Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing

Protists in the central Arctic Ocean are adapted to the harsh environmental conditions of its various habitats. During the Polarstern cruise ARK-XXVI/3 in 2011, at one sea-ice station, large aggregates accumulated at the bottom of the melt ponds. In this study, the protist assemblages of the bottom...

Full description

Bibliographic Details
Published in:Polar Research
Main Authors: Kilias, Estelle Silvia, Peeken, Ilka, Metfies, Katja
Format: Article in Journal/Newspaper
Language:English
Published: Norwegian Polar Institute 2014
Subjects:
Online Access:https://oceanrep.geomar.de/id/eprint/28020/
https://oceanrep.geomar.de/id/eprint/28020/1/2014_Kiias-etal-Insight_PolarRes-33_23466-141298-2-PB.pdf
https://oceanrep.geomar.de/id/eprint/28020/2/2014_Kilias-etal-Insight_PolRes-33_23466-141325-1-SP.pdf
https://doi.org/10.3402/polar.v33.23466
id ftoceanrep:oai:oceanrep.geomar.de:28020
record_format openpolar
spelling ftoceanrep:oai:oceanrep.geomar.de:28020 2023-05-15T14:26:56+02:00 Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing Kilias, Estelle Silvia Peeken, Ilka Metfies, Katja 2014 text https://oceanrep.geomar.de/id/eprint/28020/ https://oceanrep.geomar.de/id/eprint/28020/1/2014_Kiias-etal-Insight_PolarRes-33_23466-141298-2-PB.pdf https://oceanrep.geomar.de/id/eprint/28020/2/2014_Kilias-etal-Insight_PolRes-33_23466-141325-1-SP.pdf https://doi.org/10.3402/polar.v33.23466 en eng Norwegian Polar Institute https://oceanrep.geomar.de/id/eprint/28020/1/2014_Kiias-etal-Insight_PolarRes-33_23466-141298-2-PB.pdf https://oceanrep.geomar.de/id/eprint/28020/2/2014_Kilias-etal-Insight_PolRes-33_23466-141325-1-SP.pdf Kilias, E. S., Peeken, I. and Metfies, K. (2014) Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing. Polar Research, 33 (23466). DOI 10.3402/polar.v33.23466 <https://doi.org/10.3402/polar.v33.23466>. doi:10.3402/polar.v33.23466 cc_by_nc Article PeerReviewed 2014 ftoceanrep https://doi.org/10.3402/polar.v33.23466 2023-04-07T15:18:21Z Protists in the central Arctic Ocean are adapted to the harsh environmental conditions of its various habitats. During the Polarstern cruise ARK-XXVI/3 in 2011, at one sea-ice station, large aggregates accumulated at the bottom of the melt ponds. In this study, the protist assemblages of the bottom layer of the sea-ice and melt-pond aggregate were investigated using flow cytometry and 454-pyrosequencing. The objective is to provide a first molecular overview of protist biodiversity in these habitats and to consider the overlaps and/or differences in the community compositions. Results of flow cytometry pointed to a cell size distribution that was dominated by 3–10 µm nanoflagellates. The phylogenetic classification of all sequences was conducted at a high taxonomic level, while a selection of abundant (≥1% of total reads) sequences was further classified at a lower level. At a high taxonomic level, both habitats showed very similar community structures, dominated by chrysophytes and chlorophytes. At a lower taxonomic level, dissimilarities in the diversity of both groups were encountered in the abundant biosphere. While sea-ice chlorophytes and chrysophytes were dominated by Chlamydomonas/Chloromonas spp. and Ochromonas spp., the melt-pond aggregate was dominated by Carteria sp., Ochromonas spp. and Dinobryon faculiferum. We suppose that the similarities in richness and community structure are a consequence of melt-pond freshwater seeping through porous sea ice in late summer. Differences in the abundant biosphere nevertheless indicate that environmental conditions in both habitats vary enough to select for different dominant species. Article in Journal/Newspaper Arctic Arctic Arctic Ocean Polar Research Sea ice OceanRep (GEOMAR Helmholtz Centre für Ocean Research Kiel) Arctic Arctic Ocean Polar Research 33 1 23466
