Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica
peer reviewed The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sør Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supra...
Published in: | FEMS Microbiology Ecology |
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Language: | English |
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Blackwell Publishing
2016
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Online Access: | https://orbi.uliege.be/handle/2268/199400 https://doi.org/10.1093/femsec/fiw041 |
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ftorbi:oai:orbi.ulg.ac.be:2268/199400 2024-10-20T14:03:25+00:00 Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn FERNANDEZ CARAZO, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim CIP - Centre d'Ingénierie des Protéines - ULiège 2016 https://orbi.uliege.be/handle/2268/199400 https://doi.org/10.1093/femsec/fiw041 en eng Blackwell Publishing urn:issn:0168-6496 urn:issn:1574-6941 https://orbi.uliege.be/handle/2268/199400 info:hdl:2268/199400 doi:10.1093/femsec/fiw041 info:pmid:26936447 restricted access http://purl.org/coar/access_right/c_16ec info:eu-repo/semantics/restrictedAccess FEMS Microbiology Ecology, 92, fiw041 (2016) bacteria eukaryotes diversity Antarctica cyanobacteria green algae Life sciences Environmental sciences & ecology Microbiology Sciences du vivant Sciences de l’environnement & écologie Microbiologie journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2016 ftorbi https://doi.org/10.1093/femsec/fiw041 2024-09-27T07:02:01Z peer reviewed The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sør Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematodawere present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations. BELDIVA Article in Journal/Newspaper Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica University of Liège: ORBi (Open Repository and Bibliography) Antarctic Dronning Maud Land East Antarctica Sør Rondane Mountains ENVELOPE(25.000,25.000,-72.000,-72.000) Sør-Rondane ENVELOPE(25.000,25.000,-72.000,-72.000) FEMS Microbiology Ecology 92 6 fiw041 |
institution |
Open Polar |
collection |
University of Liège: ORBi (Open Repository and Bibliography) |
op_collection_id |
ftorbi |
language |
English |
topic |
bacteria eukaryotes diversity Antarctica cyanobacteria green algae Life sciences Environmental sciences & ecology Microbiology Sciences du vivant Sciences de l’environnement & écologie Microbiologie |
spellingShingle |
bacteria eukaryotes diversity Antarctica cyanobacteria green algae Life sciences Environmental sciences & ecology Microbiology Sciences du vivant Sciences de l’environnement & écologie Microbiologie Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn FERNANDEZ CARAZO, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
topic_facet |
bacteria eukaryotes diversity Antarctica cyanobacteria green algae Life sciences Environmental sciences & ecology Microbiology Sciences du vivant Sciences de l’environnement & écologie Microbiologie |
description |
peer reviewed The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sør Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematodawere present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations. BELDIVA |
author2 |
CIP - Centre d'Ingénierie des Protéines - ULiège |
format |
Article in Journal/Newspaper |
author |
Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn FERNANDEZ CARAZO, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim |
author_facet |
Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn FERNANDEZ CARAZO, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim |
author_sort |
Obbels, Dagmar |
title |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
title_short |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
title_full |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
title_fullStr |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
title_full_unstemmed |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 Sør Rondane Mountains, Dronning Maud Land, East Antarctica |
title_sort |
bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the 1 sør rondane mountains, dronning maud land, east antarctica |
publisher |
Blackwell Publishing |
publishDate |
2016 |
url |
https://orbi.uliege.be/handle/2268/199400 https://doi.org/10.1093/femsec/fiw041 |
long_lat |
ENVELOPE(25.000,25.000,-72.000,-72.000) ENVELOPE(25.000,25.000,-72.000,-72.000) |
geographic |
Antarctic Dronning Maud Land East Antarctica Sør Rondane Mountains Sør-Rondane |
geographic_facet |
Antarctic Dronning Maud Land East Antarctica Sør Rondane Mountains Sør-Rondane |
genre |
Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica |
genre_facet |
Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica |
op_source |
FEMS Microbiology Ecology, 92, fiw041 (2016) |
op_relation |
urn:issn:0168-6496 urn:issn:1574-6941 https://orbi.uliege.be/handle/2268/199400 info:hdl:2268/199400 doi:10.1093/femsec/fiw041 info:pmid:26936447 |
op_rights |
restricted access http://purl.org/coar/access_right/c_16ec info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1093/femsec/fiw041 |
container_title |
FEMS Microbiology Ecology |
container_volume |
92 |
container_issue |
6 |
container_start_page |
fiw041 |
_version_ |
1813447342037139456 |