D; Kimmance, S A; Stephens, J A; Hopkins, Frances E; Bellerby, Richard G J; Schulz, Kai Georg; Piontek, Judith; Engel, Anja (2013): Contrasting responses of DMS and DMSP to ocean acidification in Arctic waters. Biogeosciences, 10(3), 1893-1908, https://doi.org/10.5194/bg-10-1893-2013 Arnold, Thomas; Freundlich, Grace; Weilnau, Taylor; Verdi, Arielle; Tibbetts, Ian R (2014): Impacts of groundwater discharge at Myora Springs (North Stradbroke Island, Australia) on the phenolic metabolism of eelgrass, Zostera muelleri, and grazing by the juvenile rabbitfish, Siganus fuscescens. PLoS ONE, 9(8), e104738, https://doi.org/10.1371/journal.pone.0104738.t003 Arnold, Thomas; Mealey, Christopher; Leahey, Hannah; Miller, A Whitman; Hall-Spencer, Jason M; Milazzo, Marco; Maers, Kelly (2012): Ocean Acidification and the Loss of Phenolic Substances in Marine Plants. PLoS ONE, 7(4), e35107, https://doi.org/10.1371/journal.pone.0035107.t004 Arnosti, Carol; Grossart, Hans-Peter; Mühling, M; Joint, Ian; Passow, Uta (2011): Dynamics of extracellular enzyme activities in seawater under changed atmospheric pCO2: a mesocosm investigation. Aquatic Microbial Ecology, 64(3), 285-298, https://doi.org/10.3354/ame01522 Asnaghi, Valentina; Chiantore, Mariachiara; Mangialajo, Luisa; Gazeau, Frédéric; Francour, Patrice; Alliouane, Samir; Gattuso, Jean-Pierre (2013): Cascading Effects of Ocean Acidification in a Rocky Subtidal Community. PLoS ONE, 8(4), e61978, https://doi.org/10.1371/journal.pone.0061978.t004 Asnaghi, Valentina; Mangialajo, Luisa; Gattuso, Jean-Pierre; Francour, Patrice; Privitera, Davide; Chiantore, Mariachiara (2014): Effects of ocean acidification and diet on thickness and carbonate elemental composition of the test of juvenile sea urchins. Marine Environmental Research, 93, 78-84, https://doi.org/10.1016/j.marenvres.2013.08.005 Bach, Lennart Thomas; Mackinder, Luke C M; Schulz, Kai Georg; Wheeler, Glen; Schroeder, Declan C; Brownlee, Colin; Riebesell, Ulf (2013): Dissecting the impact of CO2 and pH on the mechanisms of photosynthesis and calcification in the coccolithophore Emiliania huxleyi. New Phytologist, 199(1), 121-134, https://doi.org/10.1111/nph.12225 Bach, Lennart Thomas; Riebesell, Ulf; Schulz, Kai Georg (2011): Distinguishing between the effects of ocean acidification and ocean carbonation in the coccolithophore Emiliania huxleyi. Limnology and Oceanography, 56(6), 2040-2050, https://doi.org/10.4319/lo.2011.56.6.2040 Baggini, Cecilia; Salomidi, Maria; Voutsinas, Emanuela; Bray, Laura; Krasakopoulou, Evangelia; Hall-Spencer, Jason M (2014): Seasonality Affects Macroalgal Community Response to Increases in pCO2. PLoS ONE, 9(9), e106520, https://doi.org/10.1371/journal.pone.0106520 Barcelos e Ramos, Joana; Biswas, Haimanti; Schulz, Kai Georg; LaRoche, Julie; Riebesell, Ulf (2007): Effect of rising atmospheric carbon dioxide on the marine nitrogen fixer Trichodesmium. Global Biogeochemical Cycles, 21, https://doi.org/10.1029/2006GB002898 Barcelos e Ramos, Joana; Müller, Marius N; Riebesell, Ulf (2010): Short-term response of the coccolithophore Emiliania huxleyi to an abrupt change in seawater carbon dioxide concentrations. Biogeosciences, 7(1), 177-186, https://doi.org/10.5194/bg-7-177-2010 Barcelos e Ramos, Joana; Schulz, Kai Georg; Brownlee, Colin; Sett, Scarlett; Azevedo, Eduardo Brito (2014): Effects of Increasing Seawater Carbon Dioxide Concentrations on Chain Formation of the Diatom Asterionellopsis glacialis. PLoS ONE, 9(3), e90749, https://doi.org/10.1371/journal.pone.0090749 Basallote, M