Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase

peer reviewed Psychrophilic alkaline phosphatase (AP) from the Antarctic strain TAB5 was subjected to directed evolution in order to identify the key residues steering the enzyme's cold-adapted activity and stability. A round of random mutagenesis and further recombination yielded three thermos...

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Published in:Protein Engineering Design and Selection
Main Authors: Koutsioulis, D., Wang, E., Tzanodaskalaki, M., Nikiforaki, D., Deli, A., Feller, Georges, Heikinheimo, P., Bouriotis, V.
Format: Article in Journal/Newspaper
Language:English
Published: Oxford University Press 2008
Subjects:
Online Access:https://orbi.uliege.be/handle/2268/16631
https://orbi.uliege.be/bitstream/2268/16631/1/PEDS_2008_AP.pdf
https://doi.org/10.1093/protein/gzn009
id ftorbi:oai:orbi.ulg.ac.be:2268/16631
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spelling ftorbi:oai:orbi.ulg.ac.be:2268/16631 2024-10-13T14:03:16+00:00 Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase Koutsioulis, D. Wang, E. Tzanodaskalaki, M. Nikiforaki, D. Deli, A. Feller, Georges Heikinheimo, P. Bouriotis, V. 2008 https://orbi.uliege.be/handle/2268/16631 https://orbi.uliege.be/bitstream/2268/16631/1/PEDS_2008_AP.pdf https://doi.org/10.1093/protein/gzn009 en eng Oxford University Press urn:issn:1741-0126 urn:issn:1741-0134 https://orbi.uliege.be/handle/2268/16631 info:hdl:2268/16631 https://orbi.uliege.be/bitstream/2268/16631/1/PEDS_2008_AP.pdf doi:10.1093/protein/gzn009 info:pmid:18411226 open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess Protein Engineering, Design and Selection, 21 (5), 319-27 (2008) Alkaline Phosphatase/*chemistry/genetics Binding Sites Calorimetry Differential Scanning Dimerization Directed Molecular Evolution Kinetics Mutagenesis Site-Directed Mutation Protein Conformation Protein Denaturation Protein Engineering/*methods Protein Folding Recombination Genetic Temperature Thermodynamics Life sciences Biochemistry biophysics & molecular biology Sciences du vivant Biochimie biophysique & biologie moléculaire journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2008 ftorbi https://doi.org/10.1093/protein/gzn009 2024-09-27T07:02:04Z peer reviewed Psychrophilic alkaline phosphatase (AP) from the Antarctic strain TAB5 was subjected to directed evolution in order to identify the key residues steering the enzyme's cold-adapted activity and stability. A round of random mutagenesis and further recombination yielded three thermostable and six thermolabile variants of the TAB5 AP. All of the isolated variants were characterised by their residual activity after heat treatment, Michaelis-Menten kinetics, activation energy and microcalorimetric parameters of unfolding. In addition, they were modelled into the structure of the TAB5 AP. Mutations which affected the cold-adapted properties of the enzyme were all located close to the active site. The destabilised variants H135E and H135E/G149D had 2- and 3-fold higher kcat, respectively, than the wild-type enzyme. Wild-type AP has a complex heat-induced unfolding pattern while the mutated enzymes loose local unfolding transitions and have large shifts of the Tm values. Comparison of the wild-type and mutated TAB5 APs demonstrates that there is a delicate balance between the enzyme activity and stability and that it is possible to improve the activity and thermostability simultaneously as demonstrated in the case of the H135E/G149D variant compared to H135E. Article in Journal/Newspaper Antarc* Antarctic University of Liège: ORBi (Open Repository and Bibliography) Antarctic The Antarctic Protein Engineering Design and Selection 21 5 319 327
institution Open Polar
collection University of Liège: ORBi (Open Repository and Bibliography)
op_collection_id ftorbi
language English
topic Alkaline Phosphatase/*chemistry/genetics
Binding Sites
Calorimetry
Differential Scanning
Dimerization
Directed Molecular Evolution
Kinetics
Mutagenesis
Site-Directed
Mutation
Protein Conformation
Protein Denaturation
Protein Engineering/*methods
Protein Folding
Recombination
Genetic
Temperature
Thermodynamics
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
spellingShingle Alkaline Phosphatase/*chemistry/genetics
Binding Sites
Calorimetry
Differential Scanning
Dimerization
Directed Molecular Evolution
Kinetics
Mutagenesis
Site-Directed
Mutation
Protein Conformation
Protein Denaturation
Protein Engineering/*methods
Protein Folding
Recombination
Genetic
Temperature
Thermodynamics
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
Koutsioulis, D.
