New Insights into Lymphocystis Disease Virus Genome Diversity
Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome seq...
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ftopenagrar:oai:www.openagrar.de:openagrar_mods_00084357 2024-09-15T18:25:23+00:00 New Insights into Lymphocystis Disease Virus Genome Diversity Benkaroun, Jessica Bergmann, Sven Römer-Oberdörfer, Angela Demircan, Menekse Didem Tamer, Cüneyt Kachh, Gayatri Rajendra Weidmann, Manfred 2022-12-08 https://doi.org/10.3390/v14122741 https://www.openagrar.de/receive/openagrar_mods_00084357 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00050602/SD2022482.pdf https://www.mdpi.com/1999-4915/14/12/2741 eng eng Viruses -- 1999-4915 -- 2516098-9 -- http://www.mdpi.com/journal/viruses -- https://www.ncbi.nlm.nih.gov/pmc/journals/1559/ -- http://www.bibliothek.uni-regensburg.de/ezeit/?2516098 https://doi.org/10.3390/v14122741 https://www.openagrar.de/receive/openagrar_mods_00084357 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00050602/SD2022482.pdf https://www.mdpi.com/1999-4915/14/12/2741 public https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess Text article ddc:570 lymphocystis disease virus -- LCDV1 -- whole genome -- nucleocytoplasmic large DNA virus -- demersal fish article Text doc-type:article 2022 ftopenagrar https://doi.org/10.3390/v14122741 2024-07-08T23:56:24Z Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome sequencing and phylogenetic analysis of LCDVs from wild fish from the North Sea and partial sequences from gilthead sea bream of an aquafarm located in the Aegean Sea in Turkey confirm that the LCDV1 genome at 100 kb is approximately half the size of the genomes of LCDV2-4. Since the fish species, of which LCDV1 was isolated, differ taxonomically at the order level, co-speciation can be excluded as the driver of the adaptation of the genome of this nucleocytoplasmic large DNA virus, but may represent an adaptation to the lifestyle of this demersal fish in the northeast Atlantic. Article in Journal/Newspaper Northeast Atlantic OpenAgrar (OA) Viruses 14 12 2741 |
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Text article ddc:570 lymphocystis disease virus -- LCDV1 -- whole genome -- nucleocytoplasmic large DNA virus -- demersal fish |
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Text article ddc:570 lymphocystis disease virus -- LCDV1 -- whole genome -- nucleocytoplasmic large DNA virus -- demersal fish Benkaroun, Jessica Bergmann, Sven Römer-Oberdörfer, Angela Demircan, Menekse Didem Tamer, Cüneyt Kachh, Gayatri Rajendra Weidmann, Manfred New Insights into Lymphocystis Disease Virus Genome Diversity |
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Text article ddc:570 lymphocystis disease virus -- LCDV1 -- whole genome -- nucleocytoplasmic large DNA virus -- demersal fish |
description |
Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome sequencing and phylogenetic analysis of LCDVs from wild fish from the North Sea and partial sequences from gilthead sea bream of an aquafarm located in the Aegean Sea in Turkey confirm that the LCDV1 genome at 100 kb is approximately half the size of the genomes of LCDV2-4. Since the fish species, of which LCDV1 was isolated, differ taxonomically at the order level, co-speciation can be excluded as the driver of the adaptation of the genome of this nucleocytoplasmic large DNA virus, but may represent an adaptation to the lifestyle of this demersal fish in the northeast Atlantic. |
format |
Article in Journal/Newspaper |
author |
Benkaroun, Jessica Bergmann, Sven Römer-Oberdörfer, Angela Demircan, Menekse Didem Tamer, Cüneyt Kachh, Gayatri Rajendra Weidmann, Manfred |
author_facet |
Benkaroun, Jessica Bergmann, Sven Römer-Oberdörfer, Angela Demircan, Menekse Didem Tamer, Cüneyt Kachh, Gayatri Rajendra Weidmann, Manfred |
author_sort |
Benkaroun, Jessica |
title |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_short |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_full |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_fullStr |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_full_unstemmed |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_sort |
new insights into lymphocystis disease virus genome diversity |
publishDate |
2022 |
url |
https://doi.org/10.3390/v14122741 https://www.openagrar.de/receive/openagrar_mods_00084357 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00050602/SD2022482.pdf https://www.mdpi.com/1999-4915/14/12/2741 |
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Northeast Atlantic |
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Northeast Atlantic |
op_relation |
Viruses -- 1999-4915 -- 2516098-9 -- http://www.mdpi.com/journal/viruses -- https://www.ncbi.nlm.nih.gov/pmc/journals/1559/ -- http://www.bibliothek.uni-regensburg.de/ezeit/?2516098 https://doi.org/10.3390/v14122741 https://www.openagrar.de/receive/openagrar_mods_00084357 https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00050602/SD2022482.pdf https://www.mdpi.com/1999-4915/14/12/2741 |
op_rights |
public https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.3390/v14122741 |
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