Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice
peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abund...
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Online Access: | https://orbi.uliege.be/handle/2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf https://doi.org/10.3354/ame01667 |
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ftorbi:oai:orbi.ulg.ac.be:2268/164911 2024-04-21T08:03:55+00:00 Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice Kaartokallio, H. Søgaard, D.H. Norman, L. Rysgaard, S. Tison, Jean-Louis Delille, Bruno Thomas, D. 2013-11 https://orbi.uliege.be/handle/2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf https://doi.org/10.3354/ame01667 en eng Inter-Research urn:issn:0948-3055 urn:issn:1616-1564 https://orbi.uliege.be/handle/2268/164911 info:hdl:2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf doi:10.3354/ame01667 scopus-id:2-s2.0-84889077933 open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess Aquatic Microbial Ecology, 71, 57-73 (2013-11) Physical chemical mathematical & earth Sciences Earth sciences & physical geography Physique chimie mathématiques & sciences de la terre Sciences de la terre & géographie physique journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2013 ftorbi https://doi.org/10.3354/ame01667 2024-03-27T14:59:32Z peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abundance and cell population properties (by flow cytometry) in subarctic sea ice in SW Greenland. Short-term temporal variability was moderate, and steep environmental gradients, typical for sea ice, were the main drivers of the variability in bacterial cell properties and activity. Low nucleic acid (LNA) bacteria, previously linked to oligotrophic ecotypes in marine habitats, were more abundant in the upper ice layers, whereas High nucleic acid (HNA) bacteria dominated in lower ice, where organic carbon was in high concentrations. Leucine incorporation was saturated at micro molar concentrations, as known from freshwater and marine biofilm systems. Leu:TdR ratios were high (up to >300) in lowermost ice layers and when they are compared to published respiration measurements these results suggest non-specific leucine incorporation. There was evidence of polyhydroxyalkanoate (PHA) containing bacteria in the sea ice, shown by brightly fluorescing intracellular inclusions after Nile Blue A staining. High leucine saturating concentrations coupled with the occurrence of PHA producing organisms further highlight the similarity of sea ice internal habitats to biofilm-like systems rather than to open-water systems. Article in Journal/Newspaper Greenland Sea ice Subarctic University of Liège: ORBi (Open Repository and Bibliography) Aquatic Microbial Ecology 71 1 57 73 |
institution |
Open Polar |
collection |
University of Liège: ORBi (Open Repository and Bibliography) |
op_collection_id |
ftorbi |
language |
English |
topic |
Physical chemical mathematical & earth Sciences Earth sciences & physical geography Physique chimie mathématiques & sciences de la terre Sciences de la terre & géographie physique |
spellingShingle |
Physical chemical mathematical & earth Sciences Earth sciences & physical geography Physique chimie mathématiques & sciences de la terre Sciences de la terre & géographie physique Kaartokallio, H. Søgaard, D.H. Norman, L. Rysgaard, S. Tison, Jean-Louis Delille, Bruno Thomas, D. Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
topic_facet |
Physical chemical mathematical & earth Sciences Earth sciences & physical geography Physique chimie mathématiques & sciences de la terre Sciences de la terre & géographie physique |
description |
peer reviewed Sea ice is a biome of immense size and provides a range of habitats for diverse microbial communities many of which are adapted to living at low temperatures and high salinities in brines. We measured simultaneous incorporation of thymidine (TdR) and leucine (Leu), bacterial cell abundance and cell population properties (by flow cytometry) in subarctic sea ice in SW Greenland. Short-term temporal variability was moderate, and steep environmental gradients, typical for sea ice, were the main drivers of the variability in bacterial cell properties and activity. Low nucleic acid (LNA) bacteria, previously linked to oligotrophic ecotypes in marine habitats, were more abundant in the upper ice layers, whereas High nucleic acid (HNA) bacteria dominated in lower ice, where organic carbon was in high concentrations. Leucine incorporation was saturated at micro molar concentrations, as known from freshwater and marine biofilm systems. Leu:TdR ratios were high (up to >300) in lowermost ice layers and when they are compared to published respiration measurements these results suggest non-specific leucine incorporation. There was evidence of polyhydroxyalkanoate (PHA) containing bacteria in the sea ice, shown by brightly fluorescing intracellular inclusions after Nile Blue A staining. High leucine saturating concentrations coupled with the occurrence of PHA producing organisms further highlight the similarity of sea ice internal habitats to biofilm-like systems rather than to open-water systems. |
format |
Article in Journal/Newspaper |
author |
Kaartokallio, H. Søgaard, D.H. Norman, L. Rysgaard, S. Tison, Jean-Louis Delille, Bruno Thomas, D. |
author_facet |
Kaartokallio, H. Søgaard, D.H. Norman, L. Rysgaard, S. Tison, Jean-Louis Delille, Bruno Thomas, D. |
author_sort |
Kaartokallio, H. |
title |
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
title_short |
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
title_full |
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
title_fullStr |
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
title_full_unstemmed |
Short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
title_sort |
short-term variability in bacterial abundance, cell properties, and incorporation of leucine and thymidine in subarctic sea ice |
publisher |
Inter-Research |
publishDate |
2013 |
url |
https://orbi.uliege.be/handle/2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf https://doi.org/10.3354/ame01667 |
genre |
Greenland Sea ice Subarctic |
genre_facet |
Greenland Sea ice Subarctic |
op_source |
Aquatic Microbial Ecology, 71, 57-73 (2013-11) |
op_relation |
urn:issn:0948-3055 urn:issn:1616-1564 https://orbi.uliege.be/handle/2268/164911 info:hdl:2268/164911 https://orbi.uliege.be/bitstream/2268/164911/1/Kaartokallio%20et%20al%202013.pdf doi:10.3354/ame01667 scopus-id:2-s2.0-84889077933 |
op_rights |
open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.3354/ame01667 |
container_title |
Aquatic Microbial Ecology |
container_volume |
71 |
container_issue |
1 |
container_start_page |
57 |
op_container_end_page |
73 |
_version_ |
1796943584399720448 |