Dolores; De Orte, Manoela R; DelValls, T Angel; Riba, Inmaculada (2014): Studying the Effect of CO2-Induced Acidification on Sediment Toxicity Using Acute Amphipod Toxicity Test. Environmental Science & Technology, 48(15), 8864-8872, https://doi.org/10.1021/es5015373 Bates, Nicolas R; Amat, A; Andersson, Andreas J (2010): Feedbacks and responses of coral calcification on the Bermuda reef system to seasonal changes in biological processes and ocean acidification. Biogeosciences, 7(8), 2509-2530, https://doi.org/10.5194/bg-7-2509-2010 Baumann, Hannes; Talmage, Stephanie C; Gobler, Christopher J (2012): Reduced early life growth and survival in a fish in direct response to increased carbon dioxide. Nature Climate Change, 2, 38-41, https://doi.org/10.1038/nclimate1291 Beaufort, Luc; Probert, Ian; de Garidel-Thoron, Thibault; Bendif, E M; Ruiz-Pino, Diana; Metzi, N; Goyet, Catherine; Buchet, Noëlle; Coupel, Pierre; Grelaud, Michaël; Rost, Björn; Rickaby, Rosalind E M; De Vargas, Colomban (2011): Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature, 476, 80-83, https://doi.org/10.1038/nature10295 Bechmann, Renée Katrin; Taban, Ingrid Christina; Westerlund, Stig; Godal, Brit Fjone; Arnberg, Maj; Vingen, Sjur; Ingvarsdottir, Anna; Baussant, Thierry (2011): Effects of ocean acidification on early life stages of shrimp (Pandalus borealis) and mussel (Mytilus edulis). Journal of Toxicology and Environmental Health-Part A-Current Issues, 74(7-9), 424-438, https://doi.org/10.1080/15287394.2011.550460 Bednaršek, Nina; Tarling, Geraint A; Bakker, Dorothee C E; Fielding, Sophie; Cohen, Anne L; Kuzirian, Alan; McCorkle, Daniel C; Lézé, Bertrand; Montagna, Roberto (2012): Description and quantification of pteropod shell dissolution: A sensitive bioindicator of ocean acidification. Global Change Biology, 18(7), 2378-2388, https://doi.org/10.1111/j.1365-2486.2012.02668.x Bednaršek, Nina; Tarling, Geraint A; Bakker, Dorothee C E; Fielding, Sophie; Jones, Elizabeth M; Venables, H J; Ward, Peter; Kuzirian, Alan; Lézé, Bertrand; Feely, Richard A; Murphy, Eugene J (2012): Extensive dissolution of live pteropods in the Southern Ocean. Nature Geoscience, 5(12), 881-885, https://doi.org/10.1038/ngeo1635 Bellerby, Richard G J; Schulz, Kai Georg; Riebesell, Ulf; Neill, Craig; Nondal, G; Heegaard, E; Johannessen, Truls; Brown, K R (2008): Marine ecosystem community carbon and nutrient uptake stoichiometry under varying ocean acidification during the PeECE III experiment. Biogeosciences, 5(6), 1517-1527, https://doi.org/10.5194/bg-5-1517-2008 Beniash, Elia; Ivanina, Anna; Lieb, Nicholas S; Kurochkin, Ilya; Sokolova, Inna A (2010): Elevated level of carbon dioxide affects metabolism and shell formation in oysters Crassostrea virginica. Marine Ecology Progress Series, 419, 95-108, https://doi.org/10.3354/meps08841 Bibby, Ruth; Cleall-Harding, Polly; Rundle, Simon; Widdicombe, Stephen; Spicer, John I (2007): Ocean acidification disrupts induced defences in the intertidal gastropod Littorina littorea. Biology Letters, 3(6), 699-701, https://doi.org/10.1098/rsbl.2007.0457 Bibby, Ruth; Widdicombe, Stephen; Parry, Helen E; Spicer, John I; Pipe, R (2008): Effects of ocean acidification on the immune response of the blue mussel Mytilus edulis. Aquatic Biology, 2(1), 97-74, https://doi.org/10.3354/ab00037 Biermann, Antje; Engel, Anja (2010): Effect of CO2 on the properties and sinking velocity of aggregates of the coccolithophore Emiliania huxleyi. Biogeosciences, 7(3), 1017-1029, https://doi.org/10.5194/bg-7-1017-2010 