Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids

Antarctic icefish (Channichthyidae) are the only vertebrate taxon with an erythrocyte-null phenotype, and present an interesting model for studying the evolution and regulation of erythropoiesis. The gene hemogen has been identified to encode a protein which plays a role in regulating erythropoietic...

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Online Access:http://hdl.handle.net/2047/D20316418
id ftnortheast:/neu:m044c681x
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spelling ftnortheast:/neu:m044c681x 2023-08-20T04:01:29+02:00 Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids http://hdl.handle.net/2047/D20316418 unknown http://hdl.handle.net/2047/D20316418 ftnortheast 2023-07-29T22:36:34Z Antarctic icefish (Channichthyidae) are the only vertebrate taxon with an erythrocyte-null phenotype, and present an interesting model for studying the evolution and regulation of erythropoiesis. The gene hemogen has been identified to encode a protein which plays a role in regulating erythropoietic processes in vertebrates. hemogen may have been potentially impacted by the loss of globin-expression. I investigated possible relaxed selection at the hemogen locus by looking for evolutionary change to the regulatory elements or segments encoding the Hemogen protein, and assessed the evolutionary processes that drove hemogen variation among Antarctic notothenioids. While regulatory mechanisms remain intact, icefish show a significant 90bp indel in exon 3 of hemogen that would disrupt conserved modules in the Hemogen protein that are critical for erythropoiesis. Despite this, hemogen still remains expressed at low levels in adult icefish and possesses a novel splice variant that encodes a truncated protein possibly serving as a dominant negative for wild-type Hemogen. I conclude that while hemogen has undergone relaxed selection and accumulated mutations that would impact erythropoietic function in non-Antarctic fish, the observed mutations may be tolerated due to erythrocyte and hematocrit modifications in notothenioid blood phenotypes. hemogen may have a decreased-but still important-role to play in icefish, possibly functioning as a dominant negative for hemogen's role in erythropoiesis. Other/Unknown Material Antarc* Antarctic Icefish Northeastern University, Boston: DRS - Digital Repository Service Antarctic Indel’ ENVELOPE(35.282,35.282,66.963,66.963)
institution Open Polar
collection Northeastern University, Boston: DRS - Digital Repository Service
op_collection_id ftnortheast
language unknown
description Antarctic icefish (Channichthyidae) are the only vertebrate taxon with an erythrocyte-null phenotype, and present an interesting model for studying the evolution and regulation of erythropoiesis. The gene hemogen has been identified to encode a protein which plays a role in regulating erythropoietic processes in vertebrates. hemogen may have been potentially impacted by the loss of globin-expression. I investigated possible relaxed selection at the hemogen locus by looking for evolutionary change to the regulatory elements or segments encoding the Hemogen protein, and assessed the evolutionary processes that drove hemogen variation among Antarctic notothenioids. While regulatory mechanisms remain intact, icefish show a significant 90bp indel in exon 3 of hemogen that would disrupt conserved modules in the Hemogen protein that are critical for erythropoiesis. Despite this, hemogen still remains expressed at low levels in adult icefish and possesses a novel splice variant that encodes a truncated protein possibly serving as a dominant negative for wild-type Hemogen. I conclude that while hemogen has undergone relaxed selection and accumulated mutations that would impact erythropoietic function in non-Antarctic fish, the observed mutations may be tolerated due to erythrocyte and hematocrit modifications in notothenioid blood phenotypes. hemogen may have a decreased-but still important-role to play in icefish, possibly functioning as a dominant negative for hemogen's role in erythropoiesis.
title Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
spellingShingle Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
title_short Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
title_full Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
title_fullStr Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
title_full_unstemmed Relaxed selection in erythropoietic gene hemogen among high-latitude Antarctic notothenioids
title_sort relaxed selection in erythropoietic gene hemogen among high-latitude antarctic notothenioids
url http://hdl.handle.net/2047/D20316418
long_lat ENVELOPE(35.282,35.282,66.963,66.963)
geographic Antarctic
Indel’
geographic_facet Antarctic
Indel’
genre Antarc*
Antarctic
Icefish
genre_facet Antarc*
Antarctic
Icefish
op_relation http://hdl.handle.net/2047/D20316418
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