Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis
Climate change has already led to the range expansion of warm-water plankton assemblages in the northeast Atlantic and the corresponding range contraction of colder-water species. The temperate copepod Calanus finmarchicus is predicted to shift farther northward into polar waters traditionally domin...
Published in: | Marine Ecology Progress Series |
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ftoslouniv:oai:www.duo.uio.no:10852/46090 2023-05-15T14:30:34+02:00 Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice 2015-08-28T11:03:37Z http://hdl.handle.net/10852/46090 http://urn.nb.no/URN:NBN:no-50289 https://doi.org/10.3354/meps11398 EN eng http://urn.nb.no/URN:NBN:no-50289 Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice . Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis. Marine Ecology Progress Series. 2015, 534, 79-93 http://hdl.handle.net/10852/46090 1260499 info:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Marine Ecology Progress Series&rft.volume=534&rft.spage=79&rft.date=2015 Marine Ecology Progress Series 534 79 93 http://dx.doi.org/10.3354/meps11398 URN:NBN:no-50289 Fulltext https://www.duo.uio.no/bitstream/handle/10852/46090/2/Smolina.pdf Attribution 3.0 Unported http://creativecommons.org/licenses/by/3.0/ CC-BY 0171-8630 Journal article Tidsskriftartikkel Peer reviewed PublishedVersion 2015 ftoslouniv https://doi.org/10.3354/meps11398 2020-06-21T08:48:47Z Climate change has already led to the range expansion of warm-water plankton assemblages in the northeast Atlantic and the corresponding range contraction of colder-water species. The temperate copepod Calanus finmarchicus is predicted to shift farther northward into polar waters traditionally dominated by the arctic copepod C. glacialis. To identify temperature-mediated changes in gene expression that may be critical for the thermal acclimation and resilience of the 2 Calanus spp., we conducted a whole transcriptome profiling using RNA-seq on an Ion Torrent platform. Transcriptome responses of C. finmarchicus and C. glacialis from Disko Bay, west Greenland, were investigated under realistic thermal stresses (at +5, +10 and +15°C) for 4 h and 6 d. C. finmarchicus showed a strong response to temperature and duration of stress, involving up-regulation of genes related to protein folding, transcription, translation and metabolism. In sharp contrast, C. glacialis displayed only low-magnitude changes in gene expression in response to temperature and duration of stress. Differences in the thermal responses of the 2 species, particularly the lack of thermal stress response in C. glacialis, are in line with laboratory and field observations and suggest a vulnerability of C. glacialis to climate change. Article in Journal/Newspaper Arctic copepod Arctic Calanus finmarchicus Climate change Disko Bay Greenland Northeast Atlantic Zooplankton Universitet i Oslo: Digitale utgivelser ved UiO (DUO) Arctic Greenland Marine Ecology Progress Series 534 79 93 |
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Open Polar |
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Universitet i Oslo: Digitale utgivelser ved UiO (DUO) |
op_collection_id |
ftoslouniv |
language |
English |
description |
Climate change has already led to the range expansion of warm-water plankton assemblages in the northeast Atlantic and the corresponding range contraction of colder-water species. The temperate copepod Calanus finmarchicus is predicted to shift farther northward into polar waters traditionally dominated by the arctic copepod C. glacialis. To identify temperature-mediated changes in gene expression that may be critical for the thermal acclimation and resilience of the 2 Calanus spp., we conducted a whole transcriptome profiling using RNA-seq on an Ion Torrent platform. Transcriptome responses of C. finmarchicus and C. glacialis from Disko Bay, west Greenland, were investigated under realistic thermal stresses (at +5, +10 and +15°C) for 4 h and 6 d. C. finmarchicus showed a strong response to temperature and duration of stress, involving up-regulation of genes related to protein folding, transcription, translation and metabolism. In sharp contrast, C. glacialis displayed only low-magnitude changes in gene expression in response to temperature and duration of stress. Differences in the thermal responses of the 2 species, particularly the lack of thermal stress response in C. glacialis, are in line with laboratory and field observations and suggest a vulnerability of C. glacialis to climate change. |
format |
Article in Journal/Newspaper |
author |
Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice |
spellingShingle |
Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
author_facet |
Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice |
author_sort |
Smolina, Irina |
title |
Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
title_short |
Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
title_full |
Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
title_fullStr |
Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
title_full_unstemmed |
Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis |
title_sort |
contrasting transcriptome response to thermal stress in two key zooplankton species, calanus finmarchicus and c. glacialis |
publishDate |
2015 |
url |
http://hdl.handle.net/10852/46090 http://urn.nb.no/URN:NBN:no-50289 https://doi.org/10.3354/meps11398 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic copepod Arctic Calanus finmarchicus Climate change Disko Bay Greenland Northeast Atlantic Zooplankton |
genre_facet |
Arctic copepod Arctic Calanus finmarchicus Climate change Disko Bay Greenland Northeast Atlantic Zooplankton |
op_source |
0171-8630 |
op_relation |
http://urn.nb.no/URN:NBN:no-50289 Smolina, Irina Kollias, Spyros Møller, Eva Friis Lindeque, Penelope K. Sundaram, Arvind Fernandes, Jorge Hoarau, Galice . Contrasting transcriptome response to thermal stress in two key zooplankton species, Calanus finmarchicus and C. glacialis. Marine Ecology Progress Series. 2015, 534, 79-93 http://hdl.handle.net/10852/46090 1260499 info:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Marine Ecology Progress Series&rft.volume=534&rft.spage=79&rft.date=2015 Marine Ecology Progress Series 534 79 93 http://dx.doi.org/10.3354/meps11398 URN:NBN:no-50289 Fulltext https://www.duo.uio.no/bitstream/handle/10852/46090/2/Smolina.pdf |
op_rights |
Attribution 3.0 Unported http://creativecommons.org/licenses/by/3.0/ |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.3354/meps11398 |
container_title |
Marine Ecology Progress Series |
container_volume |
534 |
container_start_page |
79 |
op_container_end_page |
93 |
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1766304387125215232 |