Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy

The biogeochemical functioning of soils (e.g., soil carbon stabilization and nutrient cycling) is determined at the interfaces of specific soil structures (e.g., aggregates, particulate organic matter (POM) and organo‐mineral associations). With the growing accessibility of spectromicroscopic techni...

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Main Authors: Müller, Carsten W., Steffens, Markus, Buddenbaum, Henning
Other Authors: Vaarst, Mette, Roderick, Stephen
Format: Article in Journal/Newspaper
Language:English
Published: Burleigh Dodds Science Publishing Limited 2019
Subjects:
Online Access:https://orgprints.org/id/eprint/36386/
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spelling ftorgprints:oai:orgprints.org:36386 2023-05-15T17:57:50+02:00 Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy Müller, Carsten W. Steffens, Markus Buddenbaum, Henning Vaarst, Mette Roderick, Stephen 2019 application/pdf https://orgprints.org/id/eprint/36386/ en eng Burleigh Dodds Science Publishing Limited /id/eprint/36386/1/mueller-etal-2020-EurJSoilSci-p1-6_online-first.pdf Müller, Carsten W.; Steffens, Markus and Buddenbaum, Henning (2019) Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy. European Journal of Soil Science, online, pp. 1-6. urn:ISBN:978-1-78676-180-4 cc_by_nc_4 CC-BY-NC Specific methods Soil Journal paper NonPeerReviewed 2019 ftorgprints 2022-12-11T07:03:22Z The biogeochemical functioning of soils (e.g., soil carbon stabilization and nutrient cycling) is determined at the interfaces of specific soil structures (e.g., aggregates, particulate organic matter (POM) and organo‐mineral associations). With the growing accessibility of spectromicroscopic techniques, there is an increase in nano‐ to microscale analyses of biogeochemical interfaces at the process scale, reaching from the distribution of elements and isotopes to the localization of microorganisms. A widely used approach to study intact soil structures is the fixation and embedding of intact soil samples in resin and the subsequent analyses of soil cross‐sections using spectromicroscopic techniques. However, it is still challenging to link such microscale approaches to larger scales at which normally bulk soil analyses are conducted. Here we report on the use of laboratory imaging Vis–NIR spectroscopy on resin embedded soil sections and a procedure for supervised image classification to determine the microscale soil structure arrangement, including the quantification of soil organic matter fractions. This approach will help to upscale from microscale spectromicroscopic techniques to the centimetre and possibly pedon scale. Thus, we demonstrate a new approach to integrate microscale soil analyses into pedon‐scale conceptual and experimental approaches. Article in Journal/Newspaper permafrost Organic Eprints (Danish Research Centre for Organic Farming, DARCOF)
institution Open Polar
collection Organic Eprints (Danish Research Centre for Organic Farming, DARCOF)
op_collection_id ftorgprints
language English
topic Specific methods
Soil
spellingShingle Specific methods
Soil
Müller, Carsten W.
Steffens, Markus
Buddenbaum, Henning
Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
topic_facet Specific methods
Soil
description The biogeochemical functioning of soils (e.g., soil carbon stabilization and nutrient cycling) is determined at the interfaces of specific soil structures (e.g., aggregates, particulate organic matter (POM) and organo‐mineral associations). With the growing accessibility of spectromicroscopic techniques, there is an increase in nano‐ to microscale analyses of biogeochemical interfaces at the process scale, reaching from the distribution of elements and isotopes to the localization of microorganisms. A widely used approach to study intact soil structures is the fixation and embedding of intact soil samples in resin and the subsequent analyses of soil cross‐sections using spectromicroscopic techniques. However, it is still challenging to link such microscale approaches to larger scales at which normally bulk soil analyses are conducted. Here we report on the use of laboratory imaging Vis–NIR spectroscopy on resin embedded soil sections and a procedure for supervised image classification to determine the microscale soil structure arrangement, including the quantification of soil organic matter fractions. This approach will help to upscale from microscale spectromicroscopic techniques to the centimetre and possibly pedon scale. Thus, we demonstrate a new approach to integrate microscale soil analyses into pedon‐scale conceptual and experimental approaches.
author2 Vaarst, Mette
Roderick, Stephen
format Article in Journal/Newspaper
author Müller, Carsten W.
Steffens, Markus
Buddenbaum, Henning
author_facet Müller, Carsten W.
Steffens, Markus
Buddenbaum, Henning
author_sort Müller, Carsten W.
title Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
title_short Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
title_full Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
title_fullStr Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
title_full_unstemmed Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy
title_sort permafrost soil complexity evaluated by laboratory imaging vis‐nir spectroscopy
publisher Burleigh Dodds Science Publishing Limited
publishDate 2019
url https://orgprints.org/id/eprint/36386/
genre permafrost
genre_facet permafrost
op_relation /id/eprint/36386/1/mueller-etal-2020-EurJSoilSci-p1-6_online-first.pdf
Müller, Carsten W.; Steffens, Markus and Buddenbaum, Henning (2019) Permafrost soil complexity evaluated by laboratory imaging Vis‐NIR spectroscopy. European Journal of Soil Science, online, pp. 1-6.
urn:ISBN:978-1-78676-180-4
op_rights cc_by_nc_4
op_rightsnorm CC-BY-NC
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