Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period

peer reviewed Aim: Many species experienced population turnover and local extinction during the Late Pleistocene. In the case of megafauna, it remains challenging to disentangle climate change and the activities of Palaeolithic hunter-gatherers as the main cause. In contrast, the impact of humans on...

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Published in:Journal of Biogeography
Main Authors: Baca, Mateusz, Popović, Danijela, Lemanik, Anna, Bañuls-Cardona, Sandra, Conard, Nicholas J., Cuenca-Bescós, Gloria, Desclaux, Emmanuel, Fewlass, Helen, Garcia, Jesus T., Hadravova, Tereza, Heckel, Gerald, Horáček, Ivan, Knul, Monika Vlasta, Lebreton, Loïc, López-García, Juan Manuel, Luzi, Elisa, Marković, Zoran, Mauch Lenardić, Jadranka, Murelaga, Xabier, Noiret, Pierre, Petculescu, Alexandru, Popov, Vasil, Rhodes, Sara E., Ridush, Bogdan, Royer, Aurélien, Stewart, John R., Stojak, Joanna, Talamo, Sahra, Wang, Xuejing, Wójcik, Jan M., Nadachowski, Adam
Format: Article in Journal/Newspaper
Language:English
Published: John Wiley and Sons Inc 2023
Subjects:
Online Access:https://orbi.uliege.be/handle/2268/304670
https://orbi.uliege.be/bitstream/2268/304670/1/Journal%20of%20Biogeography%20-%202022%20-%20Baca%20-%20Ancient%20DNA%20reveals%20interstadials%20as%20a%20driver%20of%20common%20vole%20population%20dynamics.pdf
https://doi.org/10.1111/jbi.14521
id ftorbi:oai:orbi.ulg.ac.be:2268/304670
record_format openpolar
institution Open Polar
collection University of Liège: ORBi (Open Repository and Bibliography)
op_collection_id ftorbi
language English
topic habitat
Late Pleistocene
Microtus sp
mitochondrial DNA
paleoclimate
small mammals
Ecology
Evolution
Behavior and Systematics
Life sciences
Environmental sciences & ecology
Sciences du vivant
Sciences de l’environnement & écologie
spellingShingle habitat
Late Pleistocene
Microtus sp
mitochondrial DNA
paleoclimate
small mammals
Ecology
Evolution
Behavior and Systematics
Life sciences
Environmental sciences & ecology
Sciences du vivant
Sciences de l’environnement & écologie
Baca, Mateusz
Popović, Danijela
Lemanik, Anna
Bañuls-Cardona, Sandra
Conard, Nicholas J.
Cuenca-Bescós, Gloria
Desclaux, Emmanuel
Fewlass, Helen
Garcia, Jesus T.
Hadravova, Tereza
Heckel, Gerald
Horáček, Ivan
Knul, Monika Vlasta
Lebreton, Loïc
López-García, Juan Manuel
Luzi, Elisa
Marković, Zoran
Mauch Lenardić, Jadranka
Murelaga, Xabier
Noiret, Pierre
Petculescu, Alexandru
Popov, Vasil
Rhodes, Sara E.
Ridush, Bogdan
Royer, Aurélien
Stewart, John R.
Stojak, Joanna
Talamo, Sahra
Wang, Xuejing
Wójcik, Jan M.
Nadachowski, Adam
Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
topic_facet habitat
Late Pleistocene
Microtus sp
mitochondrial DNA
paleoclimate
small mammals
Ecology
Evolution
Behavior and Systematics
Life sciences
Environmental sciences & ecology
Sciences du vivant
Sciences de l’environnement & écologie
description peer reviewed Aim: Many species experienced population turnover and local extinction during the Late Pleistocene. In the case of megafauna, it remains challenging to disentangle climate change and the activities of Palaeolithic hunter-gatherers as the main cause. In contrast, the impact of humans on rodent populations is likely to be negligible. This study investigated which climatic and/or environmental factors affect the population dynamics of the common vole. This temperate rodent is widespread across Europe and was one of the most abundant small mammal species throughout the Late Pleistocene. Location: Europe. Taxon: Common vole (Microtus arvalis). Methods: We generated a dataset comprised of 4.2 kb long fragment of mitochondrial DNA (mtDNA) from 148 ancient and 51 modern specimens sampled from multiple localities across Europe and covering the last 60 thousand years (ka). We used Bayesian inference to reconstruct their phylogenetic relationships and to estimate the age of the specimens that were not directly dated. Results: We estimated the time to the most recent common ancestor of all last glacial and extant common vole lineages to be 90 ka ago and the divergence of the main mtDNA lineages present in extant populations to between 55 and 40 ka ago, which is earlier than most previous estimates. We detected several lineage turnovers in Europe during the period of high climate variability at the end of Marine Isotope Stage 3 (MIS 3; 57–29 ka ago) in addition to those found previously around the Pleistocene/Holocene transition. In contrast, data from the Western Carpathians suggest continuity throughout the Last Glacial Maximum (LGM) even at high latitudes. Main Conclusions: The main factor affecting the common vole populations during the last glacial period was the decrease in open habitat during the interstadials, whereas climate deterioration during the LGM had little impact on population dynamics. This suggests that the rapid environmental change rather than other factors was the major force shaping the ...
