Narrative for Bioproject PRJNA623111
This Narrative is part of a collection used in publications focused on the microbial ecology of fjord sediment in the high Arctic, Svalbard. This paper took a genome-centric approach to uncover novel metabolic capabilities of the Acidobacteriota clade. Metagenomic data was coupled with amplicon sequ...
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ftosti:oai:osti.gov:1817654 2023-07-30T04:01:46+02:00 Narrative for Bioproject PRJNA623111 Buongiorno, Joy 2021-09-01 application/pdf http://www.osti.gov/servlets/purl/1817654 https://www.osti.gov/biblio/1817654 https://doi.org/10.25982/97146.7/1817654 unknown http://www.osti.gov/servlets/purl/1817654 https://www.osti.gov/biblio/1817654 https://doi.org/10.25982/97146.7/1817654 doi:10.25982/97146.7/1817654 59 BASIC BIOLOGICAL SCIENCES 2021 ftosti https://doi.org/10.25982/97146.7/1817654 2023-07-11T10:06:39Z This Narrative is part of a collection used in publications focused on the microbial ecology of fjord sediment in the high Arctic, Svalbard. This paper took a genome-centric approach to uncover novel metabolic capabilities of the Acidobacteriota clade. Metagenomic data was coupled with amplicon sequencing of 16S rRNA and dissimilatory sulfite reductase (dsrB) genes, and transcripts (available under NCBI-Genbank Bioproject PRJNA623111), and gene expression analyses of tetrathionate-amended microcosms. This Narrative contains the metagenomic assemblies that were constructed within KBase for reproducibility. These include: stnF metagenome assembly stnAB metagenome assembly stnAC metagenome assembly These metagenome assemblies served as the launching point for an additional publication focused on a different clade of bacteria (Buongiorno et al., 2020). Link to that Narrative landing page here. Please cite: Flieder, Mathias, Joy Buongiorno, Craig W. Herbold, Bela Hausmann, Thomas Rattei, Karen G. Lloyd, Alexander Loy, and Kenneth Wasmund. "Novel taxa of Acidobacteriota implicated in seafloor sulfur cycling." The ISME Journal (2021): 1-22. Other/Unknown Material Arctic Svalbard SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) Arctic Svalbard |
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SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) |
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59 BASIC BIOLOGICAL SCIENCES |
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59 BASIC BIOLOGICAL SCIENCES Buongiorno, Joy Narrative for Bioproject PRJNA623111 |
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59 BASIC BIOLOGICAL SCIENCES |
description |
This Narrative is part of a collection used in publications focused on the microbial ecology of fjord sediment in the high Arctic, Svalbard. This paper took a genome-centric approach to uncover novel metabolic capabilities of the Acidobacteriota clade. Metagenomic data was coupled with amplicon sequencing of 16S rRNA and dissimilatory sulfite reductase (dsrB) genes, and transcripts (available under NCBI-Genbank Bioproject PRJNA623111), and gene expression analyses of tetrathionate-amended microcosms. This Narrative contains the metagenomic assemblies that were constructed within KBase for reproducibility. These include: stnF metagenome assembly stnAB metagenome assembly stnAC metagenome assembly These metagenome assemblies served as the launching point for an additional publication focused on a different clade of bacteria (Buongiorno et al., 2020). Link to that Narrative landing page here. Please cite: Flieder, Mathias, Joy Buongiorno, Craig W. Herbold, Bela Hausmann, Thomas Rattei, Karen G. Lloyd, Alexander Loy, and Kenneth Wasmund. "Novel taxa of Acidobacteriota implicated in seafloor sulfur cycling." The ISME Journal (2021): 1-22. |
author |
Buongiorno, Joy |
author_facet |
Buongiorno, Joy |
author_sort |
Buongiorno, Joy |
title |
Narrative for Bioproject PRJNA623111 |
title_short |
Narrative for Bioproject PRJNA623111 |
title_full |
Narrative for Bioproject PRJNA623111 |
title_fullStr |
Narrative for Bioproject PRJNA623111 |
title_full_unstemmed |
Narrative for Bioproject PRJNA623111 |
title_sort |
narrative for bioproject prjna623111 |
publishDate |
2021 |
url |
http://www.osti.gov/servlets/purl/1817654 https://www.osti.gov/biblio/1817654 https://doi.org/10.25982/97146.7/1817654 |
geographic |
Arctic Svalbard |
geographic_facet |
Arctic Svalbard |
genre |
Arctic Svalbard |
genre_facet |
Arctic Svalbard |
op_relation |
http://www.osti.gov/servlets/purl/1817654 https://www.osti.gov/biblio/1817654 https://doi.org/10.25982/97146.7/1817654 doi:10.25982/97146.7/1817654 |
op_doi |
https://doi.org/10.25982/97146.7/1817654 |
_version_ |
1772812521123610624 |