Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains

In the Sør Rondane Mountains (Dronning Maud Land, East Antarctica), cyanobacteria are mainly present in sheltered spots in rocky areas, supporting the importance of micro-topographic and -climatic conditions. Biofilms, crusts and gravels on granite and gneiss substrates were sampled in 2009-2010 nea...

Full description

Bibliographic Details
Main Authors: Savaglia, Valentina, Namsraev, Zorigto, Mano, Marie-José, Wilmotte, Annick
Other Authors: CIP - Centre d'Ingénierie des Protéines - ULiège
Format: Conference Object
Language:English
Published: 2018
Subjects:
Online Access:https://orbi.uliege.be/handle/2268/227175
https://orbi.uliege.be/bitstream/2268/227175/1/poster%20Davos2%20%283%29.pdf
id ftorbi:oai:orbi.ulg.ac.be:2268/227175
record_format openpolar
spelling ftorbi:oai:orbi.ulg.ac.be:2268/227175 2024-10-13T14:01:45+00:00 Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains Savaglia, Valentina Namsraev, Zorigto Mano, Marie-José Wilmotte, Annick CIP - Centre d'Ingénierie des Protéines - ULiège 2018 https://orbi.uliege.be/handle/2268/227175 https://orbi.uliege.be/bitstream/2268/227175/1/poster%20Davos2%20%283%29.pdf en eng https://orbi.uliege.be/handle/2268/227175 info:hdl:2268/227175 https://orbi.uliege.be/bitstream/2268/227175/1/poster%20Davos2%20%283%29.pdf open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess POLAR 2018 Conference - Where the Poles come together, from 19-06-2018 to 23-06-2018 Cyanobacteria Ice-free regions DGGE Antarctica Life sciences Microbiology Sciences du vivant Microbiologie conference poster not in proceedings http://purl.org/coar/resource_type/c_18co info:eu-repo/semantics/conferencePoster 2018 ftorbi 2024-09-27T07:01:34Z In the Sør Rondane Mountains (Dronning Maud Land, East Antarctica), cyanobacteria are mainly present in sheltered spots in rocky areas, supporting the importance of micro-topographic and -climatic conditions. Biofilms, crusts and gravels on granite and gneiss substrates were sampled in 2009-2010 near the Belgian Princess Elisabeth Station and their morphological (126 samples) and molecular diversity (26 samples) was assessed. A DNA extraction protocol was designed for the taxa with large polysaccharidic sheaths. Based on microscopy, crusts were the richest samples followed by gravels. The most diverse communities were found on the granites. Based on DGGE of 16S rRNA gene, 28 OTUs shared at least 97.5% of 16S rRNA similarity. OTUs’ richness varied between 1 and 5 per sample. A comparison of morphological and DGGE analyses showed that for most samples, the number of morphotypes was higher than the number of OTUs. However, both methods were congruent in defining the richest sites. The most frequently observed OTU was affiliated to Phormidium/Microcoleus sp. No OTU was common to all the 10 sites. The higher diversity on granite substrates (mainly big boulders) could be explained by higher stability of the underlaying rock and its ability to keep water on the surface, thus creating favorable conditions for development of organisms. Further insights will be given by the analysis of more samples with High-Throughput amplicon sequencing. Conference Object Antarc* Antarctica Dronning Maud Land East Antarctica University of Liège: ORBi (Open Repository and Bibliography) Dronning Maud Land East Antarctica Sør Rondane Mountains ENVELOPE(25.000,25.000,-72.000,-72.000) Sør-Rondane ENVELOPE(25.000,25.000,-72.000,-72.000)
institution Open Polar
collection University of Liège: ORBi (Open Repository and Bibliography)
op_collection_id ftorbi
language English
topic Cyanobacteria
Ice-free regions
DGGE
Antarctica
Life sciences
Microbiology
Sciences du vivant
Microbiologie
spellingShingle Cyanobacteria
Ice-free regions
DGGE
Antarctica
Life sciences
Microbiology
Sciences du vivant
Microbiologie
Savaglia, Valentina
Namsraev, Zorigto
Mano, Marie-José
Wilmotte, Annick
Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
topic_facet Cyanobacteria
Ice-free regions
DGGE
Antarctica
Life sciences
Microbiology
Sciences du vivant
Microbiologie
description In the Sør Rondane Mountains (Dronning Maud Land, East Antarctica), cyanobacteria are mainly present in sheltered spots in rocky areas, supporting the importance of micro-topographic and -climatic conditions. Biofilms, crusts and gravels on granite and gneiss substrates were sampled in 2009-2010 near the Belgian Princess Elisabeth Station and their morphological (126 samples) and molecular diversity (26 samples) was assessed. A DNA extraction protocol was designed for the taxa with large polysaccharidic sheaths. Based on microscopy, crusts were the richest samples followed by gravels. The most diverse communities were found on the granites. Based on DGGE of 16S rRNA gene, 28 OTUs shared at least 97.5% of 16S rRNA similarity. OTUs’ richness varied between 1 and 5 per sample. A comparison of morphological and DGGE analyses showed that for most samples, the number of morphotypes was higher than the number of OTUs. However, both methods were congruent in defining the richest sites. The most frequently observed OTU was affiliated to Phormidium/Microcoleus sp. No OTU was common to all the 10 sites. The higher diversity on granite substrates (mainly big boulders) could be explained by higher stability of the underlaying rock and its ability to keep water on the surface, thus creating favorable conditions for development of organisms. Further insights will be given by the analysis of more samples with High-Throughput amplicon sequencing.
author2 CIP - Centre d'Ingénierie des Protéines - ULiège
format Conference Object
author Savaglia, Valentina
Namsraev, Zorigto
Mano, Marie-José
Wilmotte, Annick
author_facet Savaglia, Valentina
Namsraev, Zorigto
Mano, Marie-José
Wilmotte, Annick
author_sort Savaglia, Valentina
title Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
title_short Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
title_full Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
title_fullStr Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
title_full_unstemmed Highest diversity of cyanobacterial on granite substrates in the Sør Rondane Mountains
title_sort highest diversity of cyanobacterial on granite substrates in the sør rondane mountains
publishDate 2018
url https://orbi.uliege.be/handle/2268/227175
https://orbi.uliege.be/bitstream/2268/227175/1/poster%20Davos2%20%283%29.pdf
long_lat ENVELOPE(25.000,25.000,-72.000,-72.000)
ENVELOPE(25.000,25.000,-72.000,-72.000)
geographic Dronning Maud Land
East Antarctica
Sør Rondane Mountains
Sør-Rondane
geographic_facet Dronning Maud Land
East Antarctica
Sør Rondane Mountains
Sør-Rondane
genre Antarc*
Antarctica
Dronning Maud Land
East Antarctica
genre_facet Antarc*
Antarctica
Dronning Maud Land
East Antarctica
op_source POLAR 2018 Conference - Where the Poles come together, from 19-06-2018 to 23-06-2018
op_relation https://orbi.uliege.be/handle/2268/227175
info:hdl:2268/227175
https://orbi.uliege.be/bitstream/2268/227175/1/poster%20Davos2%20%283%29.pdf
op_rights open access
http://purl.org/coar/access_right/c_abf2
info:eu-repo/semantics/openAccess
_version_ 1812812684703301632