Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice

peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abund...

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Published in:Aquatic Microbial Ecology
Main Authors: Kaartokallio, H., Søgaard, D.H., Norman, L., Rysgaard, S., Tison, Jean-Louis, Delille, Bruno, Thomas, D.
Format: Article in Journal/Newspaper
Language:English
Published: Inter-Research 2013
Subjects:
Online Access:https://orbi.uliege.be/handle/2268/164911
https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf
https://doi.org/10.3354/ame01667
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spelling ftorbi:oai:orbi.ulg.ac.be:2268/164911 2024-04-21T08:03:55+00:00 Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice Kaartokallio, H. Søgaard, D.H. Norman, L. Rysgaard, S. Tison, Jean-Louis Delille, Bruno Thomas, D. 2013-11 https://orbi.uliege.be/handle/2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf https://doi.org/10.3354/ame01667 en eng Inter-Research urn:issn:0948-3055 urn:issn:1616-1564 https://orbi.uliege.be/handle/2268/164911 info:hdl:2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf doi:10.3354/ame01667 scopus-id:2-s2.0-84889077933 open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess Aquatic Microbial Ecology, 71, 57-73 (2013-11) Physical chemical mathematical & earth Sciences Earth sciences & physical geography Physique chimie mathématiques & sciences de la terre Sciences de la terre & géographie physique journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2013 ftorbi https://doi.org/10.3354/ame01667 2024-03-27T14:59:32Z peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abundance and cell population properties (by flow cytometry) in subarctic sea ice in SW Greenland. Short-term temporal variability was moderate, and steep environmental gradients, typical for sea ice, were the main drivers of the variability in bacterial cell properties and activity. Low nucleic acid (LNA) bacteria, previously linked to oligotrophic ecotypes in marine habitats, were more abundant in the upper ice layers, whereas High nucleic acid (HNA) bacteria dominated in lower ice, where organic carbon was in high concentrations. Leucine incorporation was saturated at micro molar concentrations, as known from freshwater and marine biofilm systems. Leu:TdR ratios were high (up to >300) in lowermost ice layers and when they are compared to published respiration measurements these results suggest non-specific leucine incorporation. There was evidence of polyhydroxyalkanoate (PHA) containing bacteria in the sea ice, shown by brightly fluorescing intracellular inclusions after Nile Blue A staining. High leucine saturating concentrations coupled with the occurrence of PHA producing organisms further highlight the similarity of sea ice internal habitats to biofilm-like systems rather than to open-water systems. Article in Journal/Newspaper Greenland Sea ice Subarctic University of Liège: ORBi (Open Repository and Bibliography) Aquatic Microbial Ecology 71 1 57 73
institution Open Polar
collection University of Liège: ORBi (Open Repository and Bibliography)
op_collection_id ftorbi
language English
topic Physical
chemical
mathematical & earth Sciences
Earth sciences & physical geography
Physique
chimie
mathématiques & sciences de la terre
Sciences de la terre & géographie physique
spellingShingle Physical
chemical
mathematical & earth Sciences
Earth sciences & physical geography
Physique
chimie
mathématiques & sciences de la terre
Sciences de la terre & géographie physique
Kaartokallio, H.
Søgaard, D.H.
Norman, L.
Rysgaard, S.
Tison, Jean-Louis
Delille, Bruno
Thomas, D.
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
topic_facet Physical
chemical
mathematical & earth Sciences
Earth sciences & physical geography
Physique
chimie
mathématiques & sciences de la terre
Sciences de la terre & géographie physique
description peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abundance and cell population properties (by flow cytometry) in subarctic sea ice in SW Greenland. Short-term temporal variability was moderate, and steep environmental gradients, typical for sea ice, were the main drivers of the variability in bacterial cell properties and activity. Low nucleic acid (LNA) bacteria, previously linked to oligotrophic ecotypes in marine habitats, were more abundant in the upper ice layers, whereas High nucleic acid (HNA) bacteria dominated in lower ice, where organic carbon was in high concentrations. Leucine incorporation was saturated at micro molar concentrations, as known from freshwater and marine biofilm systems. Leu:TdR ratios were high (up to >300) in lowermost ice layers and when they are compared to published respiration measurements these results suggest non-specific leucine incorporation. There was evidence of polyhydroxyalkanoate (PHA) containing bacteria in the sea ice, shown by brightly fluorescing intracellular inclusions after Nile Blue A staining. High leucine saturating concentrations coupled with the occurrence of PHA producing organisms further highlight the similarity of sea ice internal habitats to biofilm-like systems rather than to open-water systems.
format Article in Journal/Newspaper
author Kaartokallio, H.
Søgaard, D.H.
Norman, L.
Rysgaard, S.
Tison, Jean-Louis
Delille, Bruno
Thomas, D.
author_facet Kaartokallio, H.
Søgaard, D.H.
Norman, L.
Rysgaard, S.
Tison, Jean-Louis
Delille, Bruno
Thomas, D.
author_sort Kaartokallio, H.
title Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
title_short Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
title_full Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
title_fullStr Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
title_full_unstemmed Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
title_sort short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
publisher Inter-Research
publishDate 2013
url https://orbi.uliege.be/handle/2268/164911
https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf
https://doi.org/10.3354/ame01667
genre Greenland
Sea ice
Subarctic
genre_facet Greenland
Sea ice
Subarctic
op_source Aquatic Microbial Ecology, 71, 57-73 (2013-11)
op_relation urn:issn:0948-3055
urn:issn:1616-1564
https://orbi.uliege.be/handle/2268/164911
info:hdl:2268/164911
https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf
doi:10.3354/ame01667
scopus-id:2-s2.0-84889077933
op_rights open access
http://purl.org/coar/access_right/c_abf2
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.3354/ame01667
container_title Aquatic Microbial Ecology
container_volume 71
container_issue 1
container_start_page 57
op_container_end_page 73
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