Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea

A taxonomic study was conducted on strain soj2014T, which was isolated from the surface water of a polynya in the Antarctic Sea. Comparative 16S rRNA gene sequence analysis showed that strain soj2014T belongs to the family Kiloniellaceae and is closely related to Kiloniella spongiae MEBiC09566T, ‘ K...

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Published in:International Journal of Systematic and Evolutionary Microbiology
Main Authors: Si, Ok-Ja, Yang, Hye-Young, Hwang, Chung Yeon, Kim, So-Jeong, Choi, Sun-Bin, Kim, Jong-Geol, Jung, Man-Young, Kim, Song-Gun, Roh, Seong Woon, Rhee, Sung-Keun
Format: Article in Journal/Newspaper
Language:English
Published: Microbiology Society 2017
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Online Access:https://oceanrep.geomar.de/id/eprint/39274/
https://oceanrep.geomar.de/id/eprint/39274/1/Si.pdf
https://doi.org/10.1099/ijsem.0.001968
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spelling ftoceanrep:oai:oceanrep.geomar.de:39274 2023-05-15T13:24:07+02:00 Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea Si, Ok-Ja Yang, Hye-Young Hwang, Chung Yeon Kim, So-Jeong Choi, Sun-Bin Kim, Jong-Geol Jung, Man-Young Kim, Song-Gun Roh, Seong Woon Rhee, Sung-Keun 2017 text https://oceanrep.geomar.de/id/eprint/39274/ https://oceanrep.geomar.de/id/eprint/39274/1/Si.pdf https://doi.org/10.1099/ijsem.0.001968 en eng Microbiology Society https://oceanrep.geomar.de/id/eprint/39274/1/Si.pdf Si, O. J., Yang, H. Y., Hwang, C. Y., Kim, S. J., Choi, S. B., Kim, J. G., Jung, M. Y., Kim, S. G., Roh, S. W. and Rhee, S. K. (2017) Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea. International Journal of Systematic and Evolutionary Microbiology, 67 (7). pp. 2397-2402. DOI 10.1099/ijsem.0.001968 <https://doi.org/10.1099/ijsem.0.001968>. doi:10.1099/ijsem.0.001968 info:eu-repo/semantics/restrictedAccess Article PeerReviewed 2017 ftoceanrep https://doi.org/10.1099/ijsem.0.001968 2023-04-07T15:35:04Z A taxonomic study was conducted on strain soj2014T, which was isolated from the surface water of a polynya in the Antarctic Sea. Comparative 16S rRNA gene sequence analysis showed that strain soj2014T belongs to the family Kiloniellaceae and is closely related to Kiloniella spongiae MEBiC09566T, ‘ Kiloniella litopenaei ’ P1-1T and Kiloniella laminariae LD81T (98.0 %, 97.8 % and 96.2 % 16S rRNA gene sequence similarity, respectively). The DNA–DNA hybridization values between strain soj2014T and closely related strains were below 28.6 %. The G+C content of the genomic DNA of strain soj2014T was 45.5 mol%. The predominant cellular fatty acids were summed feature 8 (composed of C18 : 1ω6c/C18 : 1ω7c, 57.0 %) and summed feature 3 (composed of C16 : 1ω6c/C16 : 1ω7c, 23.5 %). Strain soj2014T was Gram-stain-negative, slightly curved, spiral-shaped, and motile with a single polar flagellum. The strain grew at 0–30 °C (optimum, 25 °C), in 1.5–5.1 % (w/v) NaCl (optimum, 2.1–2.4 %) and at pH 5.5–9.5 (optimum, 7.5–8.0). It also had differential carbohydrate utilization traits and enzyme activities compared with closely related strains. Based on these phylogenetic, phenotypic and chemotaxonomic analyses, strain soj2014T represents a distinct species, separable from the reference strains, and is, therefore, proposed as a novel species, Kiloniella antarctica sp. nov. The type strain is soj2014T (=KCTC 42186T=JCM 30386T). Article in Journal/Newspaper Amundsen Sea Antarc* Antarctic Antarctica OceanRep (GEOMAR Helmholtz Centre für Ocean Research Kiel) Amundsen Sea Antarctic The Antarctic International Journal of Systematic and Evolutionary Microbiology 67 7 2397 2402
institution Open Polar
