Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States

This is the first study analyzing Pacific oyster microbiota in the Puget Sound estuarine system using a next-generation sequencing method. Taxonomic analysis indicated that Tenericutes, Chlamydiae , Proteobacteria , and Firmicutes were the most abundant phyla. Small numbers of operational taxonomic...

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Bibliographic Details
Published in:Genome Announcements
Main Authors: Li, Zhen, Wang, Leyi
Language:unknown
Published: 2021
Subjects:
60 APPLIED LIFE SCIENCES
Pacific
Crassostrea gigas
Pacific oyster
Online Access:http://www.osti.gov/servlets/purl/1629849
https://www.osti.gov/biblio/1629849
https://doi.org/10.1128/genomeA.00468-17
id ftosti:oai:osti.gov:1629849
record_format openpolar
spelling ftosti:oai:osti.gov:1629849 2023-07-30T04:03:02+02:00 Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States Li, Zhen Wang, Leyi 2021-07-07 application/pdf http://www.osti.gov/servlets/purl/1629849 https://www.osti.gov/biblio/1629849 https://doi.org/10.1128/genomeA.00468-17 unknown http://www.osti.gov/servlets/purl/1629849 https://www.osti.gov/biblio/1629849 https://doi.org/10.1128/genomeA.00468-17 doi:10.1128/genomeA.00468-17 60 APPLIED LIFE SCIENCES 2021 ftosti https://doi.org/10.1128/genomeA.00468-17 2023-07-11T09:43:01Z This is the first study analyzing Pacific oyster microbiota in the Puget Sound estuarine system using a next-generation sequencing method. Taxonomic analysis indicated that Tenericutes, Chlamydiae , Proteobacteria , and Firmicutes were the most abundant phyla. Small numbers of operational taxonomic units (OTUs) belonging to the Vibrio genus were detected in all the oyster microbiome samples. Other/Unknown Material Crassostrea gigas Pacific oyster SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) Pacific Genome Announcements 5 23
institution Open Polar
collection SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy)
op_collection_id ftosti
language unknown
topic 60 APPLIED LIFE SCIENCES
spellingShingle 60 APPLIED LIFE SCIENCES
Li, Zhen
Wang, Leyi
Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
topic_facet 60 APPLIED LIFE SCIENCES
description This is the first study analyzing Pacific oyster microbiota in the Puget Sound estuarine system using a next-generation sequencing method. Taxonomic analysis indicated that Tenericutes, Chlamydiae , Proteobacteria , and Firmicutes were the most abundant phyla. Small numbers of operational taxonomic units (OTUs) belonging to the Vibrio genus were detected in all the oyster microbiome samples.
author Li, Zhen
Wang, Leyi
author_facet Li, Zhen
Wang, Leyi
author_sort Li, Zhen
title Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
title_short Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
title_full Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
title_fullStr Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
title_full_unstemmed Metagenomic 16S rRNA Sequencing Analysis of Pacific Oyster (Crassostrea gigas) Microbiota from the Puget Sound Region in the United States
title_sort metagenomic 16s rrna sequencing analysis of pacific oyster (crassostrea gigas) microbiota from the puget sound region in the united states
publishDate 2021
url http://www.osti.gov/servlets/purl/1629849
https://www.osti.gov/biblio/1629849
https://doi.org/10.1128/genomeA.00468-17
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_relation http://www.osti.gov/servlets/purl/1629849
https://www.osti.gov/biblio/1629849
https://doi.org/10.1128/genomeA.00468-17
doi:10.1128/genomeA.00468-17
op_doi https://doi.org/10.1128/genomeA.00468-17
container_title Genome Announcements
container_volume 5
container_issue 23
_version_ 1772813963905466368

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