Cold adaptation of a psychrophilic chitinase: a mutagenesis study

peer reviewed The gene encoding chitinase ArChiB from the Antarctic Arthrobacter sp. TAD20 has been expressed in Escherichia coli and the recombinant enzyme purified to homogeneity. In an effort to engineer cold-adapted biocatalysts through rational redesign to operate at elevated temperatures, we p...

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Published in:Protein Engineering Design and Selection
Main Authors: Mavromatis, K., Feller, Georges, Kokkinidis, M., Bouriotis, V.
Format: Article in Journal/Newspaper
Language:English
Published: Oxford Univ Press 2003
Subjects:
Online Access:https://orbi.uliege.be/handle/2268/15821
https://orbi.uliege.be/bitstream/2268/15821/1/ProtEng_Mavromatis_2003.pdf
https://doi.org/10.1093/protein/gzg069
id ftorbi:oai:orbi.ulg.ac.be:2268/15821
record_format openpolar
spelling ftorbi:oai:orbi.ulg.ac.be:2268/15821 2024-04-21T07:49:03+00:00 Cold adaptation of a psychrophilic chitinase: a mutagenesis study Mavromatis, K. Feller, Georges Kokkinidis, M. Bouriotis, V. 2003-07 https://orbi.uliege.be/handle/2268/15821 https://orbi.uliege.be/bitstream/2268/15821/1/ProtEng_Mavromatis_2003.pdf https://doi.org/10.1093/protein/gzg069 en eng Oxford Univ Press urn:issn:0269-2139 urn:issn:1460-213X https://orbi.uliege.be/handle/2268/15821 info:hdl:2268/15821 https://orbi.uliege.be/bitstream/2268/15821/1/ProtEng_Mavromatis_2003.pdf doi:10.1093/protein/gzg069 scopus-id:2-s2.0-0042379946 info:pmid:12915727 open access http://purl.org/coar/access_right/c_abf2 info:eu-repo/semantics/openAccess Protein Engineering, 16 (7), 497-503 (2003-07) chitinases cold adaptation mutagenesis psychrophilic enzyme thermostability Life sciences Biochemistry biophysics & molecular biology Sciences du vivant Biochimie biophysique & biologie moléculaire journal article http://purl.org/coar/resource_type/c_6501 info:eu-repo/semantics/article peer reviewed 2003 ftorbi https://doi.org/10.1093/protein/gzg069 2024-03-27T14:52:24Z peer reviewed The gene encoding chitinase ArChiB from the Antarctic Arthrobacter sp. TAD20 has been expressed in Escherichia coli and the recombinant enzyme purified to homogeneity. In an effort to engineer cold-adapted biocatalysts through rational redesign to operate at elevated temperatures, we performed several mutations aiming to increase the rigidity of the molecular edifice of the selected psychrophilic chitinase. The mutations were designed on the basis of a homology-based three-dimensional model of the enzyme, and included an attempt to introduce a salt bridge (mutant N198K) and replacements of selected Gly residues by either Pro (mutants G93P, G254P) or Gln (G406Q). Mutant N198K resulted in a more stable protein (DeltaT(m)=0.6degreesC). Mutant G93P exhibited a DeltaT(m) of 1.2degreesC, while mutants G254P and G406Q exhibited decreased stability. We conclude that the effect of mutating Gly residues on enzyme stability is rather complex and can only be understood in the context of the structural environment. Kinetic and spectroscopic analysis of these enzyme variants revealed that the kinetic parameters k(cat) and K-m have been significantly modified. Article in Journal/Newspaper Antarc* Antarctic University of Liège: ORBi (Open Repository and Bibliography) Protein Engineering Design and Selection 16 7 497 503
institution Open Polar
collection University of Liège: ORBi (Open Repository and Bibliography)
op_collection_id ftorbi
language English
topic chitinases
cold adaptation
mutagenesis
psychrophilic enzyme
thermostability
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
spellingShingle chitinases
cold adaptation
mutagenesis
psychrophilic enzyme
thermostability
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
Mavromatis, K.
Feller, Georges
Kokkinidis, M.
Bouriotis, V.
Cold adaptation of a psychrophilic chitinase: a mutagenesis study
topic_facet chitinases
cold adaptation
mutagenesis
psychrophilic enzyme
thermostability
Life sciences
Biochemistry
biophysics & molecular biology
Sciences du vivant
Biochimie
biophysique & biologie moléculaire
description peer reviewed The gene encoding chitinase ArChiB from the Antarctic Arthrobacter sp. TAD20 has been expressed in Escherichia coli and the recombinant enzyme purified to homogeneity. In an effort to engineer cold-adapted biocatalysts through rational redesign to operate at elevated temperatures, we performed several mutations aiming to increase the rigidity of the molecular edifice of the selected psychrophilic chitinase. The mutations were designed on the basis of a homology-based three-dimensional model of the enzyme, and included an attempt to introduce a salt bridge (mutant N198K) and replacements of selected Gly residues by either Pro (mutants G93P, G254P) or Gln (G406Q). Mutant N198K resulted in a more stable protein (DeltaT(m)=0.6degreesC). Mutant G93P exhibited a DeltaT(m) of 1.2degreesC, while mutants G254P and G406Q exhibited decreased stability. We conclude that the effect of mutating Gly residues on enzyme stability is rather complex and can only be understood in the context of the structural environment. Kinetic and spectroscopic analysis of these enzyme variants revealed that the kinetic parameters k(cat) and K-m have been significantly modified.
format Article in Journal/Newspaper
author Mavromatis, K.
Feller, Georges
Kokkinidis, M.
Bouriotis, V.
author_facet Mavromatis, K.
Feller, Georges
Kokkinidis, M.
Bouriotis, V.
author_sort Mavromatis, K.
title Cold adaptation of a psychrophilic chitinase: a mutagenesis study
title_short Cold adaptation of a psychrophilic chitinase: a mutagenesis study
title_full Cold adaptation of a psychrophilic chitinase: a mutagenesis study
title_fullStr Cold adaptation of a psychrophilic chitinase: a mutagenesis study
title_full_unstemmed Cold adaptation of a psychrophilic chitinase: a mutagenesis study
title_sort cold adaptation of a psychrophilic chitinase: a mutagenesis study
publisher Oxford Univ Press
publishDate 2003
url https://orbi.uliege.be/handle/2268/15821
https://orbi.uliege.be/bitstream/2268/15821/1/ProtEng_Mavromatis_2003.pdf
https://doi.org/10.1093/protein/gzg069
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Protein Engineering, 16 (7), 497-503 (2003-07)
op_relation urn:issn:0269-2139
urn:issn:1460-213X
https://orbi.uliege.be/handle/2268/15821
info:hdl:2268/15821
https://orbi.uliege.be/bitstream/2268/15821/1/ProtEng_Mavromatis_2003.pdf
doi:10.1093/protein/gzg069
scopus-id:2-s2.0-0042379946
info:pmid:12915727
op_rights open access
http://purl.org/coar/access_right/c_abf2
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1093/protein/gzg069
container_title Protein Engineering Design and Selection
container_volume 16
container_issue 7
container_start_page 497
op_container_end_page 503
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