Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland

Twenty-eight sponge specimens were collected at a shallow water hydrothermal vent site north of Iceland. Extracts were prepared and tested in vitro for cytotoxic activity, and eight of them were shown to be cytotoxic. A mass spectrometry (MS)-based metabolomics approach was used to determine the che...

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Published in:Marine Drugs
Main Authors: Einarsdóttir, Eydís, Magnúsdóttir, Manuela, Astarita, Giuseppe, Köck, Matthias, Ögmundsdóttir, Helga M., Þorsteinsdóttir, Margrét, Rapp, Hans, Omarsdottir, Sesselja, Paglia, Giuseppe
Other Authors: Lyfjafræðideild (HÍ), Faculty of Pharmaceutical Sciences (UI), Rannsóknarsetur í kerfislíffræði (HÍ), Center for Systems Biology (UI), Læknadeild (HÍ), Faculty of Medicine (UI), Heilbrigðisvísindasvið (HÍ), School of Health Sciences (UI), Verkfræði- og náttúruvísindasvið (HÍ), School of Engineering and Natural Sciences (UI), Háskóli Íslands, University of Iceland
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2017
Subjects:
Online Access:https://hdl.handle.net/20.500.11815/340
https://doi.org/10.3390/md15020052
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spelling ftopinvisindi:oai:opinvisindi.is:20.500.11815/340 2024-09-15T18:13:20+00:00 Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland Einarsdóttir, Eydís Magnúsdóttir, Manuela Astarita, Giuseppe Köck, Matthias Ögmundsdóttir, Helga M. Þorsteinsdóttir, Margrét Rapp, Hans Omarsdottir, Sesselja Paglia, Giuseppe Lyfjafræðideild (HÍ) Faculty of Pharmaceutical Sciences (UI) Rannsóknarsetur í kerfislíffræði (HÍ) Center for Systems Biology (UI) Læknadeild (HÍ) Faculty of Medicine (UI) Heilbrigðisvísindasvið (HÍ) School of Health Sciences (UI) Verkfræði- og náttúruvísindasvið (HÍ) School of Engineering and Natural Sciences (UI) Háskóli Íslands University of Iceland 2017-02-22 52 https://hdl.handle.net/20.500.11815/340 https://doi.org/10.3390/md15020052 en eng MDPI AG Marine Drugs;15(3) Einarsdottir E, Magnusdottir M, Astarita G, Köck M, Ögmundsdottir HM, Thorsteinsdottir M, Rapp HT, Omarsdottir S, Paglia G. Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland. Marine Drugs. 2017; 15(2):52. doi:10.3390/md15020052 1660-3397 https://hdl.handle.net/20.500.11815/340 Marine Drugs doi:10.3390/md15020052 info:eu-repo/semantics/openAccess Marine natural products Sponges Metabolomics Ion mobility Haliclona rosea Sjávarafurðir Svampdýr Efnaskipti info:eu-repo/semantics/article 2017 ftopinvisindi https://doi.org/20.500.11815/34010.3390/md15020052 2024-07-09T03:01:56Z Twenty-eight sponge specimens were collected at a shallow water hydrothermal vent site north of Iceland. Extracts were prepared and tested in vitro for cytotoxic activity, and eight of them were shown to be cytotoxic. A mass spectrometry (MS)-based metabolomics approach was used to determine the chemical composition of the extracts. This analysis highlighted clear differences in the metabolomes of three sponge specimens, and all of them were identified as Haliclona (Rhizoniera) rosea (Bowerbank, 1866). Therefore, these specimens were selected for further investigation. Haliclona rosea metabolomes contained a class of potential key compounds, the 3-alkyl pyridine alkaloids (3-APA) responsible for the cytotoxic activity of the fractions. Several 3-APA compounds were tentatively identified including haliclamines, cyclostellettamines, viscosalines and viscosamines. Among these compounds, cyclostellettamine P was tentatively identified for the first time by using ion mobility MS in time-aligned parallel (TAP) fragmentation mode. In this work, we show the potential of applying metabolomics strategies and in particular the utility of coupling ion mobility with MS for the molecular characterization of sponge specimens. The authors would like to thank Erlendur Bogason for his assistance in sample collection as well as being the "protector" of Strytan, the hydrothermal vent site. This project was funded by the Eimskip University Fund, The University of Iceland Research Fund, and the Icelandic Research Fund (grant no.: 110403021). Peer Reviewed Article in Journal/Newspaper Iceland Opin vísindi (Iceland) Marine Drugs 15 2 52
institution Open Polar
collection Opin vísindi (Iceland)
op_collection_id ftopinvisindi
language English
topic Marine natural products
Sponges
Metabolomics
Ion mobility
Haliclona rosea
Sjávarafurðir
Svampdýr
Efnaskipti
spellingShingle Marine natural products
Sponges
Metabolomics
Ion mobility
Haliclona rosea
Sjávarafurðir
Svampdýr
Efnaskipti
Einarsdóttir, Eydís
Magnúsdóttir, Manuela
Astarita, Giuseppe
Köck, Matthias
Ögmundsdóttir, Helga M.
