How the Genus Eusirus amphipods evolved and speciated in the Antarctic
Antarctica has been subjected to different climatic changes in the past requiring the marine fauna to either adapt to novel environmental conditions, migrate to better conditions or become extinct. Currently, warming of Antarctica is happening at an unprecedented rate. Understanding how these organi...
Main Authors: | , , , , |
---|---|
Format: | Conference Object |
Language: | English |
Published: |
2020
|
Subjects: | |
Online Access: | https://orbi.uliege.be/handle/2268/252112 |
id |
ftorbi:oai:orbi.ulg.ac.be:2268/252112 |
---|---|
record_format |
openpolar |
spelling |
ftorbi:oai:orbi.ulg.ac.be:2268/252112 2024-04-21T07:51:57+00:00 How the Genus Eusirus amphipods evolved and speciated in the Antarctic Salabao, Louraine Frederich, Michel Lepoint, Gilles Verheye, Marie Schon, Isa 2020-08 https://orbi.uliege.be/handle/2268/252112 en eng https://orbi.uliege.be/handle/2268/252112 info:hdl:2268/252112 SCAR Online Conference 2020, 3-7 of August 2020 Amphipod Mitogenome Antarctica Life sciences Environmental sciences & ecology Zoology Genetics & genetic processes Sciences du vivant Sciences de l’environnement & écologie Zoologie Génétique & processus génétiques conference paper not in proceedings http://purl.org/coar/resource_type/c_18cp info:eu-repo/semantics/conferencePaper 2020 ftorbi 2024-03-27T14:50:51Z Antarctica has been subjected to different climatic changes in the past requiring the marine fauna to either adapt to novel environmental conditions, migrate to better conditions or become extinct. Currently, warming of Antarctica is happening at an unprecedented rate. Understanding how these organisms have managed to survive in the past will thus allow us to predict their possible responses to future climate changes. Here, the amphipod Genus Eusirus will be used as model organisms since these amphipods are very diverse and knowledge on their ecology and biogeography is still very limited. In this study, molecular, morphological and ecological data of Eusirus will be collected. Because no reference genome exists for this group, we will use a Next generation sequencing approach to obtain the complete mitochondrial genome (mitogenome) of these amphipods. Draft mitogenomes have been assembled and annotated from skim sequencing for two Eusirus species. From these mitogenomes, we designed primers for long-range PCRs to amplify the entire mitogenome in several pieces. Complete mitogenomes will allow us to estimate genetic divergence amongst different species and check for specific temperature adaptations of mitochondrial genes. The obtained mitogenome data will also provide better supported phylogenies for reconstructing evolutionary history of Eusirus. In order to get a better understanding of adaptive and/or non-adaptive processes which led to the current diversity of Eusirus amphipods, we will explore how morphological and ecological diversity are partitioned along the resulting phylogeny, concurrently with potential changes in lineage diversification through time. Conference Object Antarc* Antarctic Antarctica University of Liège: ORBi (Open Repository and Bibliography) |
institution |
Open Polar |
collection |
University of Liège: ORBi (Open Repository and Bibliography) |
op_collection_id |
ftorbi |
language |
English |
topic |
Amphipod Mitogenome Antarctica Life sciences Environmental sciences & ecology Zoology Genetics & genetic processes Sciences du vivant Sciences de l’environnement & écologie Zoologie Génétique & processus génétiques |
spellingShingle |
Amphipod Mitogenome Antarctica Life sciences Environmental sciences & ecology Zoology Genetics & genetic processes Sciences du vivant Sciences de l’environnement & écologie Zoologie Génétique & processus génétiques Salabao, Louraine Frederich, Michel Lepoint, Gilles Verheye, Marie Schon, Isa How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
topic_facet |
Amphipod Mitogenome Antarctica Life sciences Environmental sciences & ecology Zoology Genetics & genetic processes Sciences du vivant Sciences de l’environnement & écologie Zoologie Génétique & processus génétiques |
description |
Antarctica has been subjected to different climatic changes in the past requiring the marine fauna to either adapt to novel environmental conditions, migrate to better conditions or become extinct. Currently, warming of Antarctica is happening at an unprecedented rate. Understanding how these organisms have managed to survive in the past will thus allow us to predict their possible responses to future climate changes. Here, the amphipod Genus Eusirus will be used as model organisms since these amphipods are very diverse and knowledge on their ecology and biogeography is still very limited. In this study, molecular, morphological and ecological data of Eusirus will be collected. Because no reference genome exists for this group, we will use a Next generation sequencing approach to obtain the complete mitochondrial genome (mitogenome) of these amphipods. Draft mitogenomes have been assembled and annotated from skim sequencing for two Eusirus species. From these mitogenomes, we designed primers for long-range PCRs to amplify the entire mitogenome in several pieces. Complete mitogenomes will allow us to estimate genetic divergence amongst different species and check for specific temperature adaptations of mitochondrial genes. The obtained mitogenome data will also provide better supported phylogenies for reconstructing evolutionary history of Eusirus. In order to get a better understanding of adaptive and/or non-adaptive processes which led to the current diversity of Eusirus amphipods, we will explore how morphological and ecological diversity are partitioned along the resulting phylogeny, concurrently with potential changes in lineage diversification through time. |
format |
Conference Object |
author |
Salabao, Louraine Frederich, Michel Lepoint, Gilles Verheye, Marie Schon, Isa |
author_facet |
Salabao, Louraine Frederich, Michel Lepoint, Gilles Verheye, Marie Schon, Isa |
author_sort |
Salabao, Louraine |
title |
How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
title_short |
How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
title_full |
How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
title_fullStr |
How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
title_full_unstemmed |
How the Genus Eusirus amphipods evolved and speciated in the Antarctic |
title_sort |
how the genus eusirus amphipods evolved and speciated in the antarctic |
publishDate |
2020 |
url |
https://orbi.uliege.be/handle/2268/252112 |
genre |
Antarc* Antarctic Antarctica |
genre_facet |
Antarc* Antarctic Antarctica |
op_source |
SCAR Online Conference 2020, 3-7 of August 2020 |
op_relation |
https://orbi.uliege.be/handle/2268/252112 info:hdl:2268/252112 |
_version_ |
1796935229992075264 |