Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress

The production and welfare of intensively reared fish would be improved by reducing stress responsiveness. One approach to achieving this goal is selective breeding utilising stress-responsive genes as direct genetic markers of the desirable trait. As a first step in this process, microarray analysi...

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Main Authors: Pemmasani, Jhansi K., Pottinger, Tom G., Cairns, Michael T.
Other Authors: |~|
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier 2016
Subjects:
Online Access:http://hdl.handle.net/10379/5833
https://doi.org/10.13025/21593
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spelling ftnuigalway:oai:https://researchrepository.universityofgalway.ie:10379/5833 2024-09-30T14:42:10+00:00 Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress Pemmasani, Jhansi K. Pottinger, Tom G. Cairns, Michael T. |~| 2016-05-17T09:43:25Z application/pdf http://hdl.handle.net/10379/5833 https://doi.org/10.13025/21593 en eng Elsevier Comparative Biochemistry And Physiology D-Genomics & Proteomics Pemmasani, JK,Pottinger, TG,Cairns, MT (2011) 'Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress'. Comparative Biochemistry And Physiology D-Genomics & Proteomics, 6 :406-419. 1744-117X http://hdl.handle.net/10379/5833 https://doi.org/10.13025/21593 DOI 10.1016/j.cbd.2011.09.001 Attribution-NonCommercial-NoDerivs 3.0 Ireland https://creativecommons.org/licenses/by-nc-nd/3.0/ie/ Cortisol Genetic markers Liver Microarray Selective breeding Salmon salmo-salar Sparus-aurata L Confinement exposure Propiomelanocortin Lectins Protein Family Tissue Model Article 2016 ftnuigalway https://doi.org/10.13025/21593 2024-09-17T14:44:29Z The production and welfare of intensively reared fish would be improved by reducing stress responsiveness. One approach to achieving this goal is selective breeding utilising stress-responsive genes as direct genetic markers of the desirable trait. As a first step in this process, microarray analysis has been carried out on liver tissues of rainbow trout selectively bred for high (HR) or low (LR) responsiveness to a stressor. Microarray hybridizations provided gene expression profiles for pooled samples of fish confined for 6 h, 24 h and 168 h and for individual fish (168 h only). 161 genes were shown to be differentially regulated in HR and LR fish during confinement exposure and eight of these gene expression profiles were validated by quantitative PCR. Genes of particular interest included intelectin-2 precursor which showed greater than 100-fold higher expression in HR fish compared to LR fish irrespective of whether the fish were confined or not; interferon inducible transmembrane protein 3 which was differentially stress-induced between the two lines; and hepatic pro-opiomelanocortin B (POMC B) which was upregulated during stress in HR fish but downregulated in LR fish. All these offer potential as direct markers of low stress responsiveness in a marker-assisted selection scheme. (C) 2011 Elsevier Inc. All rights reserved. European Commission, the Natural Environment Research Council of the UK, and Enterprise Ireland. European Commission support was through contract no. Q5RS-2001-002211-STRESSGENES, contract no. 513692-AQUAFIRST, and a Marie Curie Host Fellowship to Jhansi K. Pemmasani (contract no. MTKD-CT-2004-013701-DIAGNOMICS). peer-reviewed Article in Journal/Newspaper Salmo salar National University of Ireland (NUI), Galway: ARAN
institution Open Polar
collection National University of Ireland (NUI), Galway: ARAN
op_collection_id ftnuigalway
language English
topic Cortisol
Genetic markers
Liver
Microarray
Selective breeding
Salmon salmo-salar
Sparus-aurata L
Confinement exposure
Propiomelanocortin
Lectins
Protein
Family
Tissue
Model
spellingShingle Cortisol
Genetic markers
Liver
Microarray
Selective breeding
Salmon salmo-salar
Sparus-aurata L
Confinement exposure
Propiomelanocortin
Lectins
Protein
Family
Tissue
Model
Pemmasani, Jhansi K.
Pottinger, Tom G.
Cairns, Michael T.
Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
topic_facet Cortisol
Genetic markers
Liver
Microarray
Selective breeding
Salmon salmo-salar
Sparus-aurata L
Confinement exposure
Propiomelanocortin
Lectins
Protein
Family
Tissue
Model
description The production and welfare of intensively reared fish would be improved by reducing stress responsiveness. One approach to achieving this goal is selective breeding utilising stress-responsive genes as direct genetic markers of the desirable trait. As a first step in this process, microarray analysis has been carried out on liver tissues of rainbow trout selectively bred for high (HR) or low (LR) responsiveness to a stressor. Microarray hybridizations provided gene expression profiles for pooled samples of fish confined for 6 h, 24 h and 168 h and for individual fish (168 h only). 161 genes were shown to be differentially regulated in HR and LR fish during confinement exposure and eight of these gene expression profiles were validated by quantitative PCR. Genes of particular interest included intelectin-2 precursor which showed greater than 100-fold higher expression in HR fish compared to LR fish irrespective of whether the fish were confined or not; interferon inducible transmembrane protein 3 which was differentially stress-induced between the two lines; and hepatic pro-opiomelanocortin B (POMC B) which was upregulated during stress in HR fish but downregulated in LR fish. All these offer potential as direct markers of low stress responsiveness in a marker-assisted selection scheme. (C) 2011 Elsevier Inc. All rights reserved. European Commission, the Natural Environment Research Council of the UK, and Enterprise Ireland. European Commission support was through contract no. Q5RS-2001-002211-STRESSGENES, contract no. 513692-AQUAFIRST, and a Marie Curie Host Fellowship to Jhansi K. Pemmasani (contract no. MTKD-CT-2004-013701-DIAGNOMICS). peer-reviewed
author2 |~|
format Article in Journal/Newspaper
author Pemmasani, Jhansi K.
Pottinger, Tom G.
Cairns, Michael T.
author_facet Pemmasani, Jhansi K.
Pottinger, Tom G.
Cairns, Michael T.
author_sort Pemmasani, Jhansi K.
title Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
title_short Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
title_full Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
title_fullStr Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
title_full_unstemmed Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress
title_sort analysis of stress-induced hepatic gene expression in rainbow trout (oncorhynchus mykiss) selected for high- and low-responsiveness to stress
publisher Elsevier
publishDate 2016
url http://hdl.handle.net/10379/5833
https://doi.org/10.13025/21593
genre Salmo salar
genre_facet Salmo salar
op_relation Comparative Biochemistry And Physiology D-Genomics & Proteomics
Pemmasani, JK,Pottinger, TG,Cairns, MT (2011) 'Analysis of stress-induced hepatic gene expression in rainbow trout (Oncorhynchus mykiss) selected for high- and low-responsiveness to stress'. Comparative Biochemistry And Physiology D-Genomics & Proteomics, 6 :406-419.
1744-117X
http://hdl.handle.net/10379/5833
https://doi.org/10.13025/21593
DOI 10.1016/j.cbd.2011.09.001
op_rights Attribution-NonCommercial-NoDerivs 3.0 Ireland
https://creativecommons.org/licenses/by-nc-nd/3.0/ie/
op_doi https://doi.org/10.13025/21593
_version_ 1811644389719539712