Biswas, Haimanti; Cros, Alexander; Yadav, Kamana; Ramana, V Venkata; Prasad, V Rajendra; Archaryya, Tamoghna; Babu, P V Raghunadh (2011): The response of a natural phytoplankton community from the Godavari River Estuary to increasing CO2 concentration during the pre-monsoon period. Journal of Experimental Marine Biology and Ecology, 407(2), 284-293, https://doi.org/10.1016/j.jembe.2011.06.027 Bögner, Desislava; Bickmeyer, Ulf; Köhler, Angela (2014): CO2-induced fertilization impairment in Strongylocentrotus droebachiensis collected in the Arctic. Helgoland Marine Research, 68(2), 341-356, https://doi.org/10.1007/s10152-014-0394-3 Borchard, Corinna; Borges, Alberto Vieira; Händel, Nicole; Engel, Anja (2011): Biogeochemical response of Emiliania huxleyi (PML B92/11) to elevated CO2 and temperature under phosphorous limitation: A chemostat study. Journal of Experimental Marine Biology and Ecology, 410, 61-71, https://doi.org/10.1016/j.jembe.2011.10.004 Borchard, Corinna; Engel, Anja (2012): Organic matter exudation by Emiliania huxleyi under simulated future ocean conditions. Biogeosciences, 9(8), 3405-3423, https://doi.org/10.5194/bg-9-3405-2012 Boucher, Guy; Clavier, Jacques; Garrigue, Claire (1994): Oxygen and carbon dioxide fluxes at the water-sediment interface of a tropical lagoon. Marine Ecology Progress Series, 107, 185-193, https://doi.org/10.3354/meps107185 Brading, Patrick; Warner, Mark E; Davey, Philip; Smith, David J; Achterberg, Eric Pieter; Suggett, David J (2011): Differential effects of ocean acidification on growth and photosynthesis among phylotypes of Symbiodinium (Dinophyceae). Limnology and Oceanography, 56(3), 927-938, https://doi.org/10.4319/lo.2011.56.3.0927 Braeckman, Ulrike; Van Colen, Carl; Guilini, Katja; Van Gansbeke, D; Soetaert, Karline; Vincx, Magda; Vanaverbeke, Jan; Vopel, Kay (2014): Empirical Evidence Reveals Seasonally Dependent Reduction in Nitrification in Coastal Sediments Subjected to Near Future Ocean Acidification. PLoS ONE, 9(10), e108153, https://doi.org/10.1371/journal.pone.0108153.s002 Bramanti, Lorenzo; Movilla, Juancho; Guron, Maricel; Calvo, Eva; Gori, Andrea; Dominguez-Cariò, Carlos; Grinyó, Jordi; Lopez-Sanz, Angel; Martinez-Quintana, Angela; Pelejero, Carles; Ziveri, Patrizia; Rossi, Sergio (2013): Detrimental effects of ocean acidification on the economically important Mediterranean red coral (Corallium rubrum). Global Change Biology, 19(6), 1897-1908, https://doi.org/10.1111/gcb.12171 |
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CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess |
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https://doi.org/10.1594/PANGAEA.14999910.5194/essd-8-79-201610.5194/bg-10-1471-201310.1016/j.crvi.2013.07.00310.1007/s00338-008-0392-510.1002/ece3.33310.1371/journal.pone.0058520.t00210.1098/rspb.2013.217910.1016/j.epsl.2011.07.01010.5194/bg-5-1007-200810 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.149999 2024-10-29T17:46:37+00:00 Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature Ocean Acidification International Coordination Centre (OA-ICC) 2015 text/tab-separated-values, 4644 data points https://doi.pangaea.de/10.1594/PANGAEA.149999 https://doi.org/10.1594/PANGAEA.149999 en eng PANGAEA Aberle, Nicole; Schulz, Kai Georg; Stuhr, Annegret; Malzahn, Arne; Ludwig, Andrea; Riebesell, Ulf (2013): High tolerance of microzooplankton to ocean acidification in an Arctic coastal plankton community. Biogeosciences, 10(3), 1471-1481, https://doi.org/10.5194/bg-10-1471-2013 