Wang, E.
Tzanodaskalaki, M.
Nikiforaki, D.
Deli, A.
Feller, Georges
Heikinheimo, P.
Bouriotis, V.
Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
topic_facet Alkaline Phosphatase/*chemistry/genetics
Binding Sites
Calorimetry
Differential Scanning
Dimerization
Directed Molecular Evolution
Kinetics
Mutagenesis
Site-Directed
Mutation
Protein Conformation
Protein Denaturation
Protein Engineering/*methods
Protein Folding
Recombination
Genetic
Temperature
Thermodynamics
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
description peer reviewed Psychrophilic alkaline phosphatase (AP) from the Antarctic strain TAB5 was subjected to directed evolution in order to identify the key residues steering the enzyme's cold-adapted activity and stability. A round of random mutagenesis and further recombination yielded three thermostable and six thermolabile variants of the TAB5 AP. All of the isolated variants were characterised by their residual activity after heat treatment, Michaelis-Menten kinetics, activation energy and microcalorimetric parameters of unfolding. In addition, they were modelled into the structure of the TAB5 AP. Mutations which affected the cold-adapted properties of the enzyme were all located close to the active site. The destabilised variants H135E and H135E/G149D had 2- and 3-fold higher kcat, respectively, than the wild-type enzyme. Wild-type AP has a complex heat-induced unfolding pattern while the mutated enzymes loose local unfolding transitions and have large shifts of the Tm values. Comparison of the wild-type and mutated TAB5 APs demonstrates that there is a delicate balance between the enzyme activity and stability and that it is possible to improve the activity and thermostability simultaneously as demonstrated in the case of the H135E/G149D variant compared to H135E.
format Article in Journal/Newspaper
author Koutsioulis, D.
Wang, E.
Tzanodaskalaki, M.
Nikiforaki, D.
Deli, A.
Feller, Georges
Heikinheimo, P.
Bouriotis, V.
author_facet Koutsioulis, D.
Wang, E.
Tzanodaskalaki, M.
Nikiforaki, D.
Deli, A.
Feller, Georges
Heikinheimo, P.
Bouriotis, V.
author_sort Koutsioulis, D.
title Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
title_short Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
title_full Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
title_fullStr Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
title_full_unstemmed Directed evolution on the cold adapted properties of TAB5 alkaline phosphatase
title_sort directed evolution on the cold adapted properties of tab5 alkaline phosphatase
publisher Oxford University Press
publishDate 2008
url https://orbi.uliege.be/handle/2268/16631
https://orbi.uliege.be/bitstream/2268/16631/1/PEDS_2008_AP.pdf
https://doi.org/10.1093/protein/gzn009
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Protein Engineering, Design and Selection, 21 (5), 319-27 (2008)
op_relation urn:issn:1741-0126
urn:issn:1741-0134
https://orbi.uliege.be/handle/2268/16631
info:hdl:2268/16631
https://orbi.uliege.be/bitstream/2268/16631/1/PEDS_2008_AP.pdf
doi:10.1093/protein/gzn009
info:pmid:18411226
op_rights open access
http://purl.org/coar/access_right/c_abf2
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1093/protein/gzn009
container_title Protein Engineering Design and Selection
container_volume 21
container_issue 5
container_start_page 319
op_container_end_page 327
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