Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
© 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy so...
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Online Access: | http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 |
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ftosti:oai:osti.gov:1379032 2023-07-30T04:04:21+02:00 Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland Susanti, Dwi Johnson, Eric F. Lapidus, Alla Han, James Reddy, T. B. K. Pilay, Manoj Ivanova, Natalia N. Markowitz, Victor M. Woyke, Tanja Kyrpides, Nikos C. Mukhopadhyay, Biswarup 2023-06-26 application/pdf http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 unknown http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 doi:10.1186/s40793-015-0128-4 2023 ftosti https://doi.org/10.1186/s40793-015-0128-4 2023-07-11T09:20:41Z © 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy sources and reduces elemental sulfur to H 2 S. A metabolic construction derived from the draft genome identified putative pathways for peptide degradation and sulfur respiration in this archaeon. Existence of several hydrogenase genes in the genome supported previous findings that H 2 is produced during the growth of D. mobilis in the absence of sulfur. Interestingly, genes encoding glucose transport and utilization systems also exist in the D. mobilis genome though this archaeon does not utilize carbohydrate for growth. The draft genome of D. mobilis provides an additional mean for comparative genomic analysis of desulfurococci. In addition, our analysis on the Average Nucleotide Identity between D. mobilis and Desulfurococcus mucosus suggested that these two desulfurococci are two different strains of the same species. Other/Unknown Material Iceland SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) Hveravellir ENVELOPE(-19.546,-19.546,64.867,64.867) Standards in Genomic Sciences 11 1 |
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SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) |
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ftosti |
language |
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description |
© 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy sources and reduces elemental sulfur to H 2 S. A metabolic construction derived from the draft genome identified putative pathways for peptide degradation and sulfur respiration in this archaeon. Existence of several hydrogenase genes in the genome supported previous findings that H 2 is produced during the growth of D. mobilis in the absence of sulfur. Interestingly, genes encoding glucose transport and utilization systems also exist in the D. mobilis genome though this archaeon does not utilize carbohydrate for growth. The draft genome of D. mobilis provides an additional mean for comparative genomic analysis of desulfurococci. In addition, our analysis on the Average Nucleotide Identity between D. mobilis and Desulfurococcus mucosus suggested that these two desulfurococci are two different strains of the same species. |
author |
Susanti, Dwi Johnson, Eric F. Lapidus, Alla Han, James Reddy, T. B. K. Pilay, Manoj Ivanova, Natalia N. Markowitz, Victor M. Woyke, Tanja Kyrpides, Nikos C. Mukhopadhyay, Biswarup |
spellingShingle |
Susanti, Dwi Johnson, Eric F. Lapidus, Alla Han, James Reddy, T. B. K. Pilay, Manoj Ivanova, Natalia N. Markowitz, Victor M. Woyke, Tanja Kyrpides, Nikos C. Mukhopadhyay, Biswarup Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
author_facet |
Susanti, Dwi Johnson, Eric F. Lapidus, Alla Han, James Reddy, T. B. K. Pilay, Manoj Ivanova, Natalia N. Markowitz, Victor M. Woyke, Tanja Kyrpides, Nikos C. Mukhopadhyay, Biswarup |
author_sort |
Susanti, Dwi |
title |
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
title_short |
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
title_full |
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
title_fullStr |
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
title_full_unstemmed |
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland |
title_sort |
permanent draft genome sequence of desulfurococcus mobilis type strain dsm 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of hveravellir, iceland |
publishDate |
2023 |
url |
http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 |
long_lat |
ENVELOPE(-19.546,-19.546,64.867,64.867) |
geographic |
Hveravellir |
geographic_facet |
Hveravellir |
genre |
Iceland |
genre_facet |
Iceland |
op_relation |
http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 doi:10.1186/s40793-015-0128-4 |
op_doi |
https://doi.org/10.1186/s40793-015-0128-4 |
container_title |
Standards in Genomic Sciences |
container_volume |
11 |
container_issue |
1 |
_version_ |
1772815738847887360 |