Agostini, Sylvain; Fujimura, Hiroyuki; Higuchi, Tomihiko; Yuyama, Ikuko; Casareto, Beatriz E; Suzuki, Yoshimi; Nakano, Yoshiyuki (2013): The effects of thermal and high-CO2 stresses on the metabolism and surrounding microenvironment of the coral Galaxea fascicularis. Comptes Rendus Biologies, 336(8), 384-391, https://doi.org/10.1016/j.crvi.2013.07.003 Albright, R; Mason, B; Langdon, Chris (2008): Effect of aragonite saturation state on settlement and post-settlement growth of Porites astreoides larvae. Coral Reefs, 27(3), 485-490, https://doi.org/10.1007/s00338-008-0392-5 Alexandre, Ana; Silva, João; Buapet, Pimchanok; Björk, Mats; Santos, Rui (2012): Effects of CO2 enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii. Ecology and Evolution, 2(10), 2625-2635, https://doi.org/10.1002/ece3.333 Allan, Bridie J M; Domenici, Paolo; McCormick, Mark I; Watson, Sue-Ann; Munday, Philip L (2013): Elevated CO2 Affects Predator-Prey Interactions through Altered Performance. PLoS ONE, 8(3), e58520, https://doi.org/10.1371/journal.pone.0058520.t002 Allan, Bridie J M; Miller, Garielle M; McCormick, Mark I; Domenici, Paolo; Munday, Philip L (2014): Parental effects improve escape performance of juvenile reef fish in a high-CO2 world. Proceedings of the Royal Society B-Biological Sciences, 281(1777), 20132179-20132179, https://doi.org/10.1098/rspb.2013.2179 Allen, Katherine A; Hönish, Bärbel; Eggins, Stephen M; Yu, Jimin; Spero, Howard J; Elderfield, Henry (2011): Controls on boron incorporation in cultured tests of the planktic foraminifer Orbulina universa. Earth and Planetary Science Letters, 309(3-4), 291-301, https://doi.org/10.1016/j.epsl.2011.07.010 Allgaier, Martin; Riebesell, Ulf; Vogt, Meike; Thyrhaug, Runar; Grossart, Hans-Peter (2008): Coupling of heterotrophic bacteria to phytoplankton bloom development at different pCO2 levels: a mesocosm study. Biogeosciences, 5(4), 1007-1022, https://doi.org/10.5194/bg-5-1007-2008 Allison, Nicola; Cohen, Itay; Finch, Adrian A; Erez, Jonathan; EMIF (2011): Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta, 75(21), 6350-6360, https://doi.org/10.1016/j.gca.2011.08.012 Alsterberg, Christian; Eklöf, Johan S; Gamfeldt, Lars; Havenhand, Jonathan N; Sundbäck, Kristina (2013): Consumers mediate the effects of experimental ocean acidification and warming on primary producers. Proceedings of the National Academy of Sciences, 110(21), 8603-8608, https://doi.org/10.1073/pnas.1303797110 Andersen, Sissel; Grefsrud, E S; Harboe, T (2013): Effect of increased pCO2 level on early shell development in great scallop (Pecten maximus Lamarck) larvae. Biogeosciences, 10(10), 6161-6184, https://doi.org/10.5194/bg-10-6161-2013 Andersson, Andreas J; Kuffner, Ilsa B; Mackenzie, Fred T; Jokiel, Paul L; Rodgers, Ku'ulei; Tan, A (2009): Net Loss of CaCO3 from a subtropical calcifying community due to seawater acidification: mesocosm-scale experimental evidence. Biogeosciences, 6(8), 1811-1823, https://doi.org/10.5194/bg-6-1811-2009 Andersson, Andreas J; Mackenzie, Fred T; Bates, Nicolas R (2008): Life on the margin: implications of ocean acidification on Mg-calcite, high latitude and cold-water marine calcifiers. Marine Ecology Progress Series, 373, 265-273, https://doi.org/10.3354/meps07639 Anlauf, Holger; D'Croz, Luis; O'Dea, Aaron (2011): A corrosive concoction: The combined effects of ocean warming and acidification on the early growth of a stony coral are multiplicative. Journal of Experimental Marine Biology and Ecology, 397(1), 13-20, https://doi.org/10.1016/j.jembe.2010.11.009 Anthony, Kenneth R N; Kline, David