Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet

Conservation strategies centered around species habitat protection rely on species’ dietary information. One species at the focal point of conservation efforts is the herbivorous grouse, the western capercaillie (Tetrao urogallus), which is an indicator species for forest biodiversity conservation....

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Published in:Environmental DNA
Main Authors: Chua, Physilia Y. S., Lammers, Youri, Menoni, Emmanuel, Ekrem, Torbjørn, Bohmann, Kristine, Boessenkool, Sanne, Alsos, Inger Greve
Format: Article in Journal/Newspaper
Language:English
Published: 2021
Subjects:
Online Access:http://hdl.handle.net/10852/86708
http://urn.nb.no/URN:NBN:no-89346
https://doi.org/10.1002/edn3.237
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spelling ftoslouniv:oai:www.duo.uio.no:10852/86708 2023-05-15T16:13:45+02:00 Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet Chua, Physilia Y. S. Lammers, Youri Menoni, Emmanuel Ekrem, Torbjørn Bohmann, Kristine Boessenkool, Sanne Alsos, Inger Greve 2021-07-20T12:53:36Z http://hdl.handle.net/10852/86708 http://urn.nb.no/URN:NBN:no-89346 https://doi.org/10.1002/edn3.237 EN eng http://urn.nb.no/URN:NBN:no-89346 Chua, Physilia Y. S. Lammers, Youri Menoni, Emmanuel Ekrem, Torbjørn Bohmann, Kristine Boessenkool, Sanne Alsos, Inger Greve . Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet. Environmental DNA. 2021 http://hdl.handle.net/10852/86708 1922232 info:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Environmental DNA&rft.volume=&rft.spage=&rft.date=2021 Environmental DNA 16 https://doi.org/10.1002/edn3.237 URN:NBN:no-89346 Fulltext https://www.duo.uio.no/bitstream/handle/10852/86708/2/edn3.237.pdf Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/ CC-BY 2637-4943 Journal article Tidsskriftartikkel Peer reviewed PublishedVersion 2021 ftoslouniv https://doi.org/10.1002/edn3.237 2021-08-11T22:31:36Z Conservation strategies centered around species habitat protection rely on species’ dietary information. One species at the focal point of conservation efforts is the herbivorous grouse, the western capercaillie (Tetrao urogallus), which is an indicator species for forest biodiversity conservation. Non-molecular means used to study their diet are time-consuming and at low taxonomic resolution. This delays the implementation of conservation strategies including resource protection due to uncertainty about its diet. Thus, limited knowledge on diet is hampering conservation efforts. Here, we use non-invasive environmental DNA (eDNA) metabarcoding on DNA extracted from faces to present the first large-scale molecular dietary analysis of capercaillies. Facal samples were collected from seven populations located in Norway (Finnmark, Troms, Trøndelag, Innlandet) and France (Vosges, Jura, Pyrenees) (n = 172). We detected 122 plant taxa belonging to 46 plant families of which 37.7% of the detected taxa could be identified at species level. The average dietary richness of each sample was 7 ± 5 SD taxa. The most frequently occurring plant groups with the highest relative read abundance (RRA) were trees and dwarf shrubs, in particular, Pinus and Vaccinium myrtillus, respectively. There was a difference in dietary composition (RRA) between samples collected from the different locations (adonis pseudo F5,86 = 11.01, r2 = 0.17, p = 0.001) and seasons (adonis pseudo F2,03 = 0.64, r2 = 0.01, p = 0.036). Dietary composition also differed between sexes at each location (adonis pseudo F1,47 = 2.77, r2 = 0.04, p = 0.024), although not significant for all data combined. In total, 35 taxa (36.8% of taxa recorded) were new capercaillie food items compared with existing knowledge from non-molecular means. The non-invasive molecular dietary analysis applied in this study provides new ecological information of capercaillies’ diet, improving our understanding of adequate habitat required for their conservation. Article in Journal/Newspaper Finnmark Finnmark Troms Universitet i Oslo: Digitale utgivelser ved UiO (DUO) Jura ENVELOPE(13.501,13.501,68.062,68.062) Norway Environmental DNA
institution Open Polar
