New insights into detecting alizarin from autofluorescence in marked glass eels

Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizarin-detecting technologie...

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Published in:Scientific Reports
Main Authors: GAILLARD, Melanie, PARLANTI, Edith, SOURZAC, Mahaut, COUILLAUD, Franck, GENEVOIS, Coralie, BOUTRY, Sebastien, RIGAUD, Christian, DAVERAT, Francoise
Format: Other/Unknown Material
Language:English
Published: 2022
Subjects:
Online Access:https://oskar-bordeaux.fr/handle/20.500.12278/170392
https://hdl.handle.net/20.500.12278/170392
https://doi.org/10.1038/s41598-022-18440-0
id ftoskarbordeaux:oai:oskar-bordeaux.fr:20.500.12278/170392
record_format openpolar
spelling ftoskarbordeaux:oai:oskar-bordeaux.fr:20.500.12278/170392 2023-05-15T13:27:48+02:00 New insights into detecting alizarin from autofluorescence in marked glass eels GAILLARD, Melanie PARLANTI, Edith SOURZAC, Mahaut COUILLAUD, Franck GENEVOIS, Coralie BOUTRY, Sebastien RIGAUD, Christian DAVERAT, Francoise 2022-09-26 https://oskar-bordeaux.fr/handle/20.500.12278/170392 https://hdl.handle.net/20.500.12278/170392 https://doi.org/10.1038/s41598-022-18440-0 EN eng 2045-2322 https://oskar-bordeaux.fr/handle/20.500.12278/170392 doi:10.1038/s41598-022-18440-0 Attribution 3.0 United States open http://creativecommons.org/licenses/by/3.0/us/ CC BY CC-BY Ecology Imaging Marine biology Microscopy Optical spectroscopy Sciences de l'environnement Article de revue 2022 ftoskarbordeaux https://doi.org/20.500.12278/170392 https://doi.org/10.1038/s41598-022-18440-0 2023-01-10T23:30:42Z Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizarin-detecting technologies on the living body and fins of European glass eels (Anguilla anguilla L.). The findings demonstrated that the control group had a high autofluorescence at alizarin and eelGFP maxima bands. With fluorescence reflectance imaging (FRI), the eel living body autofluorescence impeded the detection of the marked eels. In contrast with experimental excitation-emission-matrix (EEM) fluorescence analyses, 99% of the marked eels were correctly assigned to their group from fluorescence analyses of their fin cellular contents. With epifluorometry (EPI), 100% of the marked eels were detected with the caudal fin tips when excited at 450–490 nm wavelengths due to a weaker autofluorescence signal. EEM and FRI assays unveiled an average fluorescence quenching 60% and 44% of the marked group respectively, in the alizarin and eelGFP maxima bands. The fluorescence quenching observed is discussed. Results will benefit experimental design by examining autofluorescence effects on mark detection and the development of non-invasive detection methods in this critically endangered species. Other/Unknown Material Anguilla anguilla OSKAR Bordeaux (Open Science Knowledge ARchive) Scientific Reports 12 1
institution Open Polar
collection OSKAR Bordeaux (Open Science Knowledge ARchive)
op_collection_id ftoskarbordeaux
language English
topic Ecology
Imaging
Marine biology
Microscopy
Optical spectroscopy
Sciences de l'environnement
spellingShingle Ecology
Imaging
Marine biology
Microscopy
Optical spectroscopy
Sciences de l'environnement
GAILLARD, Melanie
PARLANTI, Edith
SOURZAC, Mahaut
COUILLAUD, Franck
GENEVOIS, Coralie
BOUTRY, Sebastien
RIGAUD, Christian
DAVERAT, Francoise
New insights into detecting alizarin from autofluorescence in marked glass eels
topic_facet Ecology
Imaging
Marine biology
Microscopy
Optical spectroscopy
Sciences de l'environnement
description Alizarin detection in fish fins is extensively employed because it is easy to use. However, in eels, the eelGFP fluorescent protein may impede the detection of the fluorescent markers in the eel tissues. The study tests the effectiveness of three of the most up-to-date alizarin-detecting technologies on the living body and fins of European glass eels (Anguilla anguilla L.). The findings demonstrated that the control group had a high autofluorescence at alizarin and eelGFP maxima bands. With fluorescence reflectance imaging (FRI), the eel living body autofluorescence impeded the detection of the marked eels. In contrast with experimental excitation-emission-matrix (EEM) fluorescence analyses, 99% of the marked eels were correctly assigned to their group from fluorescence analyses of their fin cellular contents. With epifluorometry (EPI), 100% of the marked eels were detected with the caudal fin tips when excited at 450–490 nm wavelengths due to a weaker autofluorescence signal. EEM and FRI assays unveiled an average fluorescence quenching 60% and 44% of the marked group respectively, in the alizarin and eelGFP maxima bands. The fluorescence quenching observed is discussed. Results will benefit experimental design by examining autofluorescence effects on mark detection and the development of non-invasive detection methods in this critically endangered species.
format Other/Unknown Material
author GAILLARD, Melanie
PARLANTI, Edith
SOURZAC, Mahaut
COUILLAUD, Franck
GENEVOIS, Coralie
BOUTRY, Sebastien
RIGAUD, Christian
DAVERAT, Francoise
author_facet GAILLARD, Melanie
PARLANTI, Edith
SOURZAC, Mahaut
COUILLAUD, Franck
GENEVOIS, Coralie
BOUTRY, Sebastien
RIGAUD, Christian
DAVERAT, Francoise
author_sort GAILLARD, Melanie
title New insights into detecting alizarin from autofluorescence in marked glass eels
title_short New insights into detecting alizarin from autofluorescence in marked glass eels
title_full New insights into detecting alizarin from autofluorescence in marked glass eels
title_fullStr New insights into detecting alizarin from autofluorescence in marked glass eels
title_full_unstemmed New insights into detecting alizarin from autofluorescence in marked glass eels
title_sort new insights into detecting alizarin from autofluorescence in marked glass eels
publishDate 2022
url https://oskar-bordeaux.fr/handle/20.500.12278/170392
https://hdl.handle.net/20.500.12278/170392
https://doi.org/10.1038/s41598-022-18440-0
genre Anguilla anguilla
genre_facet Anguilla anguilla
op_relation 2045-2322
https://oskar-bordeaux.fr/handle/20.500.12278/170392
doi:10.1038/s41598-022-18440-0
op_rights Attribution 3.0 United States
open
http://creativecommons.org/licenses/by/3.0/us/
CC BY
op_rightsnorm CC-BY
op_doi https://doi.org/20.500.12278/170392
https://doi.org/10.1038/s41598-022-18440-0
container_title Scientific Reports
container_volume 12
container_issue 1
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