I; Diaz-Pulido, Guillermo; Dove, Sophie; Hoegh-Guldberg, Ove (2008): Ocean acidification causes bleaching and productivity loss in coral reef builders. Proceedings of the National Academy of Sciences of the United States of America, 105(45), 7442-7446, https://doi.org/10.1073/pnas.0804478105 Antia, Avan N; Suffrian, K; Holste, Linda; Müller, Marius N; Nejstgaard, Jens Christian; Simonelli, P; Carotenuto, Y; Putzeys, S (2008): Dissolution of coccolithophorid calcite by microzooplankton and copepod grazing. Biogeosciences Discussions, 5(1), 1-23, https://doi.org/10.5194/bgd-5-1-2008 Apostolaki, Eugenia T; Vizzini, Salvatrice; Hendriks, Iris; Olsen, Ylva (2014): Seagrass ecosystem response to long-term high CO2 in a Mediterranean volcanic vent. Marine Environmental Research, 99, 9-15, https://doi.org/10.1016/j.marenvres.2014.05.008 Appelhans, Yasmin S; Thomsen, Jörn; Opitz, Stephan; Pansch, Christian; Melzner, Frank; Wahl, Martin (2014): Juvenile sea stars exposed to acidification decrease feeding and growth with no acclimation potential. Marine Ecology Progress Series, 509, 227-239, https://doi.org/10.3354/meps10884 Archer, S D; Kimmance, S A; Stephens, J A; Hopkins, Frances E; Bellerby, Richard G J; Schulz, Kai Georg; Piontek, Judith; Engel, Anja (2013): Contrasting responses of DMS and DMSP to ocean acidification in Arctic waters. Biogeosciences, 10(3), 1893-1908, https://doi.org/10.5194/bg-10-1893-2013 Arnold, Thomas; Freundlich, Grace; Weilnau, Taylor; Verdi, Arielle; Tibbetts, Ian R (2014): Impacts of groundwater discharge at Myora Springs (North Stradbroke Island, Australia) on the phenolic metabolism of eelgrass, Zostera muelleri, and grazing by the juvenile rabbitfish, Siganus fuscescens. 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Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016 Biological process Country Experimental treatment Geographic name/locality Number Persistent Identifier Taxon/taxa Title dataset 2015 ftpangaea https://doi.org/10.1594/PANGAEA.14999910.5194/essd-8-79-201610.5194/bg-10-1471-201310.1016/j.crvi.2013.07.00310.1007/s00338-008-0392-510.1002/ece3.33310.1371/journal.pone.0058520.t00210.1098/rspb.2013.217910.1016/j.epsl.2011.07.01010.5194/bg-5-1007-200810 2024-10-09T00:07:51Z The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1594/PANGAEA.149999). By January 2015, a total of 581 data sets (over 4 000 000 data points) from 539 papers had been archived. Here we present the developments of this data compilation five years since its first description by Nisumaa et al. (2010). Most of study sites from which data archived are still in the Northern Hemisphere and the number of archived data from studies from the Southern Hemisphere and polar oceans are still relatively low. Data from 60 studies that investigated the response of a mix of organisms or natural communities were all added after 2010, indicating a welcomed shift from the study of individual organisms to communities and ecosystems. The initial imbalance of considerably more data archived on calcification and primary production than on other processes has improved. There is also a clear tendency towards more data archived from multifactorial studies after 2010. For easier and more effective access to ocean acidification data, the ocean acidification community is strongly encouraged to contribute to the data archiving effort, and help develop standard vocabularies describing the variables and define best practices for archiving ocean acidification data. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science |