collection OceanRep (GEOMAR Helmholtz Centre für Ocean Research Kiel)
op_collection_id ftoceanrep
language English
description A taxonomic study was conducted on strain soj2014T, which was isolated from the surface water of a polynya in the Antarctic Sea. Comparative 16S rRNA gene sequence analysis showed that strain soj2014T belongs to the family Kiloniellaceae and is closely related to Kiloniella spongiae MEBiC09566T, ‘ Kiloniella litopenaei ’ P1-1T and Kiloniella laminariae LD81T (98.0 %, 97.8 % and 96.2 % 16S rRNA gene sequence similarity, respectively). The DNA–DNA hybridization values between strain soj2014T and closely related strains were below 28.6 %. The G+C content of the genomic DNA of strain soj2014T was 45.5 mol%. The predominant cellular fatty acids were summed feature 8 (composed of C18 : 1ω6c/C18 : 1ω7c, 57.0 %) and summed feature 3 (composed of C16 : 1ω6c/C16 : 1ω7c, 23.5 %). Strain soj2014T was Gram-stain-negative, slightly curved, spiral-shaped, and motile with a single polar flagellum. The strain grew at 0–30 °C (optimum, 25 °C), in 1.5–5.1 % (w/v) NaCl (optimum, 2.1–2.4 %) and at pH 5.5–9.5 (optimum, 7.5–8.0). It also had differential carbohydrate utilization traits and enzyme activities compared with closely related strains. Based on these phylogenetic, phenotypic and chemotaxonomic analyses, strain soj2014T represents a distinct species, separable from the reference strains, and is, therefore, proposed as a novel species, Kiloniella antarctica sp. nov. The type strain is soj2014T (=KCTC 42186T=JCM 30386T).
format Article in Journal/Newspaper
author Si, Ok-Ja
Yang, Hye-Young
Hwang, Chung Yeon
Kim, So-Jeong
Choi, Sun-Bin
Kim, Jong-Geol
Jung, Man-Young
Kim, Song-Gun
Roh, Seong Woon
Rhee, Sung-Keun
spellingShingle Si, Ok-Ja
Yang, Hye-Young
Hwang, Chung Yeon
Kim, So-Jeong
Choi, Sun-Bin
Kim, Jong-Geol
Jung, Man-Young
Kim, Song-Gun
Roh, Seong Woon
Rhee, Sung-Keun
Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
author_facet Si, Ok-Ja
Yang, Hye-Young
Hwang, Chung Yeon
Kim, So-Jeong
Choi, Sun-Bin
Kim, Jong-Geol
Jung, Man-Young
Kim, Song-Gun
Roh, Seong Woon
Rhee, Sung-Keun
author_sort Si, Ok-Ja
title Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
title_short Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
title_full Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
title_fullStr Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
title_full_unstemmed Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea
title_sort kiloniella antarctica sp. nov., isolated from a polynya of amundsen sea in western antarctic sea
publisher Microbiology Society
publishDate 2017
url https://oceanrep.geomar.de/id/eprint/39274/
https://oceanrep.geomar.de/id/eprint/39274/1/Si.pdf
https://doi.org/10.1099/ijsem.0.001968
geographic Amundsen Sea
Antarctic
The Antarctic
geographic_facet Amundsen Sea
Antarctic
The Antarctic
genre Amundsen Sea
Antarc*
Antarctic
Antarctica
genre_facet Amundsen Sea
Antarc*
Antarctic
Antarctica
op_relation https://oceanrep.geomar.de/id/eprint/39274/1/Si.pdf
Si, O. J., Yang, H. Y., Hwang, C. Y., Kim, S. J., Choi, S. B., Kim, J. G., Jung, M. Y., Kim, S. G., Roh, S. W. and Rhee, S. K. (2017) Kiloniella antarctica sp. nov., isolated from a polynya of Amundsen Sea in Western Antarctic Sea. International Journal of Systematic and Evolutionary Microbiology, 67 (7). pp. 2397-2402. DOI 10.1099/ijsem.0.001968 <https://doi.org/10.1099/ijsem.0.001968>.
doi:10.1099/ijsem.0.001968
op_rights info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1099/ijsem.0.001968
container_title International Journal of Systematic and Evolutionary Microbiology
container_volume 67
container_issue 7
container_start_page 2397
op_container_end_page 2402
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