Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland

© 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy so...

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Published in:Standards in Genomic Sciences
Main Authors: Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Pilay, Manoj, Ivanova, Natalia N., Markowitz, Victor M., Woyke, Tanja, Kyrpides, Nikos C., Mukhopadhyay, Biswarup
Language:unknown
Published: 2023
Subjects:
Online Access:http://www.osti.gov/servlets/purl/1379032
https://www.osti.gov/biblio/1379032
https://doi.org/10.1186/s40793-015-0128-4
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spelling ftosti:oai:osti.gov:1379032 2023-07-30T04:04:21+02:00 Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland Susanti, Dwi Johnson, Eric F. Lapidus, Alla Han, James Reddy, T. B. K. Pilay, Manoj Ivanova, Natalia N. Markowitz, Victor M. Woyke, Tanja Kyrpides, Nikos C. Mukhopadhyay, Biswarup 2023-06-26 application/pdf http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 unknown http://www.osti.gov/servlets/purl/1379032 https://www.osti.gov/biblio/1379032 https://doi.org/10.1186/s40793-015-0128-4 doi:10.1186/s40793-015-0128-4 2023 ftosti https://doi.org/10.1186/s40793-015-0128-4 2023-07-11T09:20:41Z © 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy sources and reduces elemental sulfur to H 2 S. A metabolic construction derived from the draft genome identified putative pathways for peptide degradation and sulfur respiration in this archaeon. Existence of several hydrogenase genes in the genome supported previous findings that H 2 is produced during the growth of D. mobilis in the absence of sulfur. Interestingly, genes encoding glucose transport and utilization systems also exist in the D. mobilis genome though this archaeon does not utilize carbohydrate for growth. The draft genome of D. mobilis provides an additional mean for comparative genomic analysis of desulfurococci. In addition, our analysis on the Average Nucleotide Identity between D. mobilis and Desulfurococcus mucosus suggested that these two desulfurococci are two different strains of the same species. Other/Unknown Material Iceland SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy) Hveravellir ENVELOPE(-19.546,-19.546,64.867,64.867) Standards in Genomic Sciences 11 1
institution Open Polar
collection SciTec Connect (Office of Scientific and Technical Information - OSTI, U.S. Department of Energy)
op_collection_id ftosti
language unknown
description © 2016 Susanti et al. This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy sources and reduces elemental sulfur to H 2 S. A metabolic construction derived from the draft genome identified putative pathways for peptide degradation and sulfur respiration in this archaeon. Existence of several hydrogenase genes in the genome supported previous findings that H 2 is produced during the growth of D. mobilis in the absence of sulfur. Interestingly, genes encoding glucose transport and utilization systems also exist in the D. mobilis genome though this archaeon does not utilize carbohydrate for growth. The draft genome of D. mobilis provides an additional mean for comparative genomic analysis of desulfurococci. In addition, our analysis on the Average Nucleotide Identity between D. mobilis and Desulfurococcus mucosus suggested that these two desulfurococci are two different strains of the same species.
author Susanti, Dwi
Johnson, Eric F.
Lapidus, Alla
Han, James
Reddy, T. B. K.
Pilay, Manoj
Ivanova, Natalia N.
Markowitz, Victor M.
Woyke, Tanja
Kyrpides, Nikos C.
Mukhopadhyay, Biswarup
spellingShingle Susanti, Dwi
Johnson, Eric F.
Lapidus, Alla
Han, James
Reddy, T. B. K.
Pilay, Manoj
Ivanova, Natalia N.
Markowitz, Victor M.
Woyke, Tanja
Kyrpides, Nikos C.
Mukhopadhyay, Biswarup
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
author_facet Susanti, Dwi
Johnson, Eric F.
Lapidus, Alla
Han, James
Reddy, T. B. K.
Pilay, Manoj
Ivanova, Natalia N.
Markowitz, Victor M.
Woyke, Tanja
Kyrpides, Nikos C.
Mukhopadhyay, Biswarup
author_sort Susanti, Dwi
title Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
title_short Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
title_full Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
title_fullStr Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
title_full_unstemmed Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
title_sort permanent draft genome sequence of desulfurococcus mobilis type strain dsm 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of hveravellir, iceland
publishDate 2023
url http://www.osti.gov/servlets/purl/1379032
https://www.osti.gov/biblio/1379032
https://doi.org/10.1186/s40793-015-0128-4
long_lat ENVELOPE(-19.546,-19.546,64.867,64.867)
geographic Hveravellir
geographic_facet Hveravellir
genre Iceland
genre_facet Iceland
op_relation http://www.osti.gov/servlets/purl/1379032
https://www.osti.gov/biblio/1379032
https://doi.org/10.1186/s40793-015-0128-4
doi:10.1186/s40793-015-0128-4
op_doi https://doi.org/10.1186/s40793-015-0128-4
container_title Standards in Genomic Sciences
container_volume 11
container_issue 1
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