format Article in Journal/Newspaper
author Baca, Mateusz
Popović, Danijela
Lemanik, Anna
Bañuls-Cardona, Sandra
Conard, Nicholas J.
Cuenca-Bescós, Gloria
Desclaux, Emmanuel
Fewlass, Helen
Garcia, Jesus T.
Hadravova, Tereza
Heckel, Gerald
Horáček, Ivan
Knul, Monika Vlasta
Lebreton, Loïc
López-García, Juan Manuel
Luzi, Elisa
Marković, Zoran
Mauch Lenardić, Jadranka
Murelaga, Xabier
Noiret, Pierre
Petculescu, Alexandru
Popov, Vasil
Rhodes, Sara E.
Ridush, Bogdan
Royer, Aurélien
Stewart, John R.
Stojak, Joanna
Talamo, Sahra
Wang, Xuejing
Wójcik, Jan M.
Nadachowski, Adam
author_facet Baca, Mateusz
Popović, Danijela
Lemanik, Anna
Bañuls-Cardona, Sandra
Conard, Nicholas J.
Cuenca-Bescós, Gloria
Desclaux, Emmanuel
Fewlass, Helen
Garcia, Jesus T.
Hadravova, Tereza
Heckel, Gerald
Horáček, Ivan
Knul, Monika Vlasta
Lebreton, Loïc
López-García, Juan Manuel
Luzi, Elisa
Marković, Zoran
Mauch Lenardić, Jadranka
Murelaga, Xabier
Noiret, Pierre
Petculescu, Alexandru
Popov, Vasil
Rhodes, Sara E.
Ridush, Bogdan
Royer, Aurélien
Stewart, John R.
Stojak, Joanna
Talamo, Sahra
Wang, Xuejing
Wójcik, Jan M.
Nadachowski, Adam
author_sort Baca, Mateusz
title Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
title_short Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
title_full Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
title_fullStr Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
title_full_unstemmed Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period
title_sort ancient dna reveals interstadials as a driver of common vole population dynamics during the last glacial period
publisher John Wiley and Sons Inc
publishDate 2023
url https://orbi.uliege.be/handle/2268/304670
https://orbi.uliege.be/bitstream/2268/304670/1/Journal%20of%20Biogeography%20-%202022%20-%20Baca%20-%20Ancient%20DNA%20reveals%20interstadials%20as%20a%20driver%20of%20common%20vole%20population%20dynamics.pdf
https://doi.org/10.1111/jbi.14521
genre Common vole
Microtus arvalis
genre_facet Common vole
Microtus arvalis
op_source Journal of Biogeography, 50 (1), 183 - 196 (2023)
op_relation https://onlinelibrary.wiley.com/doi/pdf/10.1111/jbi.14521
urn:issn:0305-0270
urn:issn:1365-2699
https://orbi.uliege.be/handle/2268/304670
info:hdl:2268/304670
https://orbi.uliege.be/bitstream/2268/304670/1/Journal%20of%20Biogeography%20-%202022%20-%20Baca%20-%20Ancient%20DNA%20reveals%20interstadials%20as%20a%20driver%20of%20common%20vole%20population%20dynamics.pdf
doi:10.1111/jbi.14521
scopus-id:2-s2.0-85141843149
op_rights open access
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info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1111/jbi.14521
container_title Journal of Biogeography
container_volume 50
container_issue 1
container_start_page 183
op_container_end_page 196
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spelling ftorbi:oai:orbi.ulg.ac.be:2268/304670 2024-04-21T08:00:25+00:00 Ancient DNA reveals interstadials as a driver of common vole population dynamics during the last glacial period Baca, Mateusz Popović, Danijela Lemanik, Anna Bañuls-Cardona, Sandra Conard, Nicholas J. Cuenca-Bescós, Gloria Desclaux, Emmanuel Fewlass, Helen Garcia, Jesus T. Hadravova, Tereza Heckel, Gerald Horáček, Ivan Knul, Monika Vlasta Lebreton, Loïc López-García, Juan Manuel Luzi, Elisa Marković, Zoran Mauch Lenardić, Jadranka Murelaga, Xabier Noiret, Pierre Petculescu, Alexandru Popov, Vasil Rhodes, Sara E. Ridush, Bogdan Royer, Aurélien Stewart, John