collection Universitet i Oslo: Digitale utgivelser ved UiO (DUO)
op_collection_id ftoslouniv
language English
description Conservation strategies centered around species habitat protection rely on species’ dietary information. One species at the focal point of conservation efforts is the herbivorous grouse, the western capercaillie (Tetrao urogallus), which is an indicator species for forest biodiversity conservation. Non-molecular means used to study their diet are time-consuming and at low taxonomic resolution. This delays the implementation of conservation strategies including resource protection due to uncertainty about its diet. Thus, limited knowledge on diet is hampering conservation efforts. Here, we use non-invasive environmental DNA (eDNA) metabarcoding on DNA extracted from faces to present the first large-scale molecular dietary analysis of capercaillies. Facal samples were collected from seven populations located in Norway (Finnmark, Troms, Trøndelag, Innlandet) and France (Vosges, Jura, Pyrenees) (n = 172). We detected 122 plant taxa belonging to 46 plant families of which 37.7% of the detected taxa could be identified at species level. The average dietary richness of each sample was 7 ± 5 SD taxa. The most frequently occurring plant groups with the highest relative read abundance (RRA) were trees and dwarf shrubs, in particular, Pinus and Vaccinium myrtillus, respectively. There was a difference in dietary composition (RRA) between samples collected from the different locations (adonis pseudo F5,86 = 11.01, r2 = 0.17, p = 0.001) and seasons (adonis pseudo F2,03 = 0.64, r2 = 0.01, p = 0.036). Dietary composition also differed between sexes at each location (adonis pseudo F1,47 = 2.77, r2 = 0.04, p = 0.024), although not significant for all data combined. In total, 35 taxa (36.8% of taxa recorded) were new capercaillie food items compared with existing knowledge from non-molecular means. The non-invasive molecular dietary analysis applied in this study provides new ecological information of capercaillies’ diet, improving our understanding of adequate habitat required for their conservation.
format Article in Journal/Newspaper
author Chua, Physilia Y. S.
Lammers, Youri
Menoni, Emmanuel
Ekrem, Torbjørn
Bohmann, Kristine
Boessenkool, Sanne
Alsos, Inger Greve
spellingShingle Chua, Physilia Y. S.
Lammers, Youri
Menoni, Emmanuel
Ekrem, Torbjørn
Bohmann, Kristine
Boessenkool, Sanne
Alsos, Inger Greve
Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
author_facet Chua, Physilia Y. S.
Lammers, Youri
Menoni, Emmanuel
Ekrem, Torbjørn
Bohmann, Kristine
Boessenkool, Sanne
Alsos, Inger Greve
author_sort Chua, Physilia Y. S.
title Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
title_short Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
title_full Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
title_fullStr Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
title_full_unstemmed Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
title_sort molecular dietary analyses of western capercaillies (tetrao urogallus) reveal a diverse diet
publishDate 2021
url http://hdl.handle.net/10852/86708
http://urn.nb.no/URN:NBN:no-89346
https://doi.org/10.1002/edn3.237
long_lat ENVELOPE(13.501,13.501,68.062,68.062)
geographic Jura
Norway
geographic_facet Jura
Norway
genre Finnmark
Finnmark
Troms
genre_facet Finnmark
Finnmark
Troms
op_source 2637-4943
op_relation http://urn.nb.no/URN:NBN:no-89346
Chua, Physilia Y. S. Lammers, Youri Menoni, Emmanuel Ekrem, Torbjørn Bohmann, Kristine Boessenkool, Sanne Alsos, Inger Greve . Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet. Environmental DNA. 2021
http://hdl.handle.net/10852/86708
1922232
info:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Environmental DNA&rft.volume=&rft.spage=&rft.date=2021
Environmental DNA
16
https://doi.org/10.1002/edn3.237
URN:NBN:no-89346
Fulltext https://www.duo.uio.no/bitstream/handle/10852/86708/2/edn3.237.pdf
op_rights Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/
op_rightsnorm CC-BY
op_doi https://doi.org/10.1002/edn3.237
container_title Environmental DNA
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