institution Open Polar
collection OceanRep (GEOMAR Helmholtz Centre für Ocean Research Kiel)
op_collection_id ftoceanrep
language English
description Protists in the central Arctic Ocean are adapted to the harsh environmental conditions of its various habitats. During the Polarstern cruise ARK-XXVI/3 in 2011, at one sea-ice station, large aggregates accumulated at the bottom of the melt ponds. In this study, the protist assemblages of the bottom layer of the sea-ice and melt-pond aggregate were investigated using flow cytometry and 454-pyrosequencing. The objective is to provide a first molecular overview of protist biodiversity in these habitats and to consider the overlaps and/or differences in the community compositions. Results of flow cytometry pointed to a cell size distribution that was dominated by 3–10 µm nanoflagellates. The phylogenetic classification of all sequences was conducted at a high taxonomic level, while a selection of abundant (≥1% of total reads) sequences was further classified at a lower level. At a high taxonomic level, both habitats showed very similar community structures, dominated by chrysophytes and chlorophytes. At a lower taxonomic level, dissimilarities in the diversity of both groups were encountered in the abundant biosphere. While sea-ice chlorophytes and chrysophytes were dominated by Chlamydomonas/Chloromonas spp. and Ochromonas spp., the melt-pond aggregate was dominated by Carteria sp., Ochromonas spp. and Dinobryon faculiferum. We suppose that the similarities in richness and community structure are a consequence of melt-pond freshwater seeping through porous sea ice in late summer. Differences in the abundant biosphere nevertheless indicate that environmental conditions in both habitats vary enough to select for different dominant species.
format Article in Journal/Newspaper
author Kilias, Estelle Silvia
Peeken, Ilka
Metfies, Katja
spellingShingle Kilias, Estelle Silvia
Peeken, Ilka
Metfies, Katja
Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
author_facet Kilias, Estelle Silvia
Peeken, Ilka
Metfies, Katja
author_sort Kilias, Estelle Silvia
title Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
title_short Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
title_full Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
title_fullStr Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
title_full_unstemmed Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing
title_sort insight into protist diversity in arctic sea ice and melt-pond aggregate obtained by pyrosequencing
publisher Norwegian Polar Institute
publishDate 2014
url https://oceanrep.geomar.de/id/eprint/28020/
https://oceanrep.geomar.de/id/eprint/28020/1/2014_Kiias-etal-Insight_PolarRes-33_23466-141298-2-PB.pdf
https://oceanrep.geomar.de/id/eprint/28020/2/2014_Kilias-etal-Insight_PolRes-33_23466-141325-1-SP.pdf
https://doi.org/10.3402/polar.v33.23466
geographic Arctic
Arctic Ocean
geographic_facet Arctic
Arctic Ocean
genre Arctic
Arctic
Arctic Ocean
Polar Research
Sea ice
genre_facet Arctic
Arctic
Arctic Ocean
Polar Research
Sea ice
op_relation https://oceanrep.geomar.de/id/eprint/28020/1/2014_Kiias-etal-Insight_PolarRes-33_23466-141298-2-PB.pdf
https://oceanrep.geomar.de/id/eprint/28020/2/2014_Kilias-etal-Insight_PolRes-33_23466-141325-1-SP.pdf
Kilias, E. S., Peeken, I. and Metfies, K. (2014) Insight into protist diversity in Arctic sea ice and melt-pond aggregate obtained by pyrosequencing. Polar Research, 33 (23466). DOI 10.3402/polar.v33.23466 <https://doi.org/10.3402/polar.v33.23466>.
doi:10.3402/polar.v33.23466
op_rights cc_by_nc
op_doi https://doi.org/10.3402/polar.v33.23466
container_title Polar Research
container_volume 33
container_issue 1
container_start_page 23466
_version_ 1766300440358551552