R. Stojak, Joanna Talamo, Sahra Wang, Xuejing Wójcik, Jan M. Nadachowski, Adam 2023 https://orbi.uliege.be/handle/2268/304670 https://orbi.uliege.be/bitstream/2268/304670/1/Journal%20of%20Biogeography%20-%202022%20-%20Baca%20-%20Ancient%20DNA%20reveals%20interstadials%20as%20a%20driver%20of%20common%20vole%20population%20dynamics.pdf https://doi.org/10.1111/jbi.14521 en eng John Wiley and Sons Inc https://onlinelibrary.wiley.com/doi/pdf/10.1111/jbi.14521 urn:issn:0305-0270 urn:issn:1365-2699 https://orbi.uliege.be/handle/2268/304670 info:hdl:2268/304670 https://orbi.uliege.be/bitstream/2268/304670/1/Journal%20of%20Biogeography%20-%202022%20-%20Baca%20-%20Ancient%20DNA%20reveals%20interstadials%20as%20a%20driver%20of%20common%20vole%20population%20dynamics.pdf doi:10.1111/jbi.14521 scopus-id:2-s2.0-85141843149 open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess Journal of Biogeography, 50 (1), 183 - 196 (2023) habitat Late Pleistocene Microtus sp mitochondrial DNA paleoclimate small mammals Ecology Evolution Behavior and Systematics Life sciences Environmental sciences & ecology Sciences du vivant Sciences de l’environnement & écologie journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2023 ftorbi https://doi.org/10.1111/jbi.14521 2024-03-27T14:58:46Z peer reviewed Aim: Many species experienced population turnover and local extinction during the Late Pleistocene. In the case of megafauna, it remains challenging to disentangle climate change and the activities of Palaeolithic hunter-gatherers as the main cause. In contrast, the impact of humans on rodent populations is likely to be negligible. This study investigated which climatic and/or environmental factors affect the population dynamics of the common vole. This temperate rodent is widespread across Europe and was one of the most abundant small mammal species throughout the Late Pleistocene. Location: Europe. Taxon: Common vole (Microtus arvalis). Methods: We generated a dataset comprised of 4.2 kb long fragment of mitochondrial DNA (mtDNA) from 148 ancient and 51 modern specimens sampled from multiple localities across Europe and covering the last 60 thousand years (ka). We used Bayesian inference to reconstruct their phylogenetic relationships and to estimate the age of the specimens that were not directly dated. Results: We estimated the time to the most recent common ancestor of all last glacial and extant common vole lineages to be 90 ka ago and the divergence of the main mtDNA lineages present in extant populations to between 55 and 40 ka ago, which is earlier than most previous estimates. We detected several lineage turnovers in Europe during the period of high climate variability at the end of Marine Isotope Stage 3 (MIS 3; 57–29 ka ago) in addition to those found previously around the Pleistocene/Holocene transition. In contrast, data from the Western Carpathians suggest continuity throughout the Last Glacial Maximum (LGM) even at high latitudes. Main Conclusions: The main factor affecting the common vole populations during the last glacial period was the decrease in open habitat during the interstadials, whereas climate deterioration during the LGM had little impact on population dynamics. This suggests that the rapid environmental change rather than other factors was the major force shaping the ... Article in Journal/Newspaper Common vole Microtus arvalis University of Liège: ORBi (Open Repository and Bibliography) Journal of Biogeography 50 1 183 196