Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry

Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate th...

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Published in:Geoscientific Model Development
Main Authors: Yakushev, Evgeny, Protsenko, Elizaveta, Bruggeman, Jorn, Wallhead, Philip, Pakhomova, Svetlana V., Yakubov, Shamil Kh., Bellerby, Richard, Couture, Raoul-Marie
Format: Article in Journal/Newspaper
Language:English
Published: 2017
Subjects:
Online Access:http://hdl.handle.net/11250/2476451
https://doi.org/10.5194/gmd-10-453-2017
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spelling ftntnutrondheimi:oai:ntnuopen.ntnu.no:11250/2476451 2023-05-15T17:51:29+02:00 Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry Yakushev, Evgeny Protsenko, Elizaveta Bruggeman, Jorn Wallhead, Philip Pakhomova, Svetlana V. Yakubov, Shamil Kh. Bellerby, Richard Couture, Raoul-Marie 2017 http://hdl.handle.net/11250/2476451 https://doi.org/10.5194/gmd-10-453-2017 eng eng Norges forskningsråd: 244558 Geoscientific Model Development. 2017, 10 (1), 453-482. urn:issn:1991-959X http://hdl.handle.net/11250/2476451 https://doi.org/10.5194/gmd-10-453-2017 cristin:1473894 Navngivelse 4.0 Internasjonal http://creativecommons.org/licenses/by/4.0/deed.no CC-BY 453-482 10 Geoscientific Model Development 1 Journal article Peer reviewed 2017 ftntnutrondheimi https://doi.org/10.5194/gmd-10-453-2017 2019-09-17T06:53:26Z Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate the functioning of benthic and pelagic ecosystems. The redox state of the near-bottom layer in many regions can change with time, responding to the supply of organic matter, physical regime, and coastal discharge. We developed a model (BROM) to represent key biogeochemical processes in the water and sediments and to simulate changes occurring in the bottom boundary layer. BROM consists of a transport module (BROM-transport) and several biogeochemical modules that are fully compatible with the Framework for the Aquatic Biogeochemical Models, allowing independent coupling to hydrophysical models in 1-D, 2-D, or 3-D. We demonstrate that BROM is capable of simulating the seasonality in production and mineralization of organic matter as well as the mixing that leads to variations in redox conditions. BROM can be used for analyzing and interpreting data on sediment–water exchange, and for simulating the consequences of forcings such as climate change, external nutrient loading, ocean acidification, carbon storage leakage, and point-source metal pollution. publishedVersion © Author(s) 2017. This work is distributed under the Creative Commons Attribution 3.0 License. Article in Journal/Newspaper Ocean acidification NTNU Open Archive (Norwegian University of Science and Technology) Geoscientific Model Development 10 1 453 482
institution Open Polar
collection NTNU Open Archive (Norwegian University of Science and Technology)
op_collection_id ftntnutrondheimi
language English
description Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate the functioning of benthic and pelagic ecosystems. The redox state of the near-bottom layer in many regions can change with time, responding to the supply of organic matter, physical regime, and coastal discharge. We developed a model (BROM) to represent key biogeochemical processes in the water and sediments and to simulate changes occurring in the bottom boundary layer. BROM consists of a transport module (BROM-transport) and several biogeochemical modules that are fully compatible with the Framework for the Aquatic Biogeochemical Models, allowing independent coupling to hydrophysical models in 1-D, 2-D, or 3-D. We demonstrate that BROM is capable of simulating the seasonality in production and mineralization of organic matter as well as the mixing that leads to variations in redox conditions. BROM can be used for analyzing and interpreting data on sediment–water exchange, and for simulating the consequences of forcings such as climate change, external nutrient loading, ocean acidification, carbon storage leakage, and point-source metal pollution. publishedVersion © Author(s) 2017. This work is distributed under the Creative Commons Attribution 3.0 License.
format Article in Journal/Newspaper
author Yakushev, Evgeny
Protsenko, Elizaveta
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh.
Bellerby, Richard
Couture, Raoul-Marie
spellingShingle Yakushev, Evgeny
Protsenko, Elizaveta
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh.
Bellerby, Richard
Couture, Raoul-Marie
Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
author_facet Yakushev, Evgeny
Protsenko, Elizaveta
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh.
Bellerby, Richard
Couture, Raoul-Marie
author_sort Yakushev, Evgeny
title Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
title_short Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
title_full Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
title_fullStr Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
title_full_unstemmed Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
title_sort bottom redox model (brom v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
publishDate 2017
url http://hdl.handle.net/11250/2476451
https://doi.org/10.5194/gmd-10-453-2017
genre Ocean acidification
genre_facet Ocean acidification
op_source 453-482
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Geoscientific Model Development
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op_relation Norges forskningsråd: 244558
Geoscientific Model Development. 2017, 10 (1), 453-482.
urn:issn:1991-959X
http://hdl.handle.net/11250/2476451
https://doi.org/10.5194/gmd-10-453-2017
cristin:1473894
op_rights Navngivelse 4.0 Internasjonal
http://creativecommons.org/licenses/by/4.0/deed.no
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op_doi https://doi.org/10.5194/gmd-10-453-2017
container_title Geoscientific Model Development
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container_start_page 453
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