The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE

INTRODUCTION: Stenotrophomonas maltophilia, which is able to form a biofilm, has mostly been related to catheters when it is the agent in hospital infections; these infections generally present as bacteremia and pneumonia, which may progress with complications and result in death. METHODOLOGY: The s...

Full description

Bibliographic Details
Main Authors: Çalışkan, Ahmet, Çopur Çicek, A., Aydogan Ejder, N., Karagöz, A., Kirişci, Ö., Kılıç, S.
Other Authors: orcid:0000-0002-1156-3787
Format: Article in Journal/Newspaper
Language:English
Published: NLM (Medline) 2019
Subjects:
Online Access:http://hdl.handle.net/11499/30111
id ftpamukkaleuniv:oai:acikerisim.pau.edu.tr:11499/30111
record_format openpolar
spelling ftpamukkaleuniv:oai:acikerisim.pau.edu.tr:11499/30111 2023-05-15T16:04:56+02:00 The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE Çalışkan, Ahmet Çopur Çicek, A. Aydogan Ejder, N. Karagöz, A. Kirişci, Ö. Kılıç, S. orcid:0000-0002-1156-3787 2019 application/pdf http://hdl.handle.net/11499/30111 English eng NLM (Medline) 10.3855/jidc.11171 Uluslararası Hakemli Dergi 19722680 (ISSN) http://hdl.handle.net/11499/30111 13 7 634 639 Scopus WOS PubMed info:eu-repo/semantics/openAccess antibiotic sensitivity clonal outbreak PFGE Pulsed Field Gel Electrophoresis Article 2019 ftpamukkaleuniv 2020-11-08T10:04:32Z INTRODUCTION: Stenotrophomonas maltophilia, which is able to form a biofilm, has mostly been related to catheters when it is the agent in hospital infections; these infections generally present as bacteremia and pneumonia, which may progress with complications and result in death. METHODOLOGY: The study included 153 S. maltophilia strains isolated from clinical samples sent to our hospital laboratory between 1 January 2014 and 30 June 2018. The bacteria were identified and their antibiotic sensitivity was determined using the VITEK-2 automated system. PFGE (Pulsed Field Gel Electrophoresis): The strains isolated from 34 patient clinical samples and from 1 patient bedcover were taken for PFGE examination. RESULTS: The TMP/SXT and levofloxacin sensitivity of 153 S. maltophilia strains was examined. TMP/SXT resistance was determined to be 39% and levofloxacin resistance at 5%. Among 35 S. maltophilia strains, seven genotypes were identified using the PFGE method. While three strains showed a specific genotype profile, the other 32 were determined to consist of four clusters. The cluster rate was therefore 91.4% (32/35). CONCLUSIONS: There was a clonal relationship between the vast majority of the 35 S. maltophilia isolates, which suggests that there was a cross-contamination problem in the hospital. One strain (#4) was identified by dendrogram analysis showed a high rate of similarity to the other strains and was determined to be the common source of the cross-contamination. Copyright (c) 2019 Ahemr Caliksan, Aysegul Copur Cicek, Nebahat Aydogan Ejder, Alper Karagoz, Ozlem Kirisci, Selcuk Kilic. Article in Journal/Newspaper ejder Pamukkale University Repository
institution Open Polar
collection Pamukkale University Repository
op_collection_id ftpamukkaleuniv
language English
topic antibiotic sensitivity
clonal outbreak
PFGE
Pulsed Field Gel Electrophoresis
spellingShingle antibiotic sensitivity
clonal outbreak
PFGE
Pulsed Field Gel Electrophoresis
Çalışkan, Ahmet
Çopur Çicek, A.
Aydogan Ejder, N.
Karagöz, A.
Kirişci, Ö.
Kılıç, S.
The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
topic_facet antibiotic sensitivity
clonal outbreak
PFGE
Pulsed Field Gel Electrophoresis
description INTRODUCTION: Stenotrophomonas maltophilia, which is able to form a biofilm, has mostly been related to catheters when it is the agent in hospital infections; these infections generally present as bacteremia and pneumonia, which may progress with complications and result in death. METHODOLOGY: The study included 153 S. maltophilia strains isolated from clinical samples sent to our hospital laboratory between 1 January 2014 and 30 June 2018. The bacteria were identified and their antibiotic sensitivity was determined using the VITEK-2 automated system. PFGE (Pulsed Field Gel Electrophoresis): The strains isolated from 34 patient clinical samples and from 1 patient bedcover were taken for PFGE examination. RESULTS: The TMP/SXT and levofloxacin sensitivity of 153 S. maltophilia strains was examined. TMP/SXT resistance was determined to be 39% and levofloxacin resistance at 5%. Among 35 S. maltophilia strains, seven genotypes were identified using the PFGE method. While three strains showed a specific genotype profile, the other 32 were determined to consist of four clusters. The cluster rate was therefore 91.4% (32/35). CONCLUSIONS: There was a clonal relationship between the vast majority of the 35 S. maltophilia isolates, which suggests that there was a cross-contamination problem in the hospital. One strain (#4) was identified by dendrogram analysis showed a high rate of similarity to the other strains and was determined to be the common source of the cross-contamination. Copyright (c) 2019 Ahemr Caliksan, Aysegul Copur Cicek, Nebahat Aydogan Ejder, Alper Karagoz, Ozlem Kirisci, Selcuk Kilic.
author2 orcid:0000-0002-1156-3787
format Article in Journal/Newspaper
author Çalışkan, Ahmet
Çopur Çicek, A.
Aydogan Ejder, N.
Karagöz, A.
Kirişci, Ö.
Kılıç, S.
author_facet Çalışkan, Ahmet
Çopur Çicek, A.
Aydogan Ejder, N.
Karagöz, A.
Kirişci, Ö.
Kılıç, S.
author_sort Çalışkan, Ahmet
title The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
title_short The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
title_full The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
title_fullStr The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
title_full_unstemmed The Antibiotic sensitivity of Stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with PFGE
title_sort antibiotic sensitivity of stenotrophomonas maltophilia in a 5-year period and investigation of clonal outbreak with pfge
publisher NLM (Medline)
publishDate 2019
url http://hdl.handle.net/11499/30111
genre ejder
genre_facet ejder
op_relation 10.3855/jidc.11171
Uluslararası Hakemli Dergi
19722680 (ISSN)
http://hdl.handle.net/11499/30111
13
7
634
639
Scopus
WOS
PubMed
op_rights info:eu-repo/semantics/openAccess
_version_ 1766400555555487744