First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany
Mergibacter septicus (M. septicus), previously known as Bisgaard Taxon 40, is a recently described species within the Pasteurellaceae family. In this study, we present a M. septicus strain isolated from a common tern (Sterna hirundo) chick that died just after fledging from the Banter See in Wilhelm...
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Online Access: | https://doi.org/10.3390/pathogens12091096 https://www.openagrar.de/receive/openagrar_mods_00089385 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00054595/SD2023316.pdf https://www.mdpi.com/2076-0817/12/9/1096 |
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ftopenagrar:oai:www.openagrar.de:openagrar_mods_00089385 2023-10-01T03:55:27+02:00 First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany Abdel-Glil, Mostafa Youssef Braune, Silke Bouwhuis, Sandra Sprague, Lisa D. 2023-08-28 https://doi.org/10.3390/pathogens12091096 https://www.openagrar.de/receive/openagrar_mods_00089385 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00054595/SD2023316.pdf https://www.mdpi.com/2076-0817/12/9/1096 eng eng Pathogens -- 2076-0817 -- 2695572-6 -- http://www.mdpi.com/journal/pathogens -- http://www.bibliothek.uni-regensburg.de/ezeit/?2695572 https://doi.org/10.3390/pathogens12091096 https://www.openagrar.de/receive/openagrar_mods_00089385 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00054595/SD2023316.pdf https://www.mdpi.com/2076-0817/12/9/1096 public https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess Text ddc:570 Mergibacter septicus -- common tern -- bird -- Germany -- genome -- taxonomy -- Pasteurella article Text 2023 ftopenagrar https://doi.org/10.3390/pathogens12091096 2023-09-03T23:07:13Z Mergibacter septicus (M. septicus), previously known as Bisgaard Taxon 40, is a recently described species within the Pasteurellaceae family. In this study, we present a M. septicus strain isolated from a common tern (Sterna hirundo) chick that died just after fledging from the Banter See in Wilhelmshaven, Germany. The recovered M. septicus strain underwent microbiological phenotypic characterization, followed by whole genome sequencing on Illumina and Nanopore platforms. Phenotypically, M. septicus 19Y0039 demonstrated resistance to colistin, cephalexin, clindamycin, oxacillin, and penicillin G. The genome analysis revealed a circular 1.8 Mbp chromosome without any extrachromosomal elements, containing 1690 coding DNA sequences. The majority of these coding genes were associated with translation, ribosomal structure and biogenesis, followed by RNA processing and modification, and transcription. Genetic analyses revealed that the German M. septicus strain 19Y0039 is related to the American strain M. septicus A25201T. Through BLAST alignment, twelve putative virulence genes previously identified in the M. septicus type strain A25201T were also found in the German strain. Additionally, 84 putative virulence genes distributed across nine categories, including immune modulation, effector delivery system, nutrition/metabolic factors, regulation, stress survival, adherence, biofilm, exotoxin, and motility, were also identified. Article in Journal/Newspaper Common tern Sterna hirundo OpenAgrar (OA) Pathogens 12 9 1096 |
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Text ddc:570 Mergibacter septicus -- common tern -- bird -- Germany -- genome -- taxonomy -- Pasteurella |
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Text ddc:570 Mergibacter septicus -- common tern -- bird -- Germany -- genome -- taxonomy -- Pasteurella Abdel-Glil, Mostafa Youssef Braune, Silke Bouwhuis, Sandra Sprague, Lisa D. First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
topic_facet |
Text ddc:570 Mergibacter septicus -- common tern -- bird -- Germany -- genome -- taxonomy -- Pasteurella |
description |
Mergibacter septicus (M. septicus), previously known as Bisgaard Taxon 40, is a recently described species within the Pasteurellaceae family. In this study, we present a M. septicus strain isolated from a common tern (Sterna hirundo) chick that died just after fledging from the Banter See in Wilhelmshaven, Germany. The recovered M. septicus strain underwent microbiological phenotypic characterization, followed by whole genome sequencing on Illumina and Nanopore platforms. Phenotypically, M. septicus 19Y0039 demonstrated resistance to colistin, cephalexin, clindamycin, oxacillin, and penicillin G. The genome analysis revealed a circular 1.8 Mbp chromosome without any extrachromosomal elements, containing 1690 coding DNA sequences. The majority of these coding genes were associated with translation, ribosomal structure and biogenesis, followed by RNA processing and modification, and transcription. Genetic analyses revealed that the German M. septicus strain 19Y0039 is related to the American strain M. septicus A25201T. Through BLAST alignment, twelve putative virulence genes previously identified in the M. septicus type strain A25201T were also found in the German strain. Additionally, 84 putative virulence genes distributed across nine categories, including immune modulation, effector delivery system, nutrition/metabolic factors, regulation, stress survival, adherence, biofilm, exotoxin, and motility, were also identified. |
format |
Article in Journal/Newspaper |
author |
Abdel-Glil, Mostafa Youssef Braune, Silke Bouwhuis, Sandra Sprague, Lisa D. |
author_facet |
Abdel-Glil, Mostafa Youssef Braune, Silke Bouwhuis, Sandra Sprague, Lisa D. |
author_sort |
Abdel-Glil, Mostafa Youssef |
title |
First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
title_short |
First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
title_full |
First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
title_fullStr |
First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
title_full_unstemmed |
First Description of Mergibacter septicus Isolated from a Common Tern (Sterna hirundo) in Germany |
title_sort |
first description of mergibacter septicus isolated from a common tern (sterna hirundo) in germany |
publishDate |
2023 |
url |
https://doi.org/10.3390/pathogens12091096 https://www.openagrar.de/receive/openagrar_mods_00089385 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00054595/SD2023316.pdf https://www.mdpi.com/2076-0817/12/9/1096 |
genre |
Common tern Sterna hirundo |
genre_facet |
Common tern Sterna hirundo |
op_relation |
Pathogens -- 2076-0817 -- 2695572-6 -- http://www.mdpi.com/journal/pathogens -- http://www.bibliothek.uni-regensburg.de/ezeit/?2695572 https://doi.org/10.3390/pathogens12091096 https://www.openagrar.de/receive/openagrar_mods_00089385 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00054595/SD2023316.pdf https://www.mdpi.com/2076-0817/12/9/1096 |
op_rights |
public https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.3390/pathogens12091096 |
container_title |
Pathogens |
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12 |
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9 |
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1096 |
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1778523921146970112 |