Þorsteinsdóttir, Margrét
Rapp, Hans
Omarsdottir, Sesselja
Paglia, Giuseppe
Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
topic_facet Marine natural products
Sponges
Metabolomics
Ion mobility
Haliclona rosea
Sjávarafurðir
Svampdýr
Efnaskipti
description Twenty-eight sponge specimens were collected at a shallow water hydrothermal vent site north of Iceland. Extracts were prepared and tested in vitro for cytotoxic activity, and eight of them were shown to be cytotoxic. A mass spectrometry (MS)-based metabolomics approach was used to determine the chemical composition of the extracts. This analysis highlighted clear differences in the metabolomes of three sponge specimens, and all of them were identified as Haliclona (Rhizoniera) rosea (Bowerbank, 1866). Therefore, these specimens were selected for further investigation. Haliclona rosea metabolomes contained a class of potential key compounds, the 3-alkyl pyridine alkaloids (3-APA) responsible for the cytotoxic activity of the fractions. Several 3-APA compounds were tentatively identified including haliclamines, cyclostellettamines, viscosalines and viscosamines. Among these compounds, cyclostellettamine P was tentatively identified for the first time by using ion mobility MS in time-aligned parallel (TAP) fragmentation mode. In this work, we show the potential of applying metabolomics strategies and in particular the utility of coupling ion mobility with MS for the molecular characterization of sponge specimens. The authors would like to thank Erlendur Bogason for his assistance in sample collection as well as being the "protector" of Strytan, the hydrothermal vent site. This project was funded by the Eimskip University Fund, The University of Iceland Research Fund, and the Icelandic Research Fund (grant no.: 110403021). Peer Reviewed
author2 Lyfjafræðideild (HÍ)
Faculty of Pharmaceutical Sciences (UI)
Rannsóknarsetur í kerfislíffræði (HÍ)
Center for Systems Biology (UI)
Læknadeild (HÍ)
Faculty of Medicine (UI)
Heilbrigðisvísindasvið (HÍ)
School of Health Sciences (UI)
Verkfræði- og náttúruvísindasvið (HÍ)
School of Engineering and Natural Sciences (UI)
Háskóli Íslands
University of Iceland
format Article in Journal/Newspaper
author Einarsdóttir, Eydís
Magnúsdóttir, Manuela
Astarita, Giuseppe
Köck, Matthias
Ögmundsdóttir, Helga M.
Þorsteinsdóttir, Margrét
Rapp, Hans
Omarsdottir, Sesselja
Paglia, Giuseppe
author_facet Einarsdóttir, Eydís
Magnúsdóttir, Manuela
Astarita, Giuseppe
Köck, Matthias
Ögmundsdóttir, Helga M.
Þorsteinsdóttir, Margrét
Rapp, Hans
Omarsdottir, Sesselja
Paglia, Giuseppe
author_sort Einarsdóttir, Eydís
title Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
title_short Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
title_full Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
title_fullStr Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
title_full_unstemmed Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland
title_sort metabolic profiling as a screening tool for cytotoxic compounds: identification of 3-alkyl pyridine alkaloids from sponges collected at a shallow water hydrothermal vent site north of iceland
publisher MDPI AG
publishDate 2017
url https://hdl.handle.net/20.500.11815/340
https://doi.org/10.3390/md15020052
genre Iceland
genre_facet Iceland
op_relation Marine Drugs;15(3)
Einarsdottir E, Magnusdottir M, Astarita G, Köck M, Ögmundsdottir HM, Thorsteinsdottir M, Rapp HT, Omarsdottir S, Paglia G. Metabolic Profiling as a Screening Tool for Cytotoxic Compounds: Identification of 3-Alkyl Pyridine Alkaloids from Sponges Collected at a Shallow Water Hydrothermal Vent Site North of Iceland. Marine Drugs. 2017; 15(2):52. doi:10.3390/md15020052
1660-3397
https://hdl.handle.net/20.500.11815/340
Marine Drugs
doi:10.3390/md15020052
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/20.500.11815/34010.3390/md15020052
container_title Marine Drugs
container_volume 15
container_issue 